RNA–Protein interactions for RNA: ENST00000301480.4

ZNF560-201, Transcript of zinc finger protein 560, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF560, Length 2,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560-201ENST00000301480 PCDH10Q9P2E7 1040 aa5.87□□□□□ -1.47
ZNF560-201ENST00000301480 ZHX1Q9UKY1 873 aaPredicted RBP5.87□□□□□ -1.47
ZNF560-201ENST00000301480 CCDC61Q9Y6R9 512 aa5.87□□□□□ -1.47
ZNF560-201ENST00000301480 ALS2Q96Q42 1657 aa5.87□□□□□ -1.47
ZNF560-201ENST00000301480 RGL2O15211 777 aa5.87□□□□□ -1.47
ZNF560-201ENST00000301480 KRT27Q7Z3Y8 459 aa5.87□□□□□ -1.47
ZNF560-201ENST00000301480 IFNLR1Q8IU57 520 aaPredicted RBP5.87□□□□□ -1.47
ZNF560-201ENST00000301480 SDR16C5Q8N3Y7 309 aa5.87□□□□□ -1.47
ZNF560-201ENST00000301480 TSPAN18Q96SJ8 248 aa5.87□□□□□ -1.47
ZNF560-201ENST00000301480 SLC24A3Q9HC58 644 aa5.87□□□□□ -1.47
ZNF560-201ENST00000301480 THRAP3Q9Y2W1 955 aaKnown RBP5.87□□□□□ -1.47
ZNF560-201ENST00000301480 BAG6P46379 1132 aa5.86□□□□□ -1.47
ZNF560-201ENST00000301480 BARGINQ6ZT62 677 aa5.86□□□□□ -1.47
ZNF560-201ENST00000301480 SEPT12Q8IYM1 358 aa5.86□□□□□ -1.47
ZNF560-201ENST00000301480 DCBLD2Q96PD2 775 aa5.86□□□□□ -1.47
ZNF560-201ENST00000301480 PDCL3Q9H2J4 239 aa5.86□□□□□ -1.47
ZNF560-201ENST00000301480 ABCA3Q99758 1704 aa5.86□□□□□ -1.47
ZNF560-201ENST00000301480 GOLGA6CA6NDK9 693 aa5.86□□□□□ -1.47
ZNF560-201ENST00000301480 GOLGA6BA6NDN3 693 aa5.86□□□□□ -1.47
ZNF560-201ENST00000301480 GOLGA6DP0CG33 693 aa5.86□□□□□ -1.47
ZNF560-201ENST00000301480 SCP2P22307 547 aa5.86□□□□□ -1.47
ZNF560-201ENST00000301480 PPP4R3BQ5MIZ7 849 aa5.86□□□□□ -1.47
ZNF560-201ENST00000301480 NGDNQ8NEJ9 315 aaKnown RBP5.86□□□□□ -1.47
ZNF560-201ENST00000301480 DCAF11Q8TEB1 546 aa5.86□□□□□ -1.47
ZNF560-201ENST00000301480 CHMP4CQ96CF2 233 aa5.86□□□□□ -1.47
ZNF560-201ENST00000301480 GOLGA6AQ9NYA3 693 aa5.86□□□□□ -1.47
ZNF560-201ENST00000301480 SPATA31A5Q5VU36 1347 aa5.86□□□□□ -1.47
ZNF560-201ENST00000301480 SPATA31A7Q8IWB4 1347 aa5.86□□□□□ -1.47
ZNF560-201ENST00000301480 PLCH1Q4KWH8 1693 aa5.86□□□□□ -1.47
ZNF560-201ENST00000301480 NRAPQ86VF7 1730 aa5.86□□□□□ -1.47
ZNF560-201ENST00000301480 CT47B1P0C2W7 299 aaPredicted RBP5.85□□□□□ -1.47
ZNF560-201ENST00000301480 DNTTIP2Q5QJE6 756 aaKnown RBP5.85□□□□□ -1.47
ZNF560-201ENST00000301480 EP400NLQ6ZTU2 488 aa5.85□□□□□ -1.47
ZNF560-201ENST00000301480 RETREG2Q8NC44 543 aa5.85□□□□□ -1.47
ZNF560-201ENST00000301480 PNMA2Q9UL42 364 aa5.85□□□□□ -1.47
ZNF560-201ENST00000301480 LRP5O75197 1615 aa5.85□□□□□ -1.47
ZNF560-201ENST00000301480 KIF4AO95239 1232 aa5.85□□□□□ -1.47
ZNF560-201ENST00000301480 CCDC184Q52MB2 194 aa5.85□□□□□ -1.47
ZNF560-201ENST00000301480 KRBA2Q6ZNG9 492 aa5.85□□□□□ -1.47
ZNF560-201ENST00000301480 DDX46Q7L014 1031 aaKnown RBP5.85□□□□□ -1.47
ZNF560-201ENST00000301480 NUDT16Q96DE0 195 aaKnown RBP5.85□□□□□ -1.47
ZNF560-201ENST00000301480 TRAK1Q9UPV9 953 aa5.85□□□□□ -1.47
ZNF560-201ENST00000301480 ABCC6O95255 1503 aa5.85□□□□□ -1.47
ZNF560-201ENST00000301480 FAM83GA6ND36 823 aa5.84□□□□□ -1.47
ZNF560-201ENST00000301480 RAB11FIP3O75154 756 aa5.84□□□□□ -1.47
ZNF560-201ENST00000301480 MAP4K4O95819 1239 aaPredicted RBP5.84□□□□□ -1.47
ZNF560-201ENST00000301480 PAX3P23760 479 aa5.84□□□□□ -1.47
ZNF560-201ENST00000301480 MAP2K1Q02750 393 aaPredicted RBP5.84□□□□□ -1.47
ZNF560-201ENST00000301480 FAM196AQ6ZSG2 479 aa5.84□□□□□ -1.47
ZNF560-201ENST00000301480 RNF217Q8TC41 542 aa5.84□□□□□ -1.47
ZNF560-201ENST00000301480 CDCA7Q9BWT1 371 aaPredicted RBP5.84□□□□□ -1.47
ZNF560-201ENST00000301480 USP19O94966 1318 aa5.84□□□□□ -1.47
ZNF560-201ENST00000301480 ERBB3P21860 1342 aa5.84□□□□□ -1.47
ZNF560-201ENST00000301480 CCDC181Q5TID7 509 aa5.84□□□□□ -1.47
ZNF560-201ENST00000301480 NLRP13Q86W25 1043 aa5.84□□□□□ -1.47
ZNF560-201ENST00000301480 CREBRFQ8IUR6 639 aa5.84□□□□□ -1.47
ZNF560-201ENST00000301480 DDRGK1Q96HY6 314 aa5.84□□□□□ -1.47
ZNF560-201ENST00000301480 PRR36Q9H6K5 1346 aa5.84□□□□□ -1.47
ZNF560-201ENST00000301480 THSD7AQ9UPZ6 1657 aa5.84□□□□□ -1.47
ZNF560-201ENST00000301480 RGPD1P0DJD0 1748 aa5.84□□□□□ -1.47
ZNF560-201ENST00000301480 ARHGEF28Q8N1W1 1705 aaKnown RBP5.84□□□□□ -1.47
ZNF560-201ENST00000301480 ANKRD62A6NC57 917 aa5.83□□□□□ -1.48
ZNF560-201ENST00000301480 GOLIM4O00461 696 aa5.83□□□□□ -1.48
ZNF560-201ENST00000301480 BCL9O00512 1426 aa5.83□□□□□ -1.48
ZNF560-201ENST00000301480 EPB41L2O43491 1005 aaKnown RBP5.83□□□□□ -1.48
ZNF560-201ENST00000301480 CD44P16070 742 aaKnown RBP5.83□□□□□ -1.48
ZNF560-201ENST00000301480 XPCQ01831 940 aaPredicted RBP5.83□□□□□ -1.48
ZNF560-201ENST00000301480 ZNF280DQ6N043 979 aa5.83□□□□□ -1.48
ZNF560-201ENST00000301480 TOPAZ1Q8N9V7 1692 aa5.83□□□□□ -1.48
ZNF560-201ENST00000301480 BORCS6Q96GS4 357 aa5.83□□□□□ -1.48
ZNF560-201ENST00000301480 PRDM11Q9NQV5 511 aa5.83□□□□□ -1.48
ZNF560-201ENST00000301480 ZC3H4Q9UPT8 1303 aaKnown RBP5.83□□□□□ -1.48
ZNF560-201ENST00000301480 CRYBG1Q9Y4K1 1723 aa5.83□□□□□ -1.48
ZNF560-201ENST00000301480 SBNO2Q9Y2G9 1366 aa5.83□□□□□ -1.48
ZNF560-201ENST00000301480 SPATA31A1Q5TZJ5 1347 aa5.83□□□□□ -1.48
ZNF560-201ENST00000301480 NBPF8Q3BBV2 869 aa5.83□□□□□ -1.48
ZNF560-201ENST00000301480 CDK19Q9BWU1 502 aa5.83□□□□□ -1.48
ZNF560-201ENST00000301480 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.83□□□□□ -1.48
ZNF560-201ENST00000301480 BTG4Q9NY30 223 aa5.83□□□□□ -1.48
ZNF560-201ENST00000301480 MINK1Q8N4C8 1332 aaPredicted RBP5.82□□□□□ -1.48
ZNF560-201ENST00000301480 NUTM2FA1L443 756 aa5.82□□□□□ -1.48
ZNF560-201ENST00000301480 HMGB2P26583 209 aaKnown RBP5.82□□□□□ -1.48
ZNF560-201ENST00000301480 PMFBP1Q8TBY8 1022 aa5.82□□□□□ -1.48
ZNF560-201ENST00000301480 IGSF5Q9NSI5 407 aa5.82□□□□□ -1.48
ZNF560-201ENST00000301480 AATKQ6ZMQ8 1374 aa5.82□□□□□ -1.48
ZNF560-201ENST00000301480 TTC21AQ8NDW8 1320 aa5.82□□□□□ -1.48
ZNF560-201ENST00000301480 POTEIP0CG38 1075 aa5.82□□□□□ -1.48
ZNF560-201ENST00000301480 MAMSTRQ6ZN01 415 aa5.82□□□□□ -1.48
ZNF560-201ENST00000301480 KAT6BQ8WYB5 2073 aa5.82□□□□□ -1.48
ZNF560-201ENST00000301480 EVC2Q86UK5 1308 aa5.82□□□□□ -1.48
ZNF560-201ENST00000301480 LONRF3Q496Y0 759 aa5.81□□□□□ -1.48
ZNF560-201ENST00000301480 SMAP1Q8IYB5 467 aaPredicted RBP5.81□□□□□ -1.48
ZNF560-201ENST00000301480 KCNH5Q8NCM2 988 aa5.81□□□□□ -1.48
ZNF560-201ENST00000301480 GEMIN8Q9NWZ8 242 aaKnown RBP5.81□□□□□ -1.48
ZNF560-201ENST00000301480 RGPD8O14715 1765 aaPredicted RBP5.81□□□□□ -1.48
ZNF560-201ENST00000301480 ACEP12821 1306 aa5.81□□□□□ -1.48
ZNF560-201ENST00000301480 MTA1Q13330 715 aa5.81□□□□□ -1.48
ZNF560-201ENST00000301480 ZFYVE27Q5T4F4 411 aa5.81□□□□□ -1.48
ZNF560-201ENST00000301480 NBPF6Q5VWK0 638 aa5.81□□□□□ -1.48
ZNF560-201ENST00000301480 NBPF10Q6P3W6 841 aaKnown RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms