RNA–Protein interactions for RNA: ENST00000299752.8

CDH16-201, Transcript of cadherin 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH16, Length 2,954 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-201ENST00000299752 G2E3Q7L622 706 aa17.97■□□□□ 0.47
CDH16-201ENST00000299752 RWDD1Q9H446 243 aaPredicted RBP17.97■□□□□ 0.47
CDH16-201ENST00000299752 ZBTB40Q9NUA8 1239 aa17.96■□□□□ 0.47
CDH16-201ENST00000299752 LRRC37A3O60309 1634 aa17.96■□□□□ 0.47
CDH16-201ENST00000299752 PRAMEF22A3QJZ6 481 aa17.96■□□□□ 0.47
CDH16-201ENST00000299752 NFATC2IPQ8NCF5 419 aa17.96■□□□□ 0.47
CDH16-201ENST00000299752 AHDC1Q5TGY3 1603 aaPredicted RBP17.96■□□□□ 0.47
CDH16-201ENST00000299752 VIRMAQ69YN4 1812 aaKnown RBP17.95■□□□□ 0.46
CDH16-201ENST00000299752 ANXA1P04083 346 aa17.94■□□□□ 0.46
CDH16-201ENST00000299752 API5Q9BZZ5 524 aaKnown RBP17.94■□□□□ 0.46
CDH16-201ENST00000299752 IFNL2Q8IZJ0 200 aa17.94■□□□□ 0.46
CDH16-201ENST00000299752 ABCC4O15439 1325 aa17.94■□□□□ 0.46
CDH16-201ENST00000299752 BACH2Q9BYV9 841 aa17.94■□□□□ 0.46
CDH16-201ENST00000299752 F6X3S4 739 aa17.93■□□□□ 0.46
CDH16-201ENST00000299752 CARD10Q9BWT7 1032 aa17.93■□□□□ 0.46
CDH16-201ENST00000299752 C1orf115Q9H7X2 142 aa17.93■□□□□ 0.46
CDH16-201ENST00000299752 KDM6AO15550 1401 aaPredicted RBP17.93■□□□□ 0.46
CDH16-201ENST00000299752 IL2RBP14784 551 aa17.93■□□□□ 0.46
CDH16-201ENST00000299752 ZCRB1Q8TBF4 217 aaKnown RBP17.93■□□□□ 0.46
CDH16-201ENST00000299752 ZBTB7BO15156 539 aaPredicted RBP17.92■□□□□ 0.46
CDH16-201ENST00000299752 EIF4A1P60842 406 aaKnown RBP17.92■□□□□ 0.46
CDH16-201ENST00000299752 COL16A1Q07092 1604 aaPredicted RBP17.92■□□□□ 0.46
CDH16-201ENST00000299752 KAT6BQ8WYB5 2073 aa17.92■□□□□ 0.46
CDH16-201ENST00000299752 HDGFL1Q5TGJ6 251 aa17.91■□□□□ 0.46
CDH16-201ENST00000299752 SLC4A10Q6U841 1118 aa17.91■□□□□ 0.46
CDH16-201ENST00000299752 CCDC9Q9Y3X0 531 aaKnown RBP17.91■□□□□ 0.46
CDH16-201ENST00000299752 STK31Q9BXU1 1019 aa17.9■□□□□ 0.46
CDH16-201ENST00000299752 BABAM1Q9NWV8 329 aa17.9■□□□□ 0.46
CDH16-201ENST00000299752 HDAC1Q13547 482 aaPredicted RBP17.89■□□□□ 0.45
CDH16-201ENST00000299752 SLC52A2Q9HAB3 445 aa17.89■□□□□ 0.45
CDH16-201ENST00000299752 PDZRN3Q9UPQ7 1066 aa17.89■□□□□ 0.45
CDH16-201ENST00000299752 OVOS2A0A0G2JMS6 1433 aa17.89■□□□□ 0.45
CDH16-201ENST00000299752 ABCC6O95255 1503 aa17.89■□□□□ 0.45
CDH16-201ENST00000299752 PHAXQ9H814 394 aaKnown RBP17.89■□□□□ 0.45
CDH16-201ENST00000299752 CERKQ8TCT0 537 aa17.88■□□□□ 0.45
CDH16-201ENST00000299752 PTPRCP08575 1304 aa17.88■□□□□ 0.45
CDH16-201ENST00000299752 CABP4P57796 275 aa17.88■□□□□ 0.45
CDH16-201ENST00000299752 CCDC30Q5VVM6 783 aa17.88■□□□□ 0.45
CDH16-201ENST00000299752 C8orf37Q96NL8 207 aa17.88■□□□□ 0.45
CDH16-201ENST00000299752 CHMP4BQ9H444 224 aaKnown RBP17.88■□□□□ 0.45
CDH16-201ENST00000299752 CHPF2Q9P2E5 772 aa17.88■□□□□ 0.45
CDH16-201ENST00000299752 RGS12O14924 1447 aa17.87■□□□□ 0.45
CDH16-201ENST00000299752 PIP4K2AP48426 406 aaPredicted RBP17.87■□□□□ 0.45
CDH16-201ENST00000299752 FKBP5Q13451 457 aaPredicted RBP17.87■□□□□ 0.45
CDH16-201ENST00000299752 BCL11AQ9H165 835 aa17.87■□□□□ 0.45
CDH16-201ENST00000299752 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.87■□□□□ 0.45
CDH16-201ENST00000299752 A0A0G2JS52 829 aa17.87■□□□□ 0.45
CDH16-201ENST00000299752 DCAF5Q96JK2 942 aa17.87■□□□□ 0.45
CDH16-201ENST00000299752 PCDH11XQ9BZA7 1347 aa17.86■□□□□ 0.45
CDH16-201ENST00000299752 PCDH11YQ9BZA8 1340 aa17.86■□□□□ 0.45
CDH16-201ENST00000299752 INTS3Q68E01 1043 aaKnown RBP17.85■□□□□ 0.45
CDH16-201ENST00000299752 ZNF790Q6PG37 636 aa17.85■□□□□ 0.45
CDH16-201ENST00000299752 FLIIQ13045 1269 aa17.85■□□□□ 0.45
CDH16-201ENST00000299752 PROSER3Q2NL68 480 aa17.85■□□□□ 0.45
CDH16-201ENST00000299752 FAM161AQ3B820 660 aa17.85■□□□□ 0.45
CDH16-201ENST00000299752 KDM3BQ7LBC6 1761 aa17.84■□□□□ 0.45
CDH16-201ENST00000299752 SCN11AQ9UI33 1791 aa17.84■□□□□ 0.45
CDH16-201ENST00000299752 ZNF496Q96IT1 587 aaPredicted RBP17.84■□□□□ 0.45
CDH16-201ENST00000299752 COL22A1Q8NFW1 1626 aaPredicted RBP17.84■□□□□ 0.45
CDH16-201ENST00000299752 NPM2Q86SE8 214 aaKnown RBP17.84■□□□□ 0.45
CDH16-201ENST00000299752 COL14A1Q05707 1796 aaKnown RBP17.84■□□□□ 0.45
CDH16-201ENST00000299752 PKD1L3Q7Z443 1732 aa17.83■□□□□ 0.45
CDH16-201ENST00000299752 GIGYF1O75420 1035 aaPredicted RBP17.83■□□□□ 0.45
CDH16-201ENST00000299752 C8orf34Q49A92 452 aa17.83■□□□□ 0.45
CDH16-201ENST00000299752 PTCD1O75127 700 aaKnown RBP17.82■□□□□ 0.44
CDH16-201ENST00000299752 SMC5Q8IY18 1101 aa17.82■□□□□ 0.44
CDH16-201ENST00000299752 TTC5Q8N0Z6 440 aa17.82■□□□□ 0.44
CDH16-201ENST00000299752 NGLY1Q96IV0 654 aa17.82■□□□□ 0.44
CDH16-201ENST00000299752 PARP4Q9UKK3 1724 aaKnown RBP17.82■□□□□ 0.44
CDH16-201ENST00000299752 SOS1Q07889 1333 aaPredicted RBP17.82■□□□□ 0.44
CDH16-201ENST00000299752 MSH5O43196 834 aa17.81■□□□□ 0.44
CDH16-201ENST00000299752 HSPA1LP34931 641 aa17.81■□□□□ 0.44
CDH16-201ENST00000299752 ANP32AP39687 249 aaKnown RBP17.81■□□□□ 0.44
CDH16-201ENST00000299752 SYTL4Q96C24 671 aaPredicted RBP17.81■□□□□ 0.44
CDH16-201ENST00000299752 HSP90AB1P08238 724 aaKnown RBP17.81■□□□□ 0.44
CDH16-201ENST00000299752 MYL6BP14649 208 aa17.81■□□□□ 0.44
CDH16-201ENST00000299752 AIMP1Q12904 312 aaKnown RBP17.81■□□□□ 0.44
CDH16-201ENST00000299752 SIRT2Q8IXJ6 389 aa17.81■□□□□ 0.44
CDH16-201ENST00000299752 SIPA1L3O60292 1781 aaPredicted RBP17.81■□□□□ 0.44
CDH16-201ENST00000299752 MEIS3Q99687 375 aa17.8■□□□□ 0.44
CDH16-201ENST00000299752 PLCH1Q4KWH8 1693 aa17.8■□□□□ 0.44
CDH16-201ENST00000299752 USP16Q9Y5T5 823 aa17.79■□□□□ 0.44
CDH16-201ENST00000299752 MYT1Q01538 1121 aa17.78■□□□□ 0.44
CDH16-201ENST00000299752 SHANK3Q9BYB0 1731 aa17.78■□□□□ 0.44
CDH16-201ENST00000299752 EXOC5O00471 708 aa17.78■□□□□ 0.44
CDH16-201ENST00000299752 CACNA1FO60840 1977 aa17.78■□□□□ 0.44
CDH16-201ENST00000299752 ADAMTS7Q9UKP4 1686 aa17.78■□□□□ 0.44
CDH16-201ENST00000299752 CCT4P50991 539 aaKnown RBP17.76■□□□□ 0.43
CDH16-201ENST00000299752 SPATA31A1Q5TZJ5 1347 aa17.76■□□□□ 0.43
CDH16-201ENST00000299752 PI4KAP2A4QPH2 592 aa17.76■□□□□ 0.43
CDH16-201ENST00000299752 NUCB1Q02818 461 aa17.76■□□□□ 0.43
CDH16-201ENST00000299752 FAM98CQ17RN3 349 aaKnown RBP17.76■□□□□ 0.43
CDH16-201ENST00000299752 PI4KAP1Q8N8J0 262 aa17.76■□□□□ 0.43
CDH16-201ENST00000299752 LNPKQ9C0E8 428 aa17.76■□□□□ 0.43
CDH16-201ENST00000299752 JCADQ9P266 1359 aa17.76■□□□□ 0.43
CDH16-201ENST00000299752 HOXB7P09629 217 aa17.76■□□□□ 0.43
CDH16-201ENST00000299752 ACSBG1Q96GR2 724 aa17.76■□□□□ 0.43
CDH16-201ENST00000299752 TMOD3Q9NYL9 352 aa17.75■□□□□ 0.43
CDH16-201ENST00000299752 ASAP1Q9ULH1 1129 aa17.75■□□□□ 0.43
CDH16-201ENST00000299752 GCC1Q96CN9 775 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms