RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 PANK1Q8TE04 598 aa17.31■□□□□ 0.36
SEC16A-202ENST00000290037 CDK19Q9BWU1 502 aa17.31■□□□□ 0.36
SEC16A-202ENST00000290037 TAOK2Q9UL54 1235 aa17.31■□□□□ 0.36
SEC16A-202ENST00000290037 BABAM1Q9NWV8 329 aa17.31■□□□□ 0.36
SEC16A-202ENST00000290037 GOLIM4O00461 696 aa17.31■□□□□ 0.36
SEC16A-202ENST00000290037 GOLGA6L10A0A0M3HER8 536 aa17.31■□□□□ 0.36
SEC16A-202ENST00000290037 EHMT1Q9H9B1 1298 aa17.31■□□□□ 0.36
SEC16A-202ENST00000290037 NOB1Q9ULX3 412 aaKnown RBP17.31■□□□□ 0.36
SEC16A-202ENST00000290037 ADGRL2O95490 1459 aa17.31■□□□□ 0.36
SEC16A-202ENST00000290037 NAP1L1P55209 391 aaKnown RBP17.3■□□□□ 0.36
SEC16A-202ENST00000290037 H0YHG0 523 aa17.3■□□□□ 0.36
SEC16A-202ENST00000290037 STARD3NLO95772 234 aa17.3■□□□□ 0.36
SEC16A-202ENST00000290037 ZSCAN16Q9H4T2 348 aaPredicted RBP17.3■□□□□ 0.36
SEC16A-202ENST00000290037 MCM4P33991 863 aa17.3■□□□□ 0.36
SEC16A-202ENST00000290037 FAM114A1Q8IWE2 563 aa17.3■□□□□ 0.36
SEC16A-202ENST00000290037 GPATCH8Q9UKJ3 1502 aaKnown RBP17.3■□□□□ 0.36
SEC16A-202ENST00000290037 HSP90AB2PQ58FF8 381 aa17.29■□□□□ 0.36
SEC16A-202ENST00000290037 PRAM1Q96QH2 718 aa17.29■□□□□ 0.36
SEC16A-202ENST00000290037 SPATA32Q96LK8 384 aa17.29■□□□□ 0.36
SEC16A-202ENST00000290037 HDAC1Q13547 482 aaPredicted RBP17.29■□□□□ 0.36
SEC16A-202ENST00000290037 LARP1BQ659C4 914 aaKnown RBP17.29■□□□□ 0.36
SEC16A-202ENST00000290037 FMNL2Q96PY5 1086 aa17.29■□□□□ 0.36
SEC16A-202ENST00000290037 SOGA3Q5TF21 947 aa17.29■□□□□ 0.36
SEC16A-202ENST00000290037 PRIMPOLQ96LW4 560 aa17.29■□□□□ 0.36
SEC16A-202ENST00000290037 SAMD9Q5K651 1589 aa17.29■□□□□ 0.36
SEC16A-202ENST00000290037 ZNF644Q9H582 1327 aaPredicted RBP17.28■□□□□ 0.36
SEC16A-202ENST00000290037 TNIP1Q15025 636 aa17.28■□□□□ 0.36
SEC16A-202ENST00000290037 NEUROD6Q96NK8 337 aa17.28■□□□□ 0.36
SEC16A-202ENST00000290037 PIK3R4Q99570 1358 aa17.28■□□□□ 0.36
SEC16A-202ENST00000290037 TMPOP42166 694 aaKnown RBP17.27■□□□□ 0.36
SEC16A-202ENST00000290037 MICALCLQ6ZW33 695 aa17.27■□□□□ 0.36
SEC16A-202ENST00000290037 PAXBP1Q9Y5B6 917 aa17.27■□□□□ 0.36
SEC16A-202ENST00000290037 SERPINC1P01008 464 aa17.27■□□□□ 0.36
SEC16A-202ENST00000290037 CEP126Q9P2H0 1117 aa17.27■□□□□ 0.36
SEC16A-202ENST00000290037 EXOSC9Q06265 439 aaKnown RBP17.27■□□□□ 0.35
SEC16A-202ENST00000290037 KIF18AQ8NI77 898 aa17.27■□□□□ 0.35
SEC16A-202ENST00000290037 NLRP2Q9NX02 1062 aa17.27■□□□□ 0.35
SEC16A-202ENST00000290037 FILIP1Q7Z7B0 1213 aa17.27■□□□□ 0.35
SEC16A-202ENST00000290037 TXNDC2Q86VQ3 553 aa17.27■□□□□ 0.35
SEC16A-202ENST00000290037 PDRG1Q9NUG6 133 aa17.27■□□□□ 0.35
SEC16A-202ENST00000290037 POLR3AO14802 1390 aaPredicted RBP17.27■□□□□ 0.35
SEC16A-202ENST00000290037 CCDC172P0C7W6 258 aa17.26■□□□□ 0.35
SEC16A-202ENST00000290037 SLC4A2P04920 1241 aa17.26■□□□□ 0.35
SEC16A-202ENST00000290037 GBP2P32456 591 aaPredicted RBP17.26■□□□□ 0.35
SEC16A-202ENST00000290037 CGNQ9P2M7 1197 aaKnown RBP17.26■□□□□ 0.35
SEC16A-202ENST00000290037 TRPM2O94759 1503 aa17.26■□□□□ 0.35
SEC16A-202ENST00000290037 CCDC171Q6TFL3 1326 aa17.26■□□□□ 0.35
SEC16A-202ENST00000290037 SLC26A8Q96RN1 970 aa17.26■□□□□ 0.35
SEC16A-202ENST00000290037 CERS3Q8IU89 383 aa17.26■□□□□ 0.35
SEC16A-202ENST00000290037 UBAC1Q9BSL1 405 aa17.26■□□□□ 0.35
SEC16A-202ENST00000290037 SRRTQ9BXP5 876 aaKnown RBP17.26■□□□□ 0.35
SEC16A-202ENST00000290037 FOXD4L1Q9NU39 408 aa17.26■□□□□ 0.35
SEC16A-202ENST00000290037 ME1P48163 572 aa17.25■□□□□ 0.35
SEC16A-202ENST00000290037 CCDC181Q5TID7 509 aa17.25■□□□□ 0.35
SEC16A-202ENST00000290037 UPF3BQ9BZI7 483 aaKnown RBP17.25■□□□□ 0.35
SEC16A-202ENST00000290037 KDM5DQ9BY66 1539 aa17.25■□□□□ 0.35
SEC16A-202ENST00000290037 A6NNZ2 444 aa17.25■□□□□ 0.35
SEC16A-202ENST00000290037 ESPNB1AK53 854 aa17.25■□□□□ 0.35
SEC16A-202ENST00000290037 TUBB8Q3ZCM7 444 aa17.25■□□□□ 0.35
SEC16A-202ENST00000290037 SFPQP23246 707 aaKnown RBP eCLIP17.25■□□□□ 0.35
SEC16A-202ENST00000290037 SENP3Q9H4L4 574 aaPredicted RBP17.25■□□□□ 0.35
SEC16A-202ENST00000290037 CABP2Q9NPB3 220 aa17.25■□□□□ 0.35
SEC16A-202ENST00000290037 WDR7Q9Y4E6 1490 aa17.25■□□□□ 0.35
SEC16A-202ENST00000290037 ZFYP08048 801 aaPredicted RBP17.25■□□□□ 0.35
SEC16A-202ENST00000290037 CFAP70Q5T0N1 1121 aa17.25■□□□□ 0.35
SEC16A-202ENST00000290037 NAA15Q9BXJ9 866 aaKnown RBP17.25■□□□□ 0.35
SEC16A-202ENST00000290037 PLCH2O75038 1416 aa17.25■□□□□ 0.35
SEC16A-202ENST00000290037 URB2Q14146 1524 aaKnown RBP17.25■□□□□ 0.35
SEC16A-202ENST00000290037 STXBP4Q6ZWJ1 553 aa17.25■□□□□ 0.35
SEC16A-202ENST00000290037 IFI16Q16666 785 aaKnown RBP17.24■□□□□ 0.35
SEC16A-202ENST00000290037 TAOK3Q9H2K8 898 aa17.24■□□□□ 0.35
SEC16A-202ENST00000290037 TRAPPC8Q9Y2L5 1435 aa17.24■□□□□ 0.35
SEC16A-202ENST00000290037 AMPD3Q01432 767 aa17.24■□□□□ 0.35
SEC16A-202ENST00000290037 TMTC2Q8N394 836 aa17.24■□□□□ 0.35
SEC16A-202ENST00000290037 CCDC150Q8NCX0 1101 aa17.24■□□□□ 0.35
SEC16A-202ENST00000290037 HMGB1P1B2RPK0 211 aaPredicted RBP17.24■□□□□ 0.35
SEC16A-202ENST00000290037 MX1P20591 662 aa17.24■□□□□ 0.35
SEC16A-202ENST00000290037 MPHOSPH8Q99549 860 aa17.24■□□□□ 0.35
SEC16A-202ENST00000290037 A0A087WZG4 1122 aa17.23■□□□□ 0.35
SEC16A-202ENST00000290037 EVI5LQ96CN4 794 aa17.23■□□□□ 0.35
SEC16A-202ENST00000290037 ELL2O00472 640 aaPredicted RBP17.23■□□□□ 0.35
SEC16A-202ENST00000290037 CABP4P57796 275 aa17.23■□□□□ 0.35
SEC16A-202ENST00000290037 CTAGE1Q96RT6 745 aa17.23■□□□□ 0.35
SEC16A-202ENST00000290037 CNNM1Q9NRU3 951 aa17.23■□□□□ 0.35
SEC16A-202ENST00000290037 NF2P35240 595 aa17.23■□□□□ 0.35
SEC16A-202ENST00000290037 GGNBP2Q9H3C7 697 aa17.23■□□□□ 0.35
SEC16A-202ENST00000290037 PRAG1Q86YV5 1406 aa17.23■□□□□ 0.35
SEC16A-202ENST00000290037 TAF7Q15545 349 aaPredicted RBP17.22■□□□□ 0.35
SEC16A-202ENST00000290037 TSG101Q99816 390 aa17.22■□□□□ 0.35
SEC16A-202ENST00000290037 ZNF530Q6P9A1 599 aaPredicted RBP17.22■□□□□ 0.35
SEC16A-202ENST00000290037 IGHMBP2P38935 993 aaKnown RBP17.22■□□□□ 0.35
SEC16A-202ENST00000290037 CCDC91Q7Z6B0 441 aa17.22■□□□□ 0.35
SEC16A-202ENST00000290037 KIF5BP33176 963 aa17.22■□□□□ 0.35
SEC16A-202ENST00000290037 CETN1Q12798 172 aa17.22■□□□□ 0.35
SEC16A-202ENST00000290037 MYO1BO43795 1136 aa17.22■□□□□ 0.35
SEC16A-202ENST00000290037 HOXA7P31268 230 aaPredicted RBP17.22■□□□□ 0.35
SEC16A-202ENST00000290037 FKBP15Q5T1M5 1219 aa17.22■□□□□ 0.35
SEC16A-202ENST00000290037 PARD3Q8TEW0 1356 aa17.21■□□□□ 0.35
SEC16A-202ENST00000290037 PLVAPQ9BX97 442 aa17.21■□□□□ 0.35
SEC16A-202ENST00000290037 KRT18P05783 430 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms