RNA–Protein interactions for RNA: ENST00000294256.12

SYVN1-201, Transcript of synoviolin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYVN1, Length 3,048 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-201ENST00000294256 MPRIPQ6WCQ1 1025 aa21.63■■□□□ 1.05
SYVN1-201ENST00000294256 PDE1AP54750 535 aa21.62■■□□□ 1.05
SYVN1-201ENST00000294256 TOPAZ1Q8N9V7 1692 aa21.61■■□□□ 1.05
SYVN1-201ENST00000294256 XRCC6P12956 609 aaKnown RBP eCLIP21.61■■□□□ 1.05
SYVN1-201ENST00000294256 KIF24Q5T7B8 1368 aa21.61■■□□□ 1.05
SYVN1-201ENST00000294256 NUTM1Q86Y26 1132 aa21.61■■□□□ 1.05
SYVN1-201ENST00000294256 KDRP35968 1356 aa21.6■■□□□ 1.05
SYVN1-201ENST00000294256 NCLP19338 710 aaKnown RBP21.6■■□□□ 1.05
SYVN1-201ENST00000294256 DDX11L8A8MPP1 907 aa21.6■■□□□ 1.05
SYVN1-201ENST00000294256 ORAI2Q96SN7 254 aa21.6■■□□□ 1.05
SYVN1-201ENST00000294256 LRRCC1Q9C099 1032 aa21.6■■□□□ 1.05
SYVN1-201ENST00000294256 MAP3K5Q99683 1374 aa21.59■■□□□ 1.05
SYVN1-201ENST00000294256 PKP1Q13835 747 aa21.59■■□□□ 1.05
SYVN1-201ENST00000294256 GBP4Q96PP9 640 aa21.59■■□□□ 1.05
SYVN1-201ENST00000294256 UBTFL1P0CB47 393 aaPredicted RBP21.59■■□□□ 1.05
SYVN1-201ENST00000294256 L1TD1Q5T7N2 865 aaKnown RBP21.59■■□□□ 1.05
SYVN1-201ENST00000294256 CHAMP1Q96JM3 812 aa21.59■■□□□ 1.05
SYVN1-201ENST00000294256 AK9Q5TCS8 1911 aa21.59■■□□□ 1.05
SYVN1-201ENST00000294256 DDIT3P35638 169 aa21.58■■□□□ 1.04
SYVN1-201ENST00000294256 RAB3GAP1Q15042 981 aa21.58■■□□□ 1.04
SYVN1-201ENST00000294256 ZGPATQ8N5A5 531 aaKnown RBP21.58■■□□□ 1.04
SYVN1-201ENST00000294256 CHPF2Q9P2E5 772 aa21.58■■□□□ 1.04
SYVN1-201ENST00000294256 PIK3C2AO00443 1686 aa21.57■■□□□ 1.04
SYVN1-201ENST00000294256 GNAI3P08754 354 aa21.57■■□□□ 1.04
SYVN1-201ENST00000294256 ANKLE2Q86XL3 938 aa21.57■■□□□ 1.04
SYVN1-201ENST00000294256 TEFQ10587 303 aa21.57■■□□□ 1.04
SYVN1-201ENST00000294256 RABEP1Q15276 862 aa21.57■■□□□ 1.04
SYVN1-201ENST00000294256 ZNF530Q6P9A1 599 aaPredicted RBP21.57■■□□□ 1.04
SYVN1-201ENST00000294256 ANO8Q9HCE9 1232 aaPredicted RBP21.57■■□□□ 1.04
SYVN1-201ENST00000294256 ANO2Q9NQ90 1003 aa21.57■■□□□ 1.04
SYVN1-201ENST00000294256 SURF6O75683 361 aaKnown RBP21.56■■□□□ 1.04
SYVN1-201ENST00000294256 USP44Q9H0E7 712 aa21.56■■□□□ 1.04
SYVN1-201ENST00000294256 ERC2O15083 957 aa21.55■■□□□ 1.04
SYVN1-201ENST00000294256 MX1P20591 662 aa21.55■■□□□ 1.04
SYVN1-201ENST00000294256 UNC5CLQ8IV45 518 aa21.55■■□□□ 1.04
SYVN1-201ENST00000294256 FOXD4L6Q3SYB3 417 aaPredicted RBP21.55■■□□□ 1.04
SYVN1-201ENST00000294256 MCTP1Q6DN14 999 aa21.55■■□□□ 1.04
SYVN1-201ENST00000294256 FOXD4L3Q6VB84 417 aaPredicted RBP21.55■■□□□ 1.04
SYVN1-201ENST00000294256 RGPD1P0DJD0 1748 aa21.55■■□□□ 1.04
SYVN1-201ENST00000294256 REC8O95072 547 aa21.54■■□□□ 1.04
SYVN1-201ENST00000294256 NEK4P51957 841 aa21.54■■□□□ 1.04
SYVN1-201ENST00000294256 TPRNQ4KMQ1 711 aa21.54■■□□□ 1.04
SYVN1-201ENST00000294256 NALCNQ8IZF0 1738 aa21.54■■□□□ 1.04
SYVN1-201ENST00000294256 PI4KAP2A4QPH2 592 aa21.54■■□□□ 1.04
SYVN1-201ENST00000294256 ATP8B2P98198 1209 aa21.54■■□□□ 1.04
SYVN1-201ENST00000294256 PI4KAP1Q8N8J0 262 aa21.54■■□□□ 1.04
SYVN1-201ENST00000294256 NBPF7P0C2Y1 421 aaPredicted RBP21.53■■□□□ 1.04
SYVN1-201ENST00000294256 NCOA3Q9Y6Q9 1424 aa21.53■■□□□ 1.04
SYVN1-201ENST00000294256 BTBD11A6QL63 1104 aa21.53■■□□□ 1.04
SYVN1-201ENST00000294256 PPP1R42Q7Z4L9 355 aa21.53■■□□□ 1.04
SYVN1-201ENST00000294256 ARHGAP23Q9P227 1491 aa21.53■■□□□ 1.04
SYVN1-201ENST00000294256 PRAMEF22A3QJZ6 481 aa21.53■■□□□ 1.04
SYVN1-201ENST00000294256 SLIT1O75093 1534 aa21.52■■□□□ 1.04
SYVN1-201ENST00000294256 FMN2Q9NZ56 1722 aa21.52■■□□□ 1.04
SYVN1-201ENST00000294256 SRGAP3O43295 1099 aa21.52■■□□□ 1.04
SYVN1-201ENST00000294256 ST18O60284 1047 aa21.52■■□□□ 1.04
SYVN1-201ENST00000294256 IP6K1Q92551 441 aa21.52■■□□□ 1.04
SYVN1-201ENST00000294256 SRCIN1Q9C0H9 1055 aa21.52■■□□□ 1.04
SYVN1-201ENST00000294256 HTATSF1O43719 755 aaKnown RBP21.51■■□□□ 1.03
SYVN1-201ENST00000294256 ZC3H6P61129 1189 aaKnown RBP21.51■■□□□ 1.03
SYVN1-201ENST00000294256 OS9Q13438 667 aaPredicted RBP21.51■■□□□ 1.03
SYVN1-201ENST00000294256 CIZ1Q9ULV3 898 aaPredicted RBP21.51■■□□□ 1.03
SYVN1-201ENST00000294256 AIMP1Q12904 312 aaKnown RBP21.51■■□□□ 1.03
SYVN1-201ENST00000294256 DDX49Q9Y6V7 483 aaKnown RBP21.51■■□□□ 1.03
SYVN1-201ENST00000294256 FER1L4A9Z1Z3 1794 aa21.51■■□□□ 1.03
SYVN1-201ENST00000294256 UPF3BQ9BZI7 483 aaKnown RBP21.5■■□□□ 1.03
SYVN1-201ENST00000294256 PALD1Q9ULE6 856 aa21.5■■□□□ 1.03
SYVN1-201ENST00000294256 GAS2L3Q86XJ1 694 aa21.5■■□□□ 1.03
SYVN1-201ENST00000294256 DTNBO60941 627 aa21.49■■□□□ 1.03
SYVN1-201ENST00000294256 BAG4O95429 457 aaKnown RBP21.49■■□□□ 1.03
SYVN1-201ENST00000294256 EIF4A1P60842 406 aaKnown RBP21.49■■□□□ 1.03
SYVN1-201ENST00000294256 DDX17Q92841 729 aaKnown RBP21.49■■□□□ 1.03
SYVN1-201ENST00000294256 GOLGA6L22H0YM25 854 aa21.48■■□□□ 1.03
SYVN1-201ENST00000294256 LARP6Q9BRS8 491 aaKnown RBP21.48■■□□□ 1.03
SYVN1-201ENST00000294256 GCP02774 474 aa21.47■■□□□ 1.03
SYVN1-201ENST00000294256 C1orf141Q5JVX7 400 aa21.47■■□□□ 1.03
SYVN1-201ENST00000294256 GRPEL1Q9HAV7 217 aa21.47■■□□□ 1.03
SYVN1-201ENST00000294256 ESYT1Q9BSJ8 1104 aa21.47■■□□□ 1.03
SYVN1-201ENST00000294256 IL25Q9H293 177 aa21.47■■□□□ 1.03
SYVN1-201ENST00000294256 PROSER3Q2NL68 480 aa21.46■■□□□ 1.03
SYVN1-201ENST00000294256 FSD2A1L4K1 749 aa21.46■■□□□ 1.03
SYVN1-201ENST00000294256 EIF5BO60841 1220 aaKnown RBP21.46■■□□□ 1.03
SYVN1-201ENST00000294256 RRAGDQ9NQL2 400 aaPredicted RBP21.46■■□□□ 1.03
SYVN1-201ENST00000294256 DNAAF4Q8WXU2 420 aa21.45■■□□□ 1.02
SYVN1-201ENST00000294256 ANKRD24Q8TF21 1146 aa21.45■■□□□ 1.02
SYVN1-201ENST00000294256 AXIN2Q9Y2T1 843 aa21.45■■□□□ 1.02
SYVN1-201ENST00000294256 CHMLP26374 656 aa21.45■■□□□ 1.02
SYVN1-201ENST00000294256 CWF19L2Q2TBE0 894 aaKnown RBP21.45■■□□□ 1.02
SYVN1-201ENST00000294256 SOS1Q07889 1333 aaPredicted RBP21.44■■□□□ 1.02
SYVN1-201ENST00000294256 IBTKQ9P2D0 1353 aaPredicted RBP21.44■■□□□ 1.02
SYVN1-201ENST00000294256 SLC39A6Q13433 755 aa21.44■■□□□ 1.02
SYVN1-201ENST00000294256 PLEKHO1Q53GL0 409 aaPredicted RBP21.44■■□□□ 1.02
SYVN1-201ENST00000294256 C9orf78Q9NZ63 289 aaPredicted RBP21.44■■□□□ 1.02
SYVN1-201ENST00000294256 PA2G4Q9UQ80 394 aaKnown RBP21.44■■□□□ 1.02
SYVN1-201ENST00000294256 ANKARQ7Z5J8 1434 aa21.44■■□□□ 1.02
SYVN1-201ENST00000294256 PIP4K2AP48426 406 aaPredicted RBP21.43■■□□□ 1.02
SYVN1-201ENST00000294256 PRPF40AO75400 957 aaKnown RBP21.43■■□□□ 1.02
SYVN1-201ENST00000294256 OSBPL3Q9H4L5 887 aa21.43■■□□□ 1.02
SYVN1-201ENST00000294256 NWD1Q149M9 1564 aa21.42■■□□□ 1.02
SYVN1-201ENST00000294256 CAVIN1Q6NZI2 390 aaKnown RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms