RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 WASF1Q92558 559 aa20.34■□□□□ 0.85
SHANK1-201ENST00000293441 IFIT5Q13325 482 aaKnown RBP20.34■□□□□ 0.85
SHANK1-201ENST00000293441 ERCC4Q92889 916 aaPredicted RBP20.33■□□□□ 0.85
SHANK1-201ENST00000293441 WASLO00401 505 aaPredicted RBP20.33■□□□□ 0.85
SHANK1-201ENST00000293441 KRT28Q7Z3Y7 464 aa20.33■□□□□ 0.85
SHANK1-201ENST00000293441 CEP57L1Q8IYX8 460 aa20.33■□□□□ 0.85
SHANK1-201ENST00000293441 ZNF287Q9HBT7 754 aa20.33■□□□□ 0.84
SHANK1-201ENST00000293441 SEC63Q9UGP8 760 aaKnown RBP20.33■□□□□ 0.84
SHANK1-201ENST00000293441 CHMP4BP1P59074 171 aa20.33■□□□□ 0.84
SHANK1-201ENST00000293441 RAB11FIP3O75154 756 aa20.32■□□□□ 0.84
SHANK1-201ENST00000293441 NOM1Q5C9Z4 860 aaKnown RBP20.32■□□□□ 0.84
SHANK1-201ENST00000293441 EXOC5O00471 708 aa20.32■□□□□ 0.84
SHANK1-201ENST00000293441 F6X3S4 739 aa20.32■□□□□ 0.84
SHANK1-201ENST00000293441 CFAP45Q9UL16 551 aa20.32■□□□□ 0.84
SHANK1-201ENST00000293441 GPTP24298 496 aa20.32■□□□□ 0.84
SHANK1-201ENST00000293441 CUL7Q14999 1698 aa20.31■□□□□ 0.84
SHANK1-201ENST00000293441 LUC7LQ9NQ29 371 aaKnown RBP20.31■□□□□ 0.84
SHANK1-201ENST00000293441 MX1P20591 662 aa20.31■□□□□ 0.84
SHANK1-201ENST00000293441 SLC5A1P13866 664 aa20.3■□□□□ 0.84
SHANK1-201ENST00000293441 MPNDQ8N594 471 aa20.3■□□□□ 0.84
SHANK1-201ENST00000293441 ADGRF5Q8IZF2 1346 aa20.3■□□□□ 0.84
SHANK1-201ENST00000293441 NAPBQ9H115 298 aa20.3■□□□□ 0.84
SHANK1-201ENST00000293441 U3KPZ7 1027 aaPredicted RBP20.3■□□□□ 0.84
SHANK1-201ENST00000293441 TTLL12Q14166 644 aaPredicted RBP20.3■□□□□ 0.84
SHANK1-201ENST00000293441 CCDC8Q9H0W5 538 aaPredicted RBP20.3■□□□□ 0.84
SHANK1-201ENST00000293441 NAIPQ13075 1403 aa20.3■□□□□ 0.84
SHANK1-201ENST00000293441 HSP90AB3PQ58FF7 597 aa20.3■□□□□ 0.84
SHANK1-201ENST00000293441 PPP6R1Q9UPN7 881 aa20.29■□□□□ 0.84
SHANK1-201ENST00000293441 GLRX3O76003 335 aaKnown RBP20.29■□□□□ 0.84
SHANK1-201ENST00000293441 CCDC181Q5TID7 509 aa20.29■□□□□ 0.84
SHANK1-201ENST00000293441 FAM177A1Q8N128 213 aaPredicted RBP20.29■□□□□ 0.84
SHANK1-201ENST00000293441 NEFHP12036 1026 aa20.29■□□□□ 0.84
SHANK1-201ENST00000293441 PRPF40BQ6NWY9 871 aaKnown RBP20.29■□□□□ 0.84
SHANK1-201ENST00000293441 LRPPRCP42704 1394 aaKnown RBP20.29■□□□□ 0.84
SHANK1-201ENST00000293441 IDI1Q13907 227 aa20.28■□□□□ 0.84
SHANK1-201ENST00000293441 LAMC3Q9Y6N6 1575 aa20.28■□□□□ 0.84
SHANK1-201ENST00000293441 ANKRD18BA2A2Z9 1011 aa20.28■□□□□ 0.84
SHANK1-201ENST00000293441 ZBTB3Q9H5J0 574 aa20.28■□□□□ 0.84
SHANK1-201ENST00000293441 MAP3K12Q12852 859 aa20.28■□□□□ 0.84
SHANK1-201ENST00000293441 CEP131Q9UPN4 1083 aa20.28■□□□□ 0.84
SHANK1-201ENST00000293441 ERLIN2O94905 339 aa20.27■□□□□ 0.84
SHANK1-201ENST00000293441 RANBP6O60518 1105 aaKnown RBP20.27■□□□□ 0.84
SHANK1-201ENST00000293441 CCDC96Q2M329 555 aa20.27■□□□□ 0.84
SHANK1-201ENST00000293441 HYPKQ9NX55 129 aa20.27■□□□□ 0.84
SHANK1-201ENST00000293441 LRRFIP2Q9Y608 721 aaKnown RBP20.27■□□□□ 0.84
SHANK1-201ENST00000293441 CBFA2T2O43439 604 aa20.27■□□□□ 0.84
SHANK1-201ENST00000293441 CCDC83Q8IWF9 413 aa20.27■□□□□ 0.84
SHANK1-201ENST00000293441 SSH1Q8WYL5 1049 aa20.27■□□□□ 0.84
SHANK1-201ENST00000293441 ZNF444Q8N0Y2 327 aaPredicted RBP20.27■□□□□ 0.83
SHANK1-201ENST00000293441 DNAAF4Q8WXU2 420 aa20.27■□□□□ 0.83
SHANK1-201ENST00000293441 ABCA10Q8WWZ4 1543 aa20.26■□□□□ 0.83
SHANK1-201ENST00000293441 TNIP1Q15025 636 aa20.26■□□□□ 0.83
SHANK1-201ENST00000293441 BACH2Q9BYV9 841 aa20.26■□□□□ 0.83
SHANK1-201ENST00000293441 PAXIP1Q6ZW49 1069 aaPredicted RBP20.26■□□□□ 0.83
SHANK1-201ENST00000293441 NUP62CLQ9H1M0 184 aa20.26■□□□□ 0.83
SHANK1-201ENST00000293441 A0A087WZG4 1122 aa20.26■□□□□ 0.83
SHANK1-201ENST00000293441 ABCC5O15440 1437 aa20.25■□□□□ 0.83
SHANK1-201ENST00000293441 C6orf229H3BNL8 230 aa20.25■□□□□ 0.83
SHANK1-201ENST00000293441 WDR78Q5VTH9 848 aa20.25■□□□□ 0.83
SHANK1-201ENST00000293441 ALDH1L2Q3SY69 923 aa20.25■□□□□ 0.83
SHANK1-201ENST00000293441 NOS1P29475 1434 aa20.24■□□□□ 0.83
SHANK1-201ENST00000293441 DHX8Q14562 1220 aaKnown RBP20.24■□□□□ 0.83
SHANK1-201ENST00000293441 GRIN2AQ12879 1464 aa20.24■□□□□ 0.83
SHANK1-201ENST00000293441 SCLT1Q96NL6 688 aa20.24■□□□□ 0.83
SHANK1-201ENST00000293441 AXDND1Q5T1B0 1012 aaPredicted RBP20.24■□□□□ 0.83
SHANK1-201ENST00000293441 VSIG10Q8N0Z9 540 aa20.24■□□□□ 0.83
SHANK1-201ENST00000293441 CCDC82Q8N4S0 544 aa20.24■□□□□ 0.83
SHANK1-201ENST00000293441 MAP3K2Q9Y2U5 619 aa20.24■□□□□ 0.83
SHANK1-201ENST00000293441 TXLNBQ8N3L3 684 aa20.23■□□□□ 0.83
SHANK1-201ENST00000293441 DBF4Q9UBU7 674 aaPredicted RBP20.23■□□□□ 0.83
SHANK1-201ENST00000293441 CHRNA2Q15822 529 aa20.23■□□□□ 0.83
SHANK1-201ENST00000293441 UPF3BQ9BZI7 483 aaKnown RBP20.22■□□□□ 0.83
SHANK1-201ENST00000293441 MYCNP04198 464 aaPredicted RBP20.22■□□□□ 0.83
SHANK1-201ENST00000293441 RARSP54136 660 aaKnown RBP20.22■□□□□ 0.83
SHANK1-201ENST00000293441 DENND4BO75064 1496 aaPredicted RBP20.22■□□□□ 0.83
SHANK1-201ENST00000293441 ZNF213O14771 459 aa20.22■□□□□ 0.83
SHANK1-201ENST00000293441 EIF5P55010 431 aaKnown RBP20.22■□□□□ 0.83
SHANK1-201ENST00000293441 FERMT3Q86UX7 667 aa20.22■□□□□ 0.83
SHANK1-201ENST00000293441 ABCC11Q96J66 1382 aa20.22■□□□□ 0.83
SHANK1-201ENST00000293441 ANKRD62A6NC57 917 aa20.22■□□□□ 0.83
SHANK1-201ENST00000293441 SEPT7Q16181 437 aaKnown RBP20.22■□□□□ 0.83
SHANK1-201ENST00000293441 FANCAO15360 1455 aa20.21■□□□□ 0.83
SHANK1-201ENST00000293441 SSR1P43307 286 aaKnown RBP20.21■□□□□ 0.83
SHANK1-201ENST00000293441 CAMK4Q16566 473 aa20.21■□□□□ 0.83
SHANK1-201ENST00000293441 ATP5J2-PTCD1G3V325 749 aa20.21■□□□□ 0.83
SHANK1-201ENST00000293441 GUCY1B3Q02153 619 aa20.21■□□□□ 0.83
SHANK1-201ENST00000293441 CTCFLQ8NI51 663 aaPredicted RBP20.21■□□□□ 0.83
SHANK1-201ENST00000293441 NEBLO76041 1014 aa20.21■□□□□ 0.83
SHANK1-201ENST00000293441 IFNL2Q8IZJ0 200 aa20.21■□□□□ 0.83
SHANK1-201ENST00000293441 IQCA1Q86XH1 822 aa20.2■□□□□ 0.82
SHANK1-201ENST00000293441 SLF2Q8IX21 1173 aa20.2■□□□□ 0.82
SHANK1-201ENST00000293441 ANKRD24Q8TF21 1146 aa20.2■□□□□ 0.82
SHANK1-201ENST00000293441 SLC4A8Q2Y0W8 1093 aa20.2■□□□□ 0.82
SHANK1-201ENST00000293441 SLC12A7Q9Y666 1083 aa20.2■□□□□ 0.82
SHANK1-201ENST00000293441 WDHD1O75717 1129 aaPredicted RBP20.2■□□□□ 0.82
SHANK1-201ENST00000293441 DESP17661 470 aa20.2■□□□□ 0.82
SHANK1-201ENST00000293441 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.2■□□□□ 0.82
SHANK1-201ENST00000293441 RFC4P35249 363 aa20.19■□□□□ 0.82
SHANK1-201ENST00000293441 CUL5Q93034 780 aa20.19■□□□□ 0.82
SHANK1-201ENST00000293441 ZNF622Q969S3 477 aaKnown RBP eCLIP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms