RNA–Protein interactions for RNA: ENST00000308394.8

CASP3-201, Transcript of caspase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP3, Length 2,673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP3-201ENST00000308394 TWISTNBQ3B726 338 aaPredicted RBP13.73□□□□□ -0.21
CASP3-201ENST00000308394 C20orf194Q5TEA3 1177 aa13.73□□□□□ -0.21
CASP3-201ENST00000308394 C8orf58Q8NAV2 365 aa13.73□□□□□ -0.21
CASP3-201ENST00000308394 CARD10Q9BWT7 1032 aa13.73□□□□□ -0.21
CASP3-201ENST00000308394 TAF7Q15545 349 aaPredicted RBP13.72□□□□□ -0.21
CASP3-201ENST00000308394 SSH1Q8WYL5 1049 aa13.72□□□□□ -0.21
CASP3-201ENST00000308394 VAMP4O75379 141 aa13.71□□□□□ -0.21
CASP3-201ENST00000308394 TEFQ10587 303 aa13.71□□□□□ -0.21
CASP3-201ENST00000308394 EXOC6Q8TAG9 804 aa13.71□□□□□ -0.21
CASP3-201ENST00000308394 PPP4R2Q9NY27 417 aa13.71□□□□□ -0.21
CASP3-201ENST00000308394 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.71□□□□□ -0.212e-8■■□□□ 13
CASP3-201ENST00000308394 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.71□□□□□ -0.21
CASP3-201ENST00000308394 KRT24Q2M2I5 525 aa13.71□□□□□ -0.22
CASP3-201ENST00000308394 PRDM10Q9NQV6 1147 aa13.71□□□□□ -0.22
CASP3-201ENST00000308394 RNMTO43148 476 aaKnown RBP13.7□□□□□ -0.22
CASP3-201ENST00000308394 IL2RBP14784 551 aa13.7□□□□□ -0.22
CASP3-201ENST00000308394 IFNL2Q8IZJ0 200 aa13.7□□□□□ -0.22
CASP3-201ENST00000308394 CRBNQ96SW2 442 aa13.7□□□□□ -0.22
CASP3-201ENST00000308394 CEMIPQ8WUJ3 1361 aa13.7□□□□□ -0.22
CASP3-201ENST00000308394 COL14A1Q05707 1796 aaKnown RBP13.69□□□□□ -0.22
CASP3-201ENST00000308394 PHKG2P15735 406 aa13.69□□□□□ -0.22
CASP3-201ENST00000308394 TCERG1O14776 1098 aaKnown RBP13.69□□□□□ -0.22
CASP3-201ENST00000308394 ZNF592Q92610 1267 aa13.69□□□□□ -0.22
CASP3-201ENST00000308394 ZNF428Q96B54 188 aa13.69□□□□□ -0.22
CASP3-201ENST00000308394 JCADQ9P266 1359 aa13.69□□□□□ -0.22
CASP3-201ENST00000308394 ALDH1L2Q3SY69 923 aa13.68□□□□□ -0.22
CASP3-201ENST00000308394 CNPY4Q8N129 248 aa13.68□□□□□ -0.22
CASP3-201ENST00000308394 ZCRB1Q8TBF4 217 aaKnown RBP13.68□□□□□ -0.22
CASP3-201ENST00000308394 BTBD11A6QL63 1104 aa13.67□□□□□ -0.22
CASP3-201ENST00000308394 CYP27B1O15528 508 aa13.67□□□□□ -0.22
CASP3-201ENST00000308394 B4GALNT3Q6L9W6 998 aa13.67□□□□□ -0.22
CASP3-201ENST00000308394 TMED8Q6PL24 325 aaPredicted RBP13.67□□□□□ -0.22
CASP3-201ENST00000308394 TICAM2Q86XR7 235 aa13.67□□□□□ -0.22
CASP3-201ENST00000308394 OVOS2A0A0G2JMS6 1433 aa13.67□□□□□ -0.22
CASP3-201ENST00000308394 CLUAP1Q96AJ1 413 aa13.67□□□□□ -0.22
CASP3-201ENST00000308394 BABAM1Q9NWV8 329 aa13.67□□□□□ -0.22
CASP3-201ENST00000308394 NOB1Q9ULX3 412 aaKnown RBP13.67□□□□□ -0.22
CASP3-201ENST00000308394 ZKSCAN2Q63HK3 967 aa13.67□□□□□ -0.22
CASP3-201ENST00000308394 DDX54Q8TDD1 881 aaKnown RBP13.67□□□□□ -0.22
CASP3-201ENST00000308394 PANK1Q8TE04 598 aa13.67□□□□□ -0.22
CASP3-201ENST00000308394 LRRC37A3O60309 1634 aa13.66□□□□□ -0.22
CASP3-201ENST00000308394 HSPA1LP34931 641 aa13.66□□□□□ -0.22
CASP3-201ENST00000308394 PDE3AQ14432 1141 aa13.66□□□□□ -0.22
CASP3-201ENST00000308394 PLEKHG2Q9H7P9 1386 aa13.66□□□□□ -0.22
CASP3-201ENST00000308394 C8orf37Q96NL8 207 aa13.66□□□□□ -0.22
CASP3-201ENST00000308394 CHMP4BQ9H444 224 aaKnown RBP13.66□□□□□ -0.22
CASP3-201ENST00000308394 PCDH11XQ9BZA7 1347 aa13.65□□□□□ -0.22
CASP3-201ENST00000308394 PCDH11YQ9BZA8 1340 aa13.65□□□□□ -0.22
CASP3-201ENST00000308394 HSP90AB1P08238 724 aaKnown RBP13.65□□□□□ -0.22
CASP3-201ENST00000308394 DCAF5Q96JK2 942 aa13.65□□□□□ -0.22
CASP3-201ENST00000308394 TNNQ9UQP3 1299 aa13.65□□□□□ -0.22
CASP3-201ENST00000308394 KIF16BQ96L93 1317 aa13.65□□□□□ -0.22
CASP3-201ENST00000308394 NCLP19338 710 aaKnown RBP13.65□□□□□ -0.22
CASP3-201ENST00000308394 FTSJ3Q8IY81 847 aaKnown RBP13.65□□□□□ -0.22
CASP3-201ENST00000308394 NGLY1Q96IV0 654 aa13.65□□□□□ -0.22
CASP3-201ENST00000308394 IPO8O15397 1037 aaKnown RBP13.64□□□□□ -0.23
CASP3-201ENST00000308394 MRPL50Q8N5N7 158 aaKnown RBP13.64□□□□□ -0.23
CASP3-201ENST00000308394 COG6Q9Y2V7 657 aa13.64□□□□□ -0.23
CASP3-201ENST00000308394 NFATC2IPQ8NCF5 419 aa13.64□□□□□ -0.23
CASP3-201ENST00000308394 PARP4Q9UKK3 1724 aaKnown RBP13.63□□□□□ -0.23
CASP3-201ENST00000308394 KCNQ3O43525 872 aa13.63□□□□□ -0.23
CASP3-201ENST00000308394 ATF7IPQ6VMQ6 1270 aa13.63□□□□□ -0.23
CASP3-201ENST00000308394 SLC52A2Q9HAB3 445 aa13.63□□□□□ -0.23
CASP3-201ENST00000308394 KDM6AO15550 1401 aaPredicted RBP13.63□□□□□ -0.23
CASP3-201ENST00000308394 TRIM27P14373 513 aa13.63□□□□□ -0.23
CASP3-201ENST00000308394 DZIP1LQ8IYY4 767 aaKnown RBP13.63□□□□□ -0.23
CASP3-201ENST00000308394 PLCH1Q4KWH8 1693 aa13.62□□□□□ -0.23
CASP3-201ENST00000308394 PKD1L3Q7Z443 1732 aa13.62□□□□□ -0.23
CASP3-201ENST00000308394 MS4A1P11836 297 aa13.62□□□□□ -0.23
CASP3-201ENST00000308394 RLBP1P12271 317 aa13.62□□□□□ -0.23
CASP3-201ENST00000308394 NECTIN2Q92692 538 aa13.62□□□□□ -0.23
CASP3-201ENST00000308394 SPATA31A6Q5VVP1 1343 aa13.62□□□□□ -0.23
CASP3-201ENST00000308394 BRPF1P55201 1214 aaPredicted RBP13.62□□□□□ -0.23
CASP3-201ENST00000308394 CABP4P57796 275 aa13.62□□□□□ -0.23
CASP3-201ENST00000308394 EIF4A1P60842 406 aaKnown RBP13.62□□□□□ -0.23
CASP3-201ENST00000308394 SLC4A2P04920 1241 aa13.61□□□□□ -0.23
CASP3-201ENST00000308394 MEX3CQ5U5Q3 659 aaKnown RBP13.61□□□□□ -0.23
CASP3-201ENST00000308394 SECISBP2LQ93073 1101 aaKnown RBP13.61□□□□□ -0.23
CASP3-201ENST00000308394 SPATA31A1Q5TZJ5 1347 aa13.6□□□□□ -0.23
CASP3-201ENST00000308394 EXOC5O00471 708 aa13.6□□□□□ -0.23
CASP3-201ENST00000308394 SLC39A6Q13433 755 aa13.6□□□□□ -0.23
CASP3-201ENST00000308394 UNC5CLQ8IV45 518 aa13.6□□□□□ -0.23
CASP3-201ENST00000308394 CCDC30Q5VVM6 783 aa13.6□□□□□ -0.23
CASP3-201ENST00000308394 STK31Q9BXU1 1019 aa13.6□□□□□ -0.23
CASP3-201ENST00000308394 SLIT2O94813 1529 aa13.6□□□□□ -0.23
CASP3-201ENST00000308394 EIF2S2P20042 333 aaKnown RBP13.59□□□□□ -0.23
CASP3-201ENST00000308394 TEX2Q8IWB9 1127 aa13.59□□□□□ -0.23
CASP3-201ENST00000308394 TSHZ2Q9NRE2 1034 aa13.59□□□□□ -0.23
CASP3-201ENST00000308394 VIRMAQ69YN4 1812 aaKnown RBP13.59□□□□□ -0.23
CASP3-201ENST00000308394 ZNF790Q6PG37 636 aa13.59□□□□□ -0.23
CASP3-201ENST00000308394 THRAP3Q9Y2W1 955 aaKnown RBP13.59□□□□□ -0.23
CASP3-201ENST00000308394 HDGFL1Q5TGJ6 251 aa13.58□□□□□ -0.23
CASP3-201ENST00000308394 ITPRIPQ8IWB1 547 aa13.58□□□□□ -0.23
CASP3-201ENST00000308394 IPO4Q8TEX9 1081 aaKnown RBP13.58□□□□□ -0.23
CASP3-201ENST00000308394 ARHGAP45Q92619 1136 aa13.58□□□□□ -0.23
CASP3-201ENST00000308394 SOS1Q07889 1333 aaPredicted RBP13.58□□□□□ -0.24
CASP3-201ENST00000308394 SPATA31A5Q5VU36 1347 aa13.58□□□□□ -0.24
CASP3-201ENST00000308394 SPATA31A7Q8IWB4 1347 aa13.58□□□□□ -0.24
CASP3-201ENST00000308394 NKX1-1Q15270 411 aaPredicted RBP13.58□□□□□ -0.24
CASP3-201ENST00000308394 TTC5Q8N0Z6 440 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms