RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 TSHZ3Q63HK5 1081 aa6.25□□□□□ -1.41
CAST-201ENST00000309190 RIC3Q7Z5B4 369 aa6.25□□□□□ -1.41
CAST-201ENST00000309190 DNAJC10Q8IXB1 793 aa6.25□□□□□ -1.41
CAST-201ENST00000309190 LTBP4Q8N2S1 1624 aa6.25□□□□□ -1.41
CAST-201ENST00000309190 CD163L1Q9NR16 1453 aa6.25□□□□□ -1.41
CAST-201ENST00000309190 SYNE4Q8N205 404 aa6.25□□□□□ -1.41
CAST-201ENST00000309190 SPG7Q9UQ90 795 aa6.25□□□□□ -1.41
CAST-201ENST00000309190 USP54Q70EL1 1684 aa6.25□□□□□ -1.41
CAST-201ENST00000309190 NKTRP30414 1462 aaKnown RBP6.25□□□□□ -1.41
CAST-201ENST00000309190 AKAP12Q02952 1782 aa6.25□□□□□ -1.41
CAST-201ENST00000309190 EN1Q05925 392 aaPredicted RBP6.25□□□□□ -1.41
CAST-201ENST00000309190 CWF19L2Q2TBE0 894 aaKnown RBP6.25□□□□□ -1.41
CAST-201ENST00000309190 NRXN3Q9Y4C0 1643 aa6.25□□□□□ -1.41
CAST-201ENST00000309190 MED1Q15648 1581 aaPredicted RBP6.25□□□□□ -1.41
CAST-201ENST00000309190 RLBP1P12271 317 aa6.25□□□□□ -1.41
CAST-201ENST00000309190 MYH16Q9H6N6 1097 aa6.25□□□□□ -1.41
CAST-201ENST00000309190 ZBTB47Q9UFB7 747 aaPredicted RBP6.25□□□□□ -1.41
CAST-201ENST00000309190 JAG2Q9Y219 1238 aa6.25□□□□□ -1.41
CAST-201ENST00000309190 MON2Q7Z3U7 1717 aa6.25□□□□□ -1.41
CAST-201ENST00000309190 CEP350Q5VT06 3117 aa6.24□□□□□ -1.41
CAST-201ENST00000309190 POTEAQ6S8J7 498 aa6.24□□□□□ -1.41
CAST-201ENST00000309190 KLHDC4Q8TBB5 520 aa6.24□□□□□ -1.41
CAST-201ENST00000309190 IFNL2Q8IZJ0 200 aa6.24□□□□□ -1.41
CAST-201ENST00000309190 FLT4P35916 1363 aa6.24□□□□□ -1.41
CAST-201ENST00000309190 TOPAZ1Q8N9V7 1692 aa6.24□□□□□ -1.41
CAST-201ENST00000309190 PI4KAP2A4QPH2 592 aa6.24□□□□□ -1.41
CAST-201ENST00000309190 PI4KAP1Q8N8J0 262 aa6.24□□□□□ -1.41
CAST-201ENST00000309190 GAS2L2Q8NHY3 880 aa6.24□□□□□ -1.41
CAST-201ENST00000309190 TTC21AQ8NDW8 1320 aa6.23□□□□□ -1.41
CAST-201ENST00000309190 RGL2O15211 777 aa6.23□□□□□ -1.41
CAST-201ENST00000309190 MAPK8IP2Q13387 824 aaPredicted RBP6.23□□□□□ -1.41
CAST-201ENST00000309190 TAF7Q15545 349 aaPredicted RBP6.23□□□□□ -1.41
CAST-201ENST00000309190 PDGFDQ9GZP0 370 aaPredicted RBP6.23□□□□□ -1.41
CAST-201ENST00000309190 C9orf78Q9NZ63 289 aaPredicted RBP6.23□□□□□ -1.41
CAST-201ENST00000309190 CENPFP49454 3210 aa6.23□□□□□ -1.41
CAST-201ENST00000309190 CRYBG1Q9Y4K1 1723 aa6.23□□□□□ -1.41
CAST-201ENST00000309190 ATP7BP35670 1465 aa6.23□□□□□ -1.41
CAST-201ENST00000309190 MAP4K4O95819 1239 aaPredicted RBP6.23□□□□□ -1.41
CAST-201ENST00000309190 COPS6Q7L5N1 327 aa6.23□□□□□ -1.41
CAST-201ENST00000309190 NUTM1Q86Y26 1132 aa6.23□□□□□ -1.41
CAST-201ENST00000309190 DTNBO60941 627 aa6.23□□□□□ -1.41
CAST-201ENST00000309190 SF3B2Q13435 895 aaKnown RBP6.23□□□□□ -1.41
CAST-201ENST00000309190 STK11IPQ8N1F8 1099 aa6.23□□□□□ -1.41
CAST-201ENST00000309190 TFCP2L1Q9NZI6 479 aa6.23□□□□□ -1.41
CAST-201ENST00000309190 IQSEC3Q9UPP2 1182 aaPredicted RBP6.23□□□□□ -1.41
CAST-201ENST00000309190 ATF5Q9Y2D1 282 aaPredicted RBP6.23□□□□□ -1.41
CAST-201ENST00000309190 EDC4Q6P2E9 1401 aaKnown RBP6.23□□□□□ -1.41
CAST-201ENST00000309190 RXRBP28702 533 aa6.22□□□□□ -1.41
CAST-201ENST00000309190 MARCH10Q8NA82 808 aaPredicted RBP6.22□□□□□ -1.41
CAST-201ENST00000309190 PIGBQ92521 554 aa6.22□□□□□ -1.41
CAST-201ENST00000309190 SIRT1Q96EB6 747 aa6.22□□□□□ -1.41
CAST-201ENST00000309190 ANTXR1Q9H6X2 564 aa6.22□□□□□ -1.41
CAST-201ENST00000309190 REREQ9P2R6 1566 aa6.22□□□□□ -1.41
CAST-201ENST00000309190 E9PSI1 815 aa6.22□□□□□ -1.41
CAST-201ENST00000309190 SNAP23O00161 211 aa6.22□□□□□ -1.41
CAST-201ENST00000309190 PDE4AP27815 886 aa6.22□□□□□ -1.41
CAST-201ENST00000309190 IL1RAPL2Q9NP60 686 aa6.22□□□□□ -1.41
CAST-201ENST00000309190 LRRC7Q96NW7 1537 aa6.22□□□□□ -1.41
CAST-201ENST00000309190 GNPATO15228 680 aa6.22□□□□□ -1.41
CAST-201ENST00000309190 SLFN5Q08AF3 891 aa6.22□□□□□ -1.41
CAST-201ENST00000309190 TTLL7Q6ZT98 887 aa6.22□□□□□ -1.41
CAST-201ENST00000309190 UNC5CLQ8IV45 518 aa6.22□□□□□ -1.41
CAST-201ENST00000309190 TMEM57Q8N5G2 664 aa6.22□□□□□ -1.41
CAST-201ENST00000309190 HELBQ8NG08 1087 aaPredicted RBP6.22□□□□□ -1.41
CAST-201ENST00000309190 PNNQ9H307 717 aaKnown RBP6.22□□□□□ -1.41
CAST-201ENST00000309190 SMARCA5O60264 1052 aaPredicted RBP6.22□□□□□ -1.41
CAST-201ENST00000309190 DDIT3P35638 169 aa6.22□□□□□ -1.41
CAST-201ENST00000309190 GNAI1P63096 354 aa6.22□□□□□ -1.41
CAST-201ENST00000309190 XAGE3Q8WTP9 111 aa6.22□□□□□ -1.41
CAST-201ENST00000309190 MYD88Q99836 296 aa6.22□□□□□ -1.41
CAST-201ENST00000309190 LNPKQ9C0E8 428 aa6.22□□□□□ -1.41
CAST-201ENST00000309190 SRP68Q9UHB9 627 aaKnown RBP6.22□□□□□ -1.41
CAST-201ENST00000309190 RNMTO43148 476 aaKnown RBP6.21□□□□□ -1.41
CAST-201ENST00000309190 IGSF3O75054 1194 aa6.21□□□□□ -1.41
CAST-201ENST00000309190 ZBTB7AO95365 584 aa6.21□□□□□ -1.41
CAST-201ENST00000309190 FBXW7Q969H0 707 aa6.21□□□□□ -1.41
CAST-201ENST00000309190 MST1RQ04912 1400 aa6.21□□□□□ -1.41
CAST-201ENST00000309190 FAM89AQ96GI7 184 aa6.21□□□□□ -1.42
CAST-201ENST00000309190 GJD4Q96KN9 370 aaPredicted RBP6.21□□□□□ -1.42
CAST-201ENST00000309190 EXOC6BQ9Y2D4 811 aa6.21□□□□□ -1.42
CAST-201ENST00000309190 LRRC37A3O60309 1634 aa6.21□□□□□ -1.42
CAST-201ENST00000309190 HCLS1P14317 486 aaPredicted RBP6.21□□□□□ -1.42
CAST-201ENST00000309190 PHKG2P15735 406 aa6.21□□□□□ -1.42
CAST-201ENST00000309190 BRPF1P55201 1214 aaPredicted RBP6.21□□□□□ -1.42
CAST-201ENST00000309190 POLR3AO14802 1390 aaPredicted RBP6.21□□□□□ -1.42
CAST-201ENST00000309190 CDK11BP21127 795 aaKnown RBP6.2□□□□□ -1.42
CAST-201ENST00000309190 SLC4A8Q2Y0W8 1093 aa6.2□□□□□ -1.42
CAST-201ENST00000309190 ZNF790Q6PG37 636 aa6.2□□□□□ -1.42
CAST-201ENST00000309190 NDUFB9Q9Y6M9 179 aa6.2□□□□□ -1.42
CAST-201ENST00000309190 SOS2Q07890 1332 aaPredicted RBP6.2□□□□□ -1.42
CAST-201ENST00000309190 UBR1Q8IWV7 1749 aa6.2□□□□□ -1.42
CAST-201ENST00000309190 UBE3BQ7Z3V4 1068 aa6.2□□□□□ -1.42
CAST-201ENST00000309190 SBNO1A3KN83 1393 aa6.2□□□□□ -1.42
CAST-201ENST00000309190 WDR17Q8IZU2 1322 aa6.2□□□□□ -1.42
CAST-201ENST00000309190 TECPR2O15040 1411 aa6.2□□□□□ -1.42
CAST-201ENST00000309190 TAF7LQ5H9L4 462 aa6.2□□□□□ -1.42
CAST-201ENST00000309190 ANKRD45Q5TZF3 282 aa6.2□□□□□ -1.42
CAST-201ENST00000309190 PLEKHF1Q96S99 279 aa6.2□□□□□ -1.42
CAST-201ENST00000309190 CCNL1Q9UK58 526 aaPredicted RBP6.2□□□□□ -1.42
CAST-201ENST00000309190 ZBTB1Q9Y2K1 713 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms