RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 AXIN2Q9Y2T1 843 aa14.52□□□□□ -0.08
SYNGAP1-201ENST00000293748 STK31Q9BXU1 1019 aa14.52□□□□□ -0.09
SYNGAP1-201ENST00000293748 TRPM3Q9HCF6 1732 aaPredicted RBP14.52□□□□□ -0.09
SYNGAP1-201ENST00000293748 TEFQ10587 303 aa14.51□□□□□ -0.09
SYNGAP1-201ENST00000293748 SLC4A3P48751 1232 aa14.51□□□□□ -0.09
SYNGAP1-201ENST00000293748 GPATCH3Q96I76 525 aa14.51□□□□□ -0.09
SYNGAP1-201ENST00000293748 FOXD4L1Q9NU39 408 aa14.51□□□□□ -0.09
SYNGAP1-201ENST00000293748 ALS2Q96Q42 1657 aa14.51□□□□□ -0.09
SYNGAP1-201ENST00000293748 COL5A2P05997 1499 aaPredicted RBP14.51□□□□□ -0.09
SYNGAP1-201ENST00000293748 EYA1Q99502 592 aa14.51□□□□□ -0.09
SYNGAP1-201ENST00000293748 KIF3AQ9Y496 699 aa14.51□□□□□ -0.09
SYNGAP1-201ENST00000293748 ATP6V1DQ9Y5K8 247 aa14.51□□□□□ -0.09
SYNGAP1-201ENST00000293748 TRIM6-TRIM34B2RNG4 842 aa14.5□□□□□ -0.09
SYNGAP1-201ENST00000293748 ABCC6O95255 1503 aa14.5□□□□□ -0.09
SYNGAP1-201ENST00000293748 NBPF6Q5VWK0 638 aa14.5□□□□□ -0.09
SYNGAP1-201ENST00000293748 NBPF4Q96M43 638 aa14.5□□□□□ -0.09
SYNGAP1-201ENST00000293748 CHMP5Q9NZZ3 219 aa14.49□□□□□ -0.09
SYNGAP1-201ENST00000293748 FCHSD2O94868 740 aa14.49□□□□□ -0.09
SYNGAP1-201ENST00000293748 NRKQ7Z2Y5 1582 aa14.49□□□□□ -0.09
SYNGAP1-201ENST00000293748 KIF16BQ96L93 1317 aa14.49□□□□□ -0.09
SYNGAP1-201ENST00000293748 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.49□□□□□ -0.09
SYNGAP1-201ENST00000293748 BCL9LQ86UU0 1499 aa14.49□□□□□ -0.09
SYNGAP1-201ENST00000293748 CDK12Q9NYV4 1490 aaPredicted RBP14.49□□□□□ -0.09
SYNGAP1-201ENST00000293748 PIK3C2AO00443 1686 aa14.48□□□□□ -0.09
SYNGAP1-201ENST00000293748 NBPF14Q5TI25 921 aa14.48□□□□□ -0.09
SYNGAP1-201ENST00000293748 OVOS2A0A0G2JMS6 1433 aa14.48□□□□□ -0.09
SYNGAP1-201ENST00000293748 E9PSI1 815 aa14.48□□□□□ -0.09
SYNGAP1-201ENST00000293748 CABP4P57796 275 aa14.48□□□□□ -0.09
SYNGAP1-201ENST00000293748 CCDC146Q8IYE0 955 aa14.48□□□□□ -0.09
SYNGAP1-201ENST00000293748 TTC5Q8N0Z6 440 aa14.48□□□□□ -0.09
SYNGAP1-201ENST00000293748 NGEFQ8N5V2 710 aa14.48□□□□□ -0.09
SYNGAP1-201ENST00000293748 TMOD3Q9NYL9 352 aa14.48□□□□□ -0.09
SYNGAP1-201ENST00000293748 SMARCC1Q92922 1105 aaPredicted RBP14.47□□□□□ -0.09
SYNGAP1-201ENST00000293748 CRBNQ96SW2 442 aa14.47□□□□□ -0.09
SYNGAP1-201ENST00000293748 PRKAR2BP31323 418 aa14.47□□□□□ -0.09
SYNGAP1-201ENST00000293748 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.47□□□□□ -0.09
SYNGAP1-201ENST00000293748 NOC3LQ8WTT2 800 aaKnown RBP14.47□□□□□ -0.09
SYNGAP1-201ENST00000293748 KIF20BQ96Q89 1820 aa14.46□□□□□ -0.09
SYNGAP1-201ENST00000293748 APBA3O96018 575 aa14.46□□□□□ -0.09
SYNGAP1-201ENST00000293748 ANO8Q9HCE9 1232 aaPredicted RBP14.45□□□□□ -0.1
SYNGAP1-201ENST00000293748 PHRF1Q9P1Y6 1649 aaKnown RBP14.45□□□□□ -0.1
SYNGAP1-201ENST00000293748 CAMTA1Q9Y6Y1 1673 aa14.45□□□□□ -0.1
SYNGAP1-201ENST00000293748 PARD3Q8TEW0 1356 aa14.45□□□□□ -0.1
SYNGAP1-201ENST00000293748 TPM3P06753 285 aa14.45□□□□□ -0.1
SYNGAP1-201ENST00000293748 IL13P35225 146 aa14.44□□□□□ -0.1
SYNGAP1-201ENST00000293748 ZKSCAN2Q63HK3 967 aa14.44□□□□□ -0.1
SYNGAP1-201ENST00000293748 RGS17Q9UGC6 210 aaPredicted RBP14.44□□□□□ -0.1
SYNGAP1-201ENST00000293748 FAM43AQ8N2R8 423 aa14.44□□□□□ -0.1
SYNGAP1-201ENST00000293748 IGSF1Q8N6C5 1336 aa14.44□□□□□ -0.1
SYNGAP1-201ENST00000293748 NFAT5O94916 1531 aa14.44□□□□□ -0.1
SYNGAP1-201ENST00000293748 PLIN1O60240 522 aa14.44□□□□□ -0.1
SYNGAP1-201ENST00000293748 HSP90B1P14625 803 aaKnown RBP14.44□□□□□ -0.1
SYNGAP1-201ENST00000293748 ACSBG1Q96GR2 724 aa14.44□□□□□ -0.1
SYNGAP1-201ENST00000293748 NOL8Q76FK4 1167 aaKnown RBP14.43□□□□□ -0.1
SYNGAP1-201ENST00000293748 CHMP4CQ96CF2 233 aa14.43□□□□□ -0.1
SYNGAP1-201ENST00000293748 NPHP1O15259 732 aa14.43□□□□□ -0.1
SYNGAP1-201ENST00000293748 GOLGA6L19H0YKK7 550 aa14.43□□□□□ -0.1
SYNGAP1-201ENST00000293748 DCAF5Q96JK2 942 aa14.42□□□□□ -0.1
SYNGAP1-201ENST00000293748 TRIM37O94972 964 aa14.42□□□□□ -0.1
SYNGAP1-201ENST00000293748 RUNDC1Q96C34 613 aa14.42□□□□□ -0.1
SYNGAP1-201ENST00000293748 MYOM1P52179 1685 aa14.42□□□□□ -0.1
SYNGAP1-201ENST00000293748 GNAT3A8MTJ3 354 aa14.42□□□□□ -0.1
SYNGAP1-201ENST00000293748 GPS2Q13227 327 aa14.42□□□□□ -0.1
SYNGAP1-201ENST00000293748 AKAP4Q5JQC9 854 aa14.42□□□□□ -0.1
SYNGAP1-201ENST00000293748 BCL11BQ9C0K0 894 aaPredicted RBP14.42□□□□□ -0.1
SYNGAP1-201ENST00000293748 NWD2Q9ULI1 1742 aa14.42□□□□□ -0.1
SYNGAP1-201ENST00000293748 SF3A1Q15459 793 aaKnown RBP14.41□□□□□ -0.1
SYNGAP1-201ENST00000293748 MPRIPQ6WCQ1 1025 aa14.41□□□□□ -0.1
SYNGAP1-201ENST00000293748 NFKBIBQ15653 356 aa14.41□□□□□ -0.1
SYNGAP1-201ENST00000293748 ONECUT3O60422 494 aaPredicted RBP14.41□□□□□ -0.1
SYNGAP1-201ENST00000293748 MAP7D2Q96T17 732 aa14.41□□□□□ -0.1
SYNGAP1-201ENST00000293748 BECN2A8MW95 431 aa14.41□□□□□ -0.1
SYNGAP1-201ENST00000293748 PNISRQ8TF01 805 aaKnown RBP14.41□□□□□ -0.1
SYNGAP1-201ENST00000293748 FAM13BQ9NYF5 915 aa14.41□□□□□ -0.1
SYNGAP1-201ENST00000293748 SOCS7O14512 581 aa14.4□□□□□ -0.1
SYNGAP1-201ENST00000293748 REC8O95072 547 aa14.4□□□□□ -0.1
SYNGAP1-201ENST00000293748 ANKRD45Q5TZF3 282 aa14.4□□□□□ -0.1
SYNGAP1-201ENST00000293748 ZNF771Q7L3S4 317 aaPredicted RBP14.4□□□□□ -0.1
SYNGAP1-201ENST00000293748 MTERF4Q7Z6M4 381 aaKnown RBP14.4□□□□□ -0.1
SYNGAP1-201ENST00000293748 FOXD4L5Q5VV16 416 aaPredicted RBP14.4□□□□□ -0.1
SYNGAP1-201ENST00000293748 FOXD4L4Q8WXT5 416 aaPredicted RBP14.4□□□□□ -0.1
SYNGAP1-201ENST00000293748 SLC4A10Q6U841 1118 aa14.39□□□□□ -0.11
SYNGAP1-201ENST00000293748 COG6Q9Y2V7 657 aa14.39□□□□□ -0.11
SYNGAP1-201ENST00000293748 MRE11P49959 708 aa14.39□□□□□ -0.11
SYNGAP1-201ENST00000293748 RBM42Q9BTD8 480 aaKnown RBP14.39□□□□□ -0.11
SYNGAP1-201ENST00000293748 AEBP1Q8IUX7 1158 aa14.39□□□□□ -0.11
SYNGAP1-201ENST00000293748 MSH5O43196 834 aa14.39□□□□□ -0.11
SYNGAP1-201ENST00000293748 SETQ01105 290 aaPredicted RBP14.39□□□□□ -0.11
SYNGAP1-201ENST00000293748 AAMPQ13685 434 aa14.39□□□□□ -0.11
SYNGAP1-201ENST00000293748 RGS12O14924 1447 aa14.39□□□□□ -0.11
SYNGAP1-201ENST00000293748 STK32BQ9NY57 414 aa14.38□□□□□ -0.11
SYNGAP1-201ENST00000293748 PLEKHG2Q9H7P9 1386 aa14.38□□□□□ -0.11
SYNGAP1-201ENST00000293748 NUCB2P80303 420 aa14.38□□□□□ -0.11
SYNGAP1-201ENST00000293748 FAM182BQ5T319 152 aa14.38□□□□□ -0.11
SYNGAP1-201ENST00000293748 TNS2Q63HR2 1409 aa14.38□□□□□ -0.11
SYNGAP1-201ENST00000293748 GORABQ5T7V8 394 aa14.38□□□□□ -0.11
SYNGAP1-201ENST00000293748 DDX19BQ9UMR2 479 aa14.38□□□□□ -0.11
SYNGAP1-201ENST00000293748 PLCH1Q4KWH8 1693 aa14.37□□□□□ -0.11
SYNGAP1-201ENST00000293748 PRIM1P49642 420 aaKnown RBP14.37□□□□□ -0.11
SYNGAP1-201ENST00000293748 RIPK4P57078 832 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms