RNA–Protein interactions for RNA: ENST00000309534.10

CGGBP1-201, Transcript of CGG triplet repeat binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGGBP1, Length 4,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGGBP1-201ENST00000309534 PIK3C2AO00443 1686 aa19.38■□□□□ 0.69
CGGBP1-201ENST00000309534 IL2RBP14784 551 aa19.38■□□□□ 0.69
CGGBP1-201ENST00000309534 PCDHB15Q9Y5E8 787 aa19.38■□□□□ 0.69
CGGBP1-201ENST00000309534 PCDH11XQ9BZA7 1347 aa19.38■□□□□ 0.69
CGGBP1-201ENST00000309534 PCDH11YQ9BZA8 1340 aa19.38■□□□□ 0.69
CGGBP1-201ENST00000309534 FMNL2Q96PY5 1086 aa19.38■□□□□ 0.69
CGGBP1-201ENST00000309534 ARXQ96QS3 562 aa19.38■□□□□ 0.69
CGGBP1-201ENST00000309534 TNNQ9UQP3 1299 aa19.38■□□□□ 0.69
CGGBP1-201ENST00000309534 IGHDP01880 384 aa19.37■□□□□ 0.69
CGGBP1-201ENST00000309534 INTS3Q68E01 1043 aaKnown RBP19.37■□□□□ 0.69
CGGBP1-201ENST00000309534 NOP58Q9Y2X3 529 aaKnown RBP19.37■□□□□ 0.69
CGGBP1-201ENST00000309534 MYT1Q01538 1121 aa19.37■□□□□ 0.69
CGGBP1-201ENST00000309534 DDX54Q8TDD1 881 aaKnown RBP19.37■□□□□ 0.69
CGGBP1-201ENST00000309534 IPO9Q96P70 1041 aaKnown RBP19.37■□□□□ 0.69
CGGBP1-201ENST00000309534 C1orf115Q9H7X2 142 aa19.36■□□□□ 0.69
CGGBP1-201ENST00000309534 RGPD8O14715 1765 aaPredicted RBP19.36■□□□□ 0.69
CGGBP1-201ENST00000309534 ABCC4O15439 1325 aa19.36■□□□□ 0.69
CGGBP1-201ENST00000309534 APBB1O00213 710 aa19.36■□□□□ 0.69
CGGBP1-201ENST00000309534 LNPKQ9C0E8 428 aa19.36■□□□□ 0.69
CGGBP1-201ENST00000309534 USP35Q9P2H5 1018 aa19.36■□□□□ 0.69
CGGBP1-201ENST00000309534 CHD1LQ86WJ1 897 aa19.35■□□□□ 0.69
CGGBP1-201ENST00000309534 KRT24Q2M2I5 525 aa19.35■□□□□ 0.69
CGGBP1-201ENST00000309534 GPATCH3Q96I76 525 aa19.34■□□□□ 0.69
CGGBP1-201ENST00000309534 DNAAF4Q8WXU2 420 aa19.33■□□□□ 0.69
CGGBP1-201ENST00000309534 SNRPA1P09661 255 aaKnown RBP19.33■□□□□ 0.69
CGGBP1-201ENST00000309534 LGR6Q9HBX8 967 aa19.33■□□□□ 0.69
CGGBP1-201ENST00000309534 ZBTB7BO15156 539 aaPredicted RBP19.33■□□□□ 0.68
CGGBP1-201ENST00000309534 PIP4K2BP78356 416 aa19.33■□□□□ 0.68
CGGBP1-201ENST00000309534 CRB1P82279 1406 aa19.33■□□□□ 0.68
CGGBP1-201ENST00000309534 WDR17Q8IZU2 1322 aa19.33■□□□□ 0.68
CGGBP1-201ENST00000309534 EIF4A1P60842 406 aaKnown RBP19.32■□□□□ 0.68
CGGBP1-201ENST00000309534 AIMP1Q12904 312 aaKnown RBP19.32■□□□□ 0.68
CGGBP1-201ENST00000309534 TMOD3Q9NYL9 352 aa19.31■□□□□ 0.68
CGGBP1-201ENST00000309534 SLC52A2Q9HAB3 445 aa19.31■□□□□ 0.68
CGGBP1-201ENST00000309534 SOS2Q07890 1332 aaPredicted RBP19.31■□□□□ 0.68
CGGBP1-201ENST00000309534 LARP1Q6PKG0 1096 aaKnown RBP19.31■□□□□ 0.68
CGGBP1-201ENST00000309534 PHKG2P15735 406 aa19.31■□□□□ 0.68
CGGBP1-201ENST00000309534 CPDO75976 1380 aa19.3■□□□□ 0.68
CGGBP1-201ENST00000309534 CARD10Q9BWT7 1032 aa19.3■□□□□ 0.68
CGGBP1-201ENST00000309534 HSP90AA1P07900 732 aaKnown RBP19.3■□□□□ 0.68
CGGBP1-201ENST00000309534 CDCA7Q9BWT1 371 aaPredicted RBP19.3■□□□□ 0.68
CGGBP1-201ENST00000309534 F6X3S4 739 aa19.3■□□□□ 0.68
CGGBP1-201ENST00000309534 SMC5Q8IY18 1101 aa19.3■□□□□ 0.68
CGGBP1-201ENST00000309534 TEX13AQ9BXU3 409 aaPredicted RBP19.29■□□□□ 0.68
CGGBP1-201ENST00000309534 EXOC5O00471 708 aa19.29■□□□□ 0.68
CGGBP1-201ENST00000309534 ANKRD44Q8N8A2 993 aa19.29■□□□□ 0.68
CGGBP1-201ENST00000309534 SLIT3O75094 1523 aa19.29■□□□□ 0.68
CGGBP1-201ENST00000309534 PLEKHG2Q9H7P9 1386 aa19.29■□□□□ 0.68
CGGBP1-201ENST00000309534 AXIN2Q9Y2T1 843 aa19.29■□□□□ 0.68
CGGBP1-201ENST00000309534 NUTM2BA6NNL0 878 aaPredicted RBP19.29■□□□□ 0.68
CGGBP1-201ENST00000309534 NUTM2EB1AL46 878 aaPredicted RBP19.29■□□□□ 0.68
CGGBP1-201ENST00000309534 NUTM2AQ8IVF1 878 aaPredicted RBP19.29■□□□□ 0.68
CGGBP1-201ENST00000309534 ZNF330Q9Y3S2 320 aaPredicted RBP19.29■□□□□ 0.68
CGGBP1-201ENST00000309534 CHPF2Q9P2E5 772 aa19.28■□□□□ 0.68
CGGBP1-201ENST00000309534 ALDH1L1O75891 902 aa19.27■□□□□ 0.68
CGGBP1-201ENST00000309534 ZNF790Q6PG37 636 aa19.27■□□□□ 0.68
CGGBP1-201ENST00000309534 NFAT5O94916 1531 aa19.27■□□□□ 0.67
CGGBP1-201ENST00000309534 MCCP23508 829 aa19.27■□□□□ 0.67
CGGBP1-201ENST00000309534 MFAP1P55081 439 aaKnown RBP19.27■□□□□ 0.67
CGGBP1-201ENST00000309534 NFATC2IPQ8NCF5 419 aa19.27■□□□□ 0.67
CGGBP1-201ENST00000309534 NUCB1Q02818 461 aa19.26■□□□□ 0.67
CGGBP1-201ENST00000309534 ERC1Q8IUD2 1116 aa19.26■□□□□ 0.67
CGGBP1-201ENST00000309534 SYTL4Q96C24 671 aaPredicted RBP19.26■□□□□ 0.67
CGGBP1-201ENST00000309534 BTG4Q9NY30 223 aa19.26■□□□□ 0.67
CGGBP1-201ENST00000309534 UBAP1LF5GYI3 381 aa19.26■□□□□ 0.67
CGGBP1-201ENST00000309534 OVOS2A0A0G2JMS6 1433 aa19.26■□□□□ 0.67
CGGBP1-201ENST00000309534 MEX3CQ5U5Q3 659 aaKnown RBP19.25■□□□□ 0.67
CGGBP1-201ENST00000309534 PEAK1Q9H792 1746 aa19.25■□□□□ 0.67
CGGBP1-201ENST00000309534 ERVV-2B6SEH9 535 aa19.25■□□□□ 0.67
CGGBP1-201ENST00000309534 DDX21Q9NR30 783 aaKnown RBP eCLIP19.25■□□□□ 0.67
CGGBP1-201ENST00000309534 MYL6BP14649 208 aa19.25■□□□□ 0.67
CGGBP1-201ENST00000309534 KSR2Q6VAB6 950 aa19.25■□□□□ 0.67
CGGBP1-201ENST00000309534 LRRCC1Q9C099 1032 aa19.25■□□□□ 0.67
CGGBP1-201ENST00000309534 ADAMTS2O95450 1211 aa19.24■□□□□ 0.67
CGGBP1-201ENST00000309534 G3BP1Q13283 466 aaKnown RBP eCLIP19.24■□□□□ 0.67
CGGBP1-201ENST00000309534 PI4KAP2A4QPH2 592 aa19.24■□□□□ 0.67
CGGBP1-201ENST00000309534 RAB11FIP3O75154 756 aa19.24■□□□□ 0.67
CGGBP1-201ENST00000309534 STARD3NLO95772 234 aa19.24■□□□□ 0.67
CGGBP1-201ENST00000309534 PI4KAP1Q8N8J0 262 aa19.24■□□□□ 0.67
CGGBP1-201ENST00000309534 MEIS3Q99687 375 aa19.24■□□□□ 0.67
CGGBP1-201ENST00000309534 CDC45O75419 566 aa19.23■□□□□ 0.67
CGGBP1-201ENST00000309534 KIF6Q6ZMV9 814 aa19.23■□□□□ 0.67
CGGBP1-201ENST00000309534 G2E3Q7L622 706 aa19.23■□□□□ 0.67
CGGBP1-201ENST00000309534 HSCBQ8IWL3 235 aa19.23■□□□□ 0.67
CGGBP1-201ENST00000309534 SURF6O75683 361 aaKnown RBP19.22■□□□□ 0.67
CGGBP1-201ENST00000309534 RBM42Q9BTD8 480 aaKnown RBP19.22■□□□□ 0.67
CGGBP1-201ENST00000309534 CEMIPQ8WUJ3 1361 aa19.22■□□□□ 0.67
CGGBP1-201ENST00000309534 MAP3K2Q9Y2U5 619 aa19.22■□□□□ 0.67
CGGBP1-201ENST00000309534 GIGYF1O75420 1035 aaPredicted RBP19.21■□□□□ 0.67
CGGBP1-201ENST00000309534 SLC39A6Q13433 755 aa19.21■□□□□ 0.67
CGGBP1-201ENST00000309534 TRIM6-TRIM34B2RNG4 842 aa19.21■□□□□ 0.67
CGGBP1-201ENST00000309534 DCTPP1Q9H773 170 aa19.21■□□□□ 0.67
CGGBP1-201ENST00000309534 CEP85Q6P2H3 762 aa19.2■□□□□ 0.66
CGGBP1-201ENST00000309534 CHMP3Q9Y3E7 222 aa19.2■□□□□ 0.66
CGGBP1-201ENST00000309534 LRRFIP2Q9Y608 721 aaKnown RBP19.2■□□□□ 0.66
CGGBP1-201ENST00000309534 ERC2O15083 957 aa19.19■□□□□ 0.66
CGGBP1-201ENST00000309534 SRGAP3O43295 1099 aa19.19■□□□□ 0.66
CGGBP1-201ENST00000309534 REC8O95072 547 aa19.19■□□□□ 0.66
CGGBP1-201ENST00000309534 LINS1Q8NG48 757 aa19.19■□□□□ 0.66
CGGBP1-201ENST00000309534 LTN1O94822 1766 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms