RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 COL3A1P02461 1466 aaPredicted RBP19.77■□□□□ 0.76
CCDC8-201ENST00000307522 CCDC27Q2M243 656 aa19.77■□□□□ 0.76
CCDC8-201ENST00000307522 TMEM51Q9NW97 253 aa19.77■□□□□ 0.76
CCDC8-201ENST00000307522 USP25Q9UHP3 1055 aa19.77■□□□□ 0.76
CCDC8-201ENST00000307522 TWISTNBQ3B726 338 aaPredicted RBP19.77■□□□□ 0.75
CCDC8-201ENST00000307522 ATF7IPQ6VMQ6 1270 aa19.77■□□□□ 0.75
CCDC8-201ENST00000307522 MAP2P11137 1827 aaKnown RBP19.77■□□□□ 0.75
CCDC8-201ENST00000307522 LRRC59Q96AG4 307 aaKnown RBP19.76■□□□□ 0.75
CCDC8-201ENST00000307522 BCL2L12Q9HB09 334 aa19.76■□□□□ 0.75
CCDC8-201ENST00000307522 NUCB1Q02818 461 aa19.76■□□□□ 0.75
CCDC8-201ENST00000307522 EYA1Q99502 592 aa19.76■□□□□ 0.75
CCDC8-201ENST00000307522 PTMSP20962 102 aa19.76■□□□□ 0.75
CCDC8-201ENST00000307522 REREQ9P2R6 1566 aa19.75■□□□□ 0.75
CCDC8-201ENST00000307522 LRRC7Q96NW7 1537 aa19.75■□□□□ 0.75
CCDC8-201ENST00000307522 MTHFSDQ2M296 383 aaKnown RBP19.75■□□□□ 0.75
CCDC8-201ENST00000307522 HS1BP3Q53T59 392 aa19.75■□□□□ 0.75
CCDC8-201ENST00000307522 HDAC1Q13547 482 aaPredicted RBP19.75■□□□□ 0.75
CCDC8-201ENST00000307522 LRSAM1Q6UWE0 723 aa19.75■□□□□ 0.75
CCDC8-201ENST00000307522 DDX19BQ9UMR2 479 aa19.75■□□□□ 0.75
CCDC8-201ENST00000307522 UBR1Q8IWV7 1749 aa19.74■□□□□ 0.75
CCDC8-201ENST00000307522 SLC4A10Q6U841 1118 aa19.74■□□□□ 0.75
CCDC8-201ENST00000307522 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.74■□□□□ 0.75
CCDC8-201ENST00000307522 PNPLA6Q8IY17 1366 aa19.74■□□□□ 0.75
CCDC8-201ENST00000307522 ZDHHC9Q9Y397 364 aa19.74■□□□□ 0.75
CCDC8-201ENST00000307522 PLEKHG3A1L390 1219 aa19.73■□□□□ 0.75
CCDC8-201ENST00000307522 VAMP4O75379 141 aa19.73■□□□□ 0.75
CCDC8-201ENST00000307522 PHF8Q9UPP1 1060 aa19.73■□□□□ 0.75
CCDC8-201ENST00000307522 ZC3H6P61129 1189 aaKnown RBP19.73■□□□□ 0.75
CCDC8-201ENST00000307522 PDCL2Q8N4E4 241 aa19.73■□□□□ 0.75
CCDC8-201ENST00000307522 TRERF1Q96PN7 1200 aa19.73■□□□□ 0.75
CCDC8-201ENST00000307522 NOLC1Q14978 699 aaKnown RBP eCLIP19.72■□□□□ 0.75
CCDC8-201ENST00000307522 PROSER2Q86WR7 435 aaPredicted RBP19.72■□□□□ 0.75
CCDC8-201ENST00000307522 CABLES1Q8TDN4 633 aa19.72■□□□□ 0.75
CCDC8-201ENST00000307522 CHMP4AQ9BY43 222 aa19.72■□□□□ 0.75
CCDC8-201ENST00000307522 C16orf71Q8IYS4 520 aaPredicted RBP19.72■□□□□ 0.75
CCDC8-201ENST00000307522 KIF3AQ9Y496 699 aa19.72■□□□□ 0.75
CCDC8-201ENST00000307522 F6X3S4 739 aa19.72■□□□□ 0.75
CCDC8-201ENST00000307522 NGEFQ8N5V2 710 aa19.71■□□□□ 0.75
CCDC8-201ENST00000307522 USP6P35125 1406 aa19.71■□□□□ 0.75
CCDC8-201ENST00000307522 ZBTB40Q9NUA8 1239 aa19.71■□□□□ 0.75
CCDC8-201ENST00000307522 FAM135BQ49AJ0 1406 aa19.7■□□□□ 0.74
CCDC8-201ENST00000307522 DLC1Q96QB1 1528 aa19.7■□□□□ 0.74
CCDC8-201ENST00000307522 NAA30Q147X3 362 aaPredicted RBP19.7■□□□□ 0.74
CCDC8-201ENST00000307522 SETD1AO15047 1707 aaKnown RBP19.7■□□□□ 0.74
CCDC8-201ENST00000307522 C3P01024 1663 aa19.69■□□□□ 0.74
CCDC8-201ENST00000307522 BMP2KLQ5H9B9 411 aa19.69■□□□□ 0.74
CCDC8-201ENST00000307522 SPC24Q8NBT2 197 aa19.69■□□□□ 0.74
CCDC8-201ENST00000307522 RTF1Q92541 710 aaKnown RBP19.69■□□□□ 0.74
CCDC8-201ENST00000307522 SMARCA5O60264 1052 aaPredicted RBP19.69■□□□□ 0.74
CCDC8-201ENST00000307522 IBTKQ9P2D0 1353 aaPredicted RBP19.69■□□□□ 0.74
CCDC8-201ENST00000307522 PDIA4P13667 645 aaKnown RBP19.68■□□□□ 0.74
CCDC8-201ENST00000307522 GNAI1P63096 354 aa19.68■□□□□ 0.74
CCDC8-201ENST00000307522 NUCB2P80303 420 aa19.68■□□□□ 0.74
CCDC8-201ENST00000307522 GADD45BO75293 160 aaPredicted RBP19.68■□□□□ 0.74
CCDC8-201ENST00000307522 OTUD7AQ8TE49 926 aaPredicted RBP19.68■□□□□ 0.74
CCDC8-201ENST00000307522 CDK11BP21127 795 aaKnown RBP19.67■□□□□ 0.74
CCDC8-201ENST00000307522 GTPBP4Q9BZE4 634 aaKnown RBP19.67■□□□□ 0.74
CCDC8-201ENST00000307522 TSPYL4Q9UJ04 414 aa19.67■□□□□ 0.74
CCDC8-201ENST00000307522 TSPY26PQ9H489 355 aa19.67■□□□□ 0.74
CCDC8-201ENST00000307522 GSPT1P15170 499 aaKnown RBP19.66■□□□□ 0.74
CCDC8-201ENST00000307522 DNAJC5Q9H3Z4 198 aa19.66■□□□□ 0.74
CCDC8-201ENST00000307522 RIOK3O14730 519 aaKnown RBP19.66■□□□□ 0.74
CCDC8-201ENST00000307522 ANXA1P04083 346 aa19.66■□□□□ 0.74
CCDC8-201ENST00000307522 G2E3Q7L622 706 aa19.66■□□□□ 0.74
CCDC8-201ENST00000307522 EIF2S2P20042 333 aaKnown RBP19.65■□□□□ 0.74
CCDC8-201ENST00000307522 CERS3Q8IU89 383 aa19.65■□□□□ 0.74
CCDC8-201ENST00000307522 ERICH4A6NGS2 130 aa19.65■□□□□ 0.74
CCDC8-201ENST00000307522 LETM1O95202 739 aaPredicted RBP19.65■□□□□ 0.74
CCDC8-201ENST00000307522 KIF20AO95235 890 aa19.65■□□□□ 0.74
CCDC8-201ENST00000307522 CFAP44Q96MT7 982 aa19.65■□□□□ 0.74
CCDC8-201ENST00000307522 SLC4A2P04920 1241 aa19.64■□□□□ 0.74
CCDC8-201ENST00000307522 KCNJ4P48050 445 aa19.64■□□□□ 0.74
CCDC8-201ENST00000307522 SIRT1Q96EB6 747 aa19.64■□□□□ 0.74
CCDC8-201ENST00000307522 RGPD8O14715 1765 aaPredicted RBP19.64■□□□□ 0.74
CCDC8-201ENST00000307522 ADCY5O95622 1261 aa19.64■□□□□ 0.73
CCDC8-201ENST00000307522 HCLS1P14317 486 aaPredicted RBP19.64■□□□□ 0.73
CCDC8-201ENST00000307522 HOXC9P31274 260 aa19.64■□□□□ 0.73
CCDC8-201ENST00000307522 FER1L4A9Z1Z3 1794 aa19.64■□□□□ 0.73
CCDC8-201ENST00000307522 MCM5P33992 734 aa19.64■□□□□ 0.73
CCDC8-201ENST00000307522 MRPL50Q8N5N7 158 aaKnown RBP19.64■□□□□ 0.73
CCDC8-201ENST00000307522 TECPR2O15040 1411 aa19.63■□□□□ 0.73
CCDC8-201ENST00000307522 CYP2E1P05181 493 aaPredicted RBP19.63■□□□□ 0.73
CCDC8-201ENST00000307522 CDC42BPGQ6DT37 1551 aa19.63■□□□□ 0.73
CCDC8-201ENST00000307522 CDC45O75419 566 aa19.63■□□□□ 0.73
CCDC8-201ENST00000307522 USP32Q8NFA0 1604 aa19.62■□□□□ 0.73
CCDC8-201ENST00000307522 RIMS1Q86UR5 1692 aaKnown RBP19.62■□□□□ 0.73
CCDC8-201ENST00000307522 IPO8O15397 1037 aaKnown RBP19.62■□□□□ 0.73
CCDC8-201ENST00000307522 CHRNA2Q15822 529 aa19.62■□□□□ 0.73
CCDC8-201ENST00000307522 NBPF6Q5VWK0 638 aa19.62■□□□□ 0.73
CCDC8-201ENST00000307522 CLEC17AQ6ZS10 378 aa19.62■□□□□ 0.73
CCDC8-201ENST00000307522 PIBF1Q8WXW3 757 aa19.62■□□□□ 0.73
CCDC8-201ENST00000307522 NBPF4Q96M43 638 aa19.62■□□□□ 0.73
CCDC8-201ENST00000307522 IFT57Q9NWB7 429 aa19.62■□□□□ 0.73
CCDC8-201ENST00000307522 PYCARDQ9ULZ3 195 aa19.62■□□□□ 0.73
CCDC8-201ENST00000307522 PAXIP1Q6ZW49 1069 aaPredicted RBP19.61■□□□□ 0.73
CCDC8-201ENST00000307522 MPRIPQ6WCQ1 1025 aa19.61■□□□□ 0.73
CCDC8-201ENST00000307522 ZBTB9Q96C00 473 aa19.61■□□□□ 0.73
CCDC8-201ENST00000307522 LGR6Q9HBX8 967 aa19.61■□□□□ 0.73
CCDC8-201ENST00000307522 KIF20BQ96Q89 1820 aa19.6■□□□□ 0.73
CCDC8-201ENST00000307522 RABEP1Q15276 862 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms