RNA–Protein interactions for RNA: ENST00000312521.8

NR1D2-201, Transcript of nuclear receptor subfamily 1 group D member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1D2, Length 5,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D2-201ENST00000312521 RARSP54136 660 aaKnown RBP22.18■■□□□ 1.14
NR1D2-201ENST00000312521 ARHGAP29Q52LW3 1261 aa22.18■■□□□ 1.14
NR1D2-201ENST00000312521 CCDC83Q8IWF9 413 aa22.18■■□□□ 1.14
NR1D2-201ENST00000312521 CCDC196A0A1B0GTZ2 297 aa22.18■■□□□ 1.14
NR1D2-201ENST00000312521 ESPNB1AK53 854 aa22.18■■□□□ 1.14
NR1D2-201ENST00000312521 MPHOSPH10O00566 681 aaKnown RBP22.18■■□□□ 1.14
NR1D2-201ENST00000312521 SCAND2PQ9GZW5 306 aaPredicted RBP22.18■■□□□ 1.14
NR1D2-201ENST00000312521 MRC2Q9UBG0 1479 aa22.18■■□□□ 1.14
NR1D2-201ENST00000312521 KIAA0754O94854 1291 aa22.17■■□□□ 1.14
NR1D2-201ENST00000312521 CAVIN4Q5BKX8 364 aa22.17■■□□□ 1.14
NR1D2-201ENST00000312521 LRRFIP2Q9Y608 721 aaKnown RBP22.17■■□□□ 1.14
NR1D2-201ENST00000312521 HECW1Q76N89 1606 aa22.17■■□□□ 1.14
NR1D2-201ENST00000312521 BOLA2Q9H3K6 86 aa22.17■■□□□ 1.14
NR1D2-201ENST00000312521 SH2B1Q9NRF2 756 aaPredicted RBP22.17■■□□□ 1.14
NR1D2-201ENST00000312521 TAF4BQ92750 862 aa22.17■■□□□ 1.14
NR1D2-201ENST00000312521 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.17■■□□□ 1.14
NR1D2-201ENST00000312521 CALRP27797 417 aaKnown RBP22.16■■□□□ 1.14
NR1D2-201ENST00000312521 ANKRD62A6NC57 917 aa22.16■■□□□ 1.14
NR1D2-201ENST00000312521 TMOD3Q9NYL9 352 aa22.16■■□□□ 1.14
NR1D2-201ENST00000312521 GOLGA6L7A0A1B0GV03 622 aa22.16■■□□□ 1.14
NR1D2-201ENST00000312521 KIAA1328Q86T90 577 aa22.16■■□□□ 1.14
NR1D2-201ENST00000312521 DESP17661 470 aa22.15■■□□□ 1.14
NR1D2-201ENST00000312521 NAPBQ9H115 298 aa22.15■■□□□ 1.14
NR1D2-201ENST00000312521 WAPLQ7Z5K2 1190 aa22.15■■□□□ 1.14
NR1D2-201ENST00000312521 CENPHQ9H3R5 247 aa22.15■■□□□ 1.14
NR1D2-201ENST00000312521 SYCE3A1L190 88 aa22.15■■□□□ 1.14
NR1D2-201ENST00000312521 MYD88Q99836 296 aa22.15■■□□□ 1.14
NR1D2-201ENST00000312521 PPP1R12BO60237 982 aaPredicted RBP22.15■■□□□ 1.14
NR1D2-201ENST00000312521 SMARCA5O60264 1052 aaPredicted RBP22.15■■□□□ 1.14
NR1D2-201ENST00000312521 ZNF397Q8NF99 534 aaPredicted RBP22.15■■□□□ 1.14
NR1D2-201ENST00000312521 SEC63Q9UGP8 760 aaKnown RBP22.15■■□□□ 1.14
NR1D2-201ENST00000312521 HMGB1P09429 215 aaKnown RBP22.14■■□□□ 1.14
NR1D2-201ENST00000312521 MINDY4BA8MYZ0 360 aa22.14■■□□□ 1.13
NR1D2-201ENST00000312521 MKNK2Q9HBH9 465 aa22.14■■□□□ 1.13
NR1D2-201ENST00000312521 ENOX2Q16206 610 aaKnown RBP22.13■■□□□ 1.13
NR1D2-201ENST00000312521 TAX1BP1Q86VP1 789 aa22.13■■□□□ 1.13
NR1D2-201ENST00000312521 POLR3DP05423 398 aaPredicted RBP22.13■■□□□ 1.13
NR1D2-201ENST00000312521 MAP3K12Q12852 859 aa22.13■■□□□ 1.13
NR1D2-201ENST00000312521 ANO10Q9NW15 660 aa22.13■■□□□ 1.13
NR1D2-201ENST00000312521 KIF2AO00139 706 aaPredicted RBP22.13■■□□□ 1.13
NR1D2-201ENST00000312521 UBXN4Q92575 508 aa22.13■■□□□ 1.13
NR1D2-201ENST00000312521 TIAM1Q13009 1591 aa22.13■■□□□ 1.13
NR1D2-201ENST00000312521 UQCRHLA0A096LP55 91 aa22.13■■□□□ 1.13
NR1D2-201ENST00000312521 UQCRHP07919 91 aa22.13■■□□□ 1.13
NR1D2-201ENST00000312521 SFPQP23246 707 aaKnown RBP eCLIP22.13■■□□□ 1.13
NR1D2-201ENST00000312521 IFIT5Q13325 482 aaKnown RBP22.13■■□□□ 1.13
NR1D2-201ENST00000312521 CTCFLQ8NI51 663 aaPredicted RBP22.12■■□□□ 1.13
NR1D2-201ENST00000312521 POLA1P09884 1462 aaPredicted RBP22.12■■□□□ 1.13
NR1D2-201ENST00000312521 CAMK4Q16566 473 aa22.12■■□□□ 1.13
NR1D2-201ENST00000312521 DNAAF4Q8WXU2 420 aa22.12■■□□□ 1.13
NR1D2-201ENST00000312521 C8orf76Q96K31 380 aa22.12■■□□□ 1.13
NR1D2-201ENST00000312521 HSP90AB3PQ58FF7 597 aa22.11■■□□□ 1.13
NR1D2-201ENST00000312521 JAKMIP3Q5VZ66 844 aa22.11■■□□□ 1.13
NR1D2-201ENST00000312521 SYNJ1O43426 1573 aa22.11■■□□□ 1.13
NR1D2-201ENST00000312521 MATR3P43243 847 aaKnown RBP eCLIP22.11■■□□□ 1.13
NR1D2-201ENST00000312521 PHAXQ9H814 394 aaKnown RBP22.11■■□□□ 1.13
NR1D2-201ENST00000312521 IL27Q8NEV9 243 aa22.11■■□□□ 1.13
NR1D2-201ENST00000312521 EZRP15311 586 aaKnown RBP22.1■■□□□ 1.13
NR1D2-201ENST00000312521 NAIPQ13075 1403 aa22.1■■□□□ 1.13
NR1D2-201ENST00000312521 ZPR1O75312 459 aa22.1■■□□□ 1.13
NR1D2-201ENST00000312521 ZSCAN30Q86W11 494 aa22.1■■□□□ 1.13
NR1D2-201ENST00000312521 POTEJP0CG39 1038 aa22.1■■□□□ 1.13
NR1D2-201ENST00000312521 TNIP1Q15025 636 aa22.1■■□□□ 1.13
NR1D2-201ENST00000312521 NME9Q86XW9 330 aa22.1■■□□□ 1.13
NR1D2-201ENST00000312521 CCDC148Q8NFR7 591 aa22.1■■□□□ 1.13
NR1D2-201ENST00000312521 CRACR2BQ8N4Y2 399 aaPredicted RBP22.1■■□□□ 1.13
NR1D2-201ENST00000312521 IQCA1Q86XH1 822 aa22.09■■□□□ 1.13
NR1D2-201ENST00000312521 DBF4Q9UBU7 674 aaPredicted RBP22.09■■□□□ 1.13
NR1D2-201ENST00000312521 CETN2P41208 172 aa22.09■■□□□ 1.13
NR1D2-201ENST00000312521 CCDC183Q5T5S1 534 aa22.09■■□□□ 1.13
NR1D2-201ENST00000312521 CCDC141Q6ZP82 1450 aa22.09■■□□□ 1.13
NR1D2-201ENST00000312521 HYPKQ9NX55 129 aa22.09■■□□□ 1.13
NR1D2-201ENST00000312521 FAM193AP78312 1265 aa22.08■■□□□ 1.13
NR1D2-201ENST00000312521 SNAPC4Q5SXM2 1469 aa22.08■■□□□ 1.13
NR1D2-201ENST00000312521 PLEKHH1Q9ULM0 1364 aa22.08■■□□□ 1.13
NR1D2-201ENST00000312521 ZSCAN12O43309 604 aa22.08■■□□□ 1.13
NR1D2-201ENST00000312521 CCDC8Q9H0W5 538 aaPredicted RBP22.08■■□□□ 1.13
NR1D2-201ENST00000312521 SPA17Q15506 151 aa22.08■■□□□ 1.13
NR1D2-201ENST00000312521 RNF41Q9H4P4 317 aaPredicted RBP22.08■■□□□ 1.13
NR1D2-201ENST00000312521 LIMCH1Q9UPQ0 1083 aa22.08■■□□□ 1.13
NR1D2-201ENST00000312521 TOPBP1Q92547 1522 aa22.08■■□□□ 1.12
NR1D2-201ENST00000312521 F6X3S4 739 aa22.08■■□□□ 1.12
NR1D2-201ENST00000312521 PIP4K2BP78356 416 aa22.08■■□□□ 1.12
NR1D2-201ENST00000312521 ZNF213O14771 459 aa22.08■■□□□ 1.12
NR1D2-201ENST00000312521 FKBP15Q5T1M5 1219 aa22.08■■□□□ 1.12
NR1D2-201ENST00000312521 DZIP1Q86YF9 867 aaKnown RBP22.08■■□□□ 1.12
NR1D2-201ENST00000312521 RAB34Q9BZG1 259 aa22.08■■□□□ 1.12
NR1D2-201ENST00000312521 GBP3Q9H0R5 595 aa22.08■■□□□ 1.12
NR1D2-201ENST00000312521 CCDC102AQ96A19 550 aa22.07■■□□□ 1.12
NR1D2-201ENST00000312521 NKTRP30414 1462 aaKnown RBP22.07■■□□□ 1.12
NR1D2-201ENST00000312521 SLC5A1P13866 664 aa22.07■■□□□ 1.12
NR1D2-201ENST00000312521 WDR97A6NE52 1622 aa22.07■■□□□ 1.12
NR1D2-201ENST00000312521 PHF8Q9UPP1 1060 aa22.07■■□□□ 1.12
NR1D2-201ENST00000312521 EMILIN1Q9Y6C2 1016 aa22.07■■□□□ 1.12
NR1D2-201ENST00000312521 TRMT112Q9UI30 125 aaKnown RBP22.07■■□□□ 1.12
NR1D2-201ENST00000312521 SLC12A7Q9Y666 1083 aa22.06■■□□□ 1.12
NR1D2-201ENST00000312521 SUPT6HQ7KZ85 1726 aaKnown RBP22.06■■□□□ 1.12
NR1D2-201ENST00000312521 SSR1P43307 286 aaKnown RBP22.06■■□□□ 1.12
NR1D2-201ENST00000312521 ZNF444Q8N0Y2 327 aaPredicted RBP22.06■■□□□ 1.12
NR1D2-201ENST00000312521 USHBP1Q8N6Y0 703 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms