RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 RIMS2Q9UQ26 1411 aa5.73□□□□□ -1.49
UBR1-201ENST00000290650 NUCB1Q02818 461 aa5.73□□□□□ -1.49
UBR1-201ENST00000290650 ALDH1L2Q3SY69 923 aa5.73□□□□□ -1.49
UBR1-201ENST00000290650 HSP90AB3PQ58FF7 597 aa5.73□□□□□ -1.49
UBR1-201ENST00000290650 TTC21BQ7Z4L5 1316 aa5.73□□□□□ -1.49
UBR1-201ENST00000290650 CT47B1P0C2W7 299 aaPredicted RBP5.73□□□□□ -1.49
UBR1-201ENST00000290650 SASS6Q6UVJ0 657 aa5.73□□□□□ -1.49
UBR1-201ENST00000290650 KIF6Q6ZMV9 814 aa5.73□□□□□ -1.49
UBR1-201ENST00000290650 KLHL34Q8N239 644 aa5.73□□□□□ -1.49
UBR1-201ENST00000290650 TPD52L1Q16890 204 aaPredicted RBP5.73□□□□□ -1.49
UBR1-201ENST00000290650 ZMYM4Q5VZL5 1548 aa5.73□□□□□ -1.49
UBR1-201ENST00000290650 CWF19L2Q2TBE0 894 aaKnown RBP5.73□□□□□ -1.49
UBR1-201ENST00000290650 LARP1BQ659C4 914 aaKnown RBP5.73□□□□□ -1.49
UBR1-201ENST00000290650 PDRG1Q9NUG6 133 aa5.73□□□□□ -1.49
UBR1-201ENST00000290650 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.73□□□□□ -1.49
UBR1-201ENST00000290650 CYP46A1Q9Y6A2 500 aa5.73□□□□□ -1.49
UBR1-201ENST00000290650 VAMP4O75379 141 aa5.72□□□□□ -1.49
UBR1-201ENST00000290650 CPA1P15085 419 aa5.72□□□□□ -1.49
UBR1-201ENST00000290650 AAMPQ13685 434 aa5.72□□□□□ -1.49
UBR1-201ENST00000290650 CCDC144CPQ8IYA2 1237 aa5.72□□□□□ -1.49
UBR1-201ENST00000290650 MARCH6O60337 910 aa5.72□□□□□ -1.49
UBR1-201ENST00000290650 SYNE3Q6ZMZ3 975 aa5.72□□□□□ -1.49
UBR1-201ENST00000290650 NECAB1Q8N987 351 aa5.72□□□□□ -1.49
UBR1-201ENST00000290650 CCT2P78371 535 aaKnown RBP5.72□□□□□ -1.49
UBR1-201ENST00000290650 TRIM29Q14134 588 aa5.72□□□□□ -1.49
UBR1-201ENST00000290650 NDUFB9Q9Y6M9 179 aa5.72□□□□□ -1.49
UBR1-201ENST00000290650 ARHGEF12Q9NZN5 1544 aa5.72□□□□□ -1.49
UBR1-201ENST00000290650 UBE3BQ7Z3V4 1068 aa5.72□□□□□ -1.49
UBR1-201ENST00000290650 KRT28Q7Z3Y7 464 aa5.72□□□□□ -1.49
UBR1-201ENST00000290650 SHANK2Q9UPX8 1470 aa5.72□□□□□ -1.49
UBR1-201ENST00000290650 ADGRL2O95490 1459 aa5.72□□□□□ -1.49
UBR1-201ENST00000290650 IDH1O75874 414 aaKnown RBP5.72□□□□□ -1.49
UBR1-201ENST00000290650 HSPA2P54652 639 aa5.72□□□□□ -1.49
UBR1-201ENST00000290650 HAND2P61296 217 aa5.72□□□□□ -1.49
UBR1-201ENST00000290650 ANKRD24Q8TF21 1146 aa5.72□□□□□ -1.49
UBR1-201ENST00000290650 KDM2BQ8NHM5 1336 aa5.72□□□□□ -1.49
UBR1-201ENST00000290650 RPAP2Q8IXW5 612 aaPredicted RBP5.72□□□□□ -1.49
UBR1-201ENST00000290650 DNAAF4Q8WXU2 420 aa5.72□□□□□ -1.49
UBR1-201ENST00000290650 SDF4Q9BRK5 362 aa5.72□□□□□ -1.49
UBR1-201ENST00000290650 TSPY26PQ9H489 355 aa5.72□□□□□ -1.49
UBR1-201ENST00000290650 TFIP11Q9UBB9 837 aaKnown RBP5.72□□□□□ -1.49
UBR1-201ENST00000290650 TPM4P67936 248 aa5.71□□□□□ -1.49
UBR1-201ENST00000290650 CCDC57Q2TAC2 916 aa5.71□□□□□ -1.49
UBR1-201ENST00000290650 ZGPATQ8N5A5 531 aaKnown RBP5.71□□□□□ -1.49
UBR1-201ENST00000290650 PODXL2Q9NZ53 605 aa5.71□□□□□ -1.49
UBR1-201ENST00000290650 MSH6P52701 1360 aa5.71□□□□□ -1.49
UBR1-201ENST00000290650 KLHDC4Q8TBB5 520 aa5.71□□□□□ -1.49
UBR1-201ENST00000290650 NUP133Q8WUM0 1156 aa5.71□□□□□ -1.49
UBR1-201ENST00000290650 CHAMP1Q96JM3 812 aa5.71□□□□□ -1.49
UBR1-201ENST00000290650 EYA1Q99502 592 aa5.71□□□□□ -1.49
UBR1-201ENST00000290650 TRIM5Q9C035 493 aa5.71□□□□□ -1.49
UBR1-201ENST00000290650 TTC22Q5TAA0 569 aa5.71□□□□□ -1.5
UBR1-201ENST00000290650 ZCCHC11Q5TAX3 1644 aaKnown RBP5.71□□□□□ -1.5
UBR1-201ENST00000290650 NPATQ14207 1427 aa5.71□□□□□ -1.5
UBR1-201ENST00000290650 KCNA6P17658 529 aa5.71□□□□□ -1.5
UBR1-201ENST00000290650 BRPF1P55201 1214 aaPredicted RBP5.71□□□□□ -1.5
UBR1-201ENST00000290650 PDILTQ8N807 584 aa5.71□□□□□ -1.5
UBR1-201ENST00000290650 TNRQ92752 1358 aa5.71□□□□□ -1.5
UBR1-201ENST00000290650 YTHDC2Q9H6S0 1430 aaKnown RBP5.71□□□□□ -1.5
UBR1-201ENST00000290650 CHST3Q7LGC8 479 aa5.71□□□□□ -1.5
UBR1-201ENST00000290650 ZBTB9Q96C00 473 aa5.71□□□□□ -1.5
UBR1-201ENST00000290650 MBD5Q9P267 1494 aa5.71□□□□□ -1.5
UBR1-201ENST00000290650 ISM2Q6H9L7 571 aa5.71□□□□□ -1.5
UBR1-201ENST00000290650 A0A087WZG4 1122 aa5.71□□□□□ -1.5
UBR1-201ENST00000290650 BLOC1S2Q6QNY1 142 aa5.71□□□□□ -1.5
UBR1-201ENST00000290650 PSMA5P28066 241 aa5.7□□□□□ -1.5
UBR1-201ENST00000290650 ME1P48163 572 aa5.7□□□□□ -1.5
UBR1-201ENST00000290650 CKAP2LQ8IYA6 745 aa5.7□□□□□ -1.5
UBR1-201ENST00000290650 FAM177A1Q8N128 213 aaPredicted RBP5.7□□□□□ -1.5
UBR1-201ENST00000290650 NFATC2IPQ8NCF5 419 aa5.7□□□□□ -1.5
UBR1-201ENST00000290650 LGR6Q9HBX8 967 aa5.7□□□□□ -1.5
UBR1-201ENST00000290650 ABCF2Q9UG63 623 aa5.7□□□□□ -1.5
UBR1-201ENST00000290650 KIF3AQ9Y496 699 aa5.7□□□□□ -1.5
UBR1-201ENST00000290650 YEATS2Q9ULM3 1422 aa5.7□□□□□ -1.5
UBR1-201ENST00000290650 CDC42BPBQ9Y5S2 1711 aa5.7□□□□□ -1.5
UBR1-201ENST00000290650 DDX46Q7L014 1031 aaKnown RBP5.7□□□□□ -1.5
UBR1-201ENST00000290650 HOMER1Q86YM7 354 aa5.7□□□□□ -1.5
UBR1-201ENST00000290650 KIF1BPQ96EK5 621 aa5.7□□□□□ -1.5
UBR1-201ENST00000290650 ZBTB40Q9NUA8 1239 aa5.7□□□□□ -1.5
UBR1-201ENST00000290650 MAP3K19Q56UN5 1328 aa5.7□□□□□ -1.5
UBR1-201ENST00000290650 POLR3AO14802 1390 aaPredicted RBP5.7□□□□□ -1.5
UBR1-201ENST00000290650 ACSBG1Q96GR2 724 aa5.7□□□□□ -1.5
UBR1-201ENST00000290650 ZNF830Q96NB3 372 aaPredicted RBP5.7□□□□□ -1.5
UBR1-201ENST00000290650 IQSEC3Q9UPP2 1182 aaPredicted RBP5.7□□□□□ -1.5
UBR1-201ENST00000290650 ERICH2A1L162 156 aa5.7□□□□□ -1.5
UBR1-201ENST00000290650 GOLIM4O00461 696 aa5.7□□□□□ -1.5
UBR1-201ENST00000290650 SMC2O95347 1197 aa5.7□□□□□ -1.5
UBR1-201ENST00000290650 CCDC73Q6ZRK6 1079 aa5.7□□□□□ -1.5
UBR1-201ENST00000290650 ATP10AO60312 1499 aa5.7□□□□□ -1.5
UBR1-201ENST00000290650 ATP2B2Q01814 1243 aa5.7□□□□□ -1.5
UBR1-201ENST00000290650 CCDC158Q5M9N0 1113 aa5.7□□□□□ -1.5
UBR1-201ENST00000290650 PCMTD1Q96MG8 357 aaPredicted RBP5.7□□□□□ -1.5
UBR1-201ENST00000290650 ORAI2Q96SN7 254 aa5.7□□□□□ -1.5
UBR1-201ENST00000290650 TMX4Q9H1E5 349 aaPredicted RBP5.7□□□□□ -1.5
UBR1-201ENST00000290650 ABCA8O94911 1581 aa5.7□□□□□ -1.5
UBR1-201ENST00000290650 ABCC11Q96J66 1382 aa5.7□□□□□ -1.5
UBR1-201ENST00000290650 XRCC6P12956 609 aaKnown RBP eCLIP5.7□□□□□ -1.5
UBR1-201ENST00000290650 RRAGDQ9NQL2 400 aaPredicted RBP5.69□□□□□ -1.5
UBR1-201ENST00000290650 ZMYM3Q14202 1370 aa5.69□□□□□ -1.5
UBR1-201ENST00000290650 RAB11FIP3O75154 756 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms