RNA–Protein interactions for RNA: ENST00000289577.9

TMED4-201, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2 BASIC

Gene TMED4, Length 2,203 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-201ENST00000289577 ARHGEF10O15013 1369 aa24.81■■□□□ 1.56
TMED4-201ENST00000289577 F6X3S4 739 aa24.81■■□□□ 1.56
TMED4-201ENST00000289577 VSIG10Q8N0Z9 540 aa24.81■■□□□ 1.56
TMED4-201ENST00000289577 SLC4A10Q6U841 1118 aa24.8■■□□□ 1.56
TMED4-201ENST00000289577 SSH2Q76I76 1423 aa24.8■■□□□ 1.56
TMED4-201ENST00000289577 MCCP23508 829 aa24.8■■□□□ 1.56
TMED4-201ENST00000289577 HSP90AB2PQ58FF8 381 aa24.8■■□□□ 1.56
TMED4-201ENST00000289577 PALD1Q9ULE6 856 aa24.79■■□□□ 1.56
TMED4-201ENST00000289577 LRRCC1Q9C099 1032 aa24.78■■□□□ 1.56
TMED4-201ENST00000289577 MIS18AQ9NYP9 233 aa24.78■■□□□ 1.56
TMED4-201ENST00000289577 CCDC39Q9UFE4 941 aa24.78■■□□□ 1.56
TMED4-201ENST00000289577 EXOC6BQ9Y2D4 811 aa24.78■■□□□ 1.56
TMED4-201ENST00000289577 USP31Q70CQ4 1352 aa24.78■■□□□ 1.56
TMED4-201ENST00000289577 MX1P20591 662 aa24.78■■□□□ 1.56
TMED4-201ENST00000289577 CHMLP26374 656 aa24.78■■□□□ 1.56
TMED4-201ENST00000289577 FOXD4L5Q5VV16 416 aaPredicted RBP24.77■■□□□ 1.56
TMED4-201ENST00000289577 FOXD4L4Q8WXT5 416 aaPredicted RBP24.77■■□□□ 1.56
TMED4-201ENST00000289577 STAP2Q9UGK3 403 aa24.77■■□□□ 1.56
TMED4-201ENST00000289577 TSPYL4Q9UJ04 414 aa24.77■■□□□ 1.56
TMED4-201ENST00000289577 TSHZ3Q63HK5 1081 aa24.77■■□□□ 1.56
TMED4-201ENST00000289577 R3HCC1Q9Y3T6 440 aaKnown RBP24.77■■□□□ 1.56
TMED4-201ENST00000289577 TOPAZ1Q8N9V7 1692 aa24.76■■□□□ 1.55
TMED4-201ENST00000289577 XPCQ01831 940 aaPredicted RBP24.76■■□□□ 1.55
TMED4-201ENST00000289577 CSPP1Q1MSJ5 1256 aa24.76■■□□□ 1.55
TMED4-201ENST00000289577 ATP8B2P98198 1209 aa24.75■■□□□ 1.55
TMED4-201ENST00000289577 MTHFSDQ2M296 383 aaKnown RBP24.74■■□□□ 1.55
TMED4-201ENST00000289577 MAP3K19Q56UN5 1328 aa24.74■■□□□ 1.55
TMED4-201ENST00000289577 PLEKHG3A1L390 1219 aa24.74■■□□□ 1.55
TMED4-201ENST00000289577 FOXO3O43524 673 aa24.74■■□□□ 1.55
TMED4-201ENST00000289577 GNAI3P08754 354 aa24.74■■□□□ 1.55
TMED4-201ENST00000289577 ZMYND15Q9H091 742 aa24.74■■□□□ 1.55
TMED4-201ENST00000289577 ACEP12821 1306 aa24.74■■□□□ 1.55
TMED4-201ENST00000289577 USP6P35125 1406 aa24.73■■□□□ 1.55
TMED4-201ENST00000289577 EPB41L2O43491 1005 aaKnown RBP24.73■■□□□ 1.55
TMED4-201ENST00000289577 SRCIN1Q9C0H9 1055 aa24.73■■□□□ 1.55
TMED4-201ENST00000289577 XRN1Q8IZH2 1706 aaKnown RBP24.73■■□□□ 1.55
TMED4-201ENST00000289577 RTF1Q92541 710 aaKnown RBP24.73■■□□□ 1.55
TMED4-201ENST00000289577 SYAP1Q96A49 352 aaPredicted RBP24.73■■□□□ 1.55
TMED4-201ENST00000289577 TSPY26PQ9H489 355 aa24.73■■□□□ 1.55
TMED4-201ENST00000289577 ANO2Q9NQ90 1003 aa24.73■■□□□ 1.55
TMED4-201ENST00000289577 PNMA6EA0A0J9YXQ4 647 aa24.72■■□□□ 1.55
TMED4-201ENST00000289577 ROBO2Q9HCK4 1378 aa24.72■■□□□ 1.55
TMED4-201ENST00000289577 AOX1Q06278 1338 aa24.71■■□□□ 1.55
TMED4-201ENST00000289577 KDRP35968 1356 aa24.71■■□□□ 1.55
TMED4-201ENST00000289577 STK31Q9BXU1 1019 aa24.7■■□□□ 1.55
TMED4-201ENST00000289577 RNF214Q8ND24 703 aa24.7■■□□□ 1.54
TMED4-201ENST00000289577 FMN2Q9NZ56 1722 aa24.7■■□□□ 1.54
TMED4-201ENST00000289577 N4BP2Q86UW6 1770 aaPredicted RBP24.69■■□□□ 1.54
TMED4-201ENST00000289577 RIMS1Q86UR5 1692 aaKnown RBP24.69■■□□□ 1.54
TMED4-201ENST00000289577 FAM208AQ9UK61 1670 aaKnown RBP24.69■■□□□ 1.54
TMED4-201ENST00000289577 FLIIQ13045 1269 aa24.69■■□□□ 1.54
TMED4-201ENST00000289577 RILPL2Q969X0 211 aa24.69■■□□□ 1.54
TMED4-201ENST00000289577 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.69■■□□□ 1.54
TMED4-201ENST00000289577 TRIM6-TRIM34B2RNG4 842 aa24.69■■□□□ 1.54
TMED4-201ENST00000289577 PLEKHG5O94827 1062 aa24.69■■□□□ 1.54
TMED4-201ENST00000289577 HDGFP51858 240 aaKnown RBP24.68■■□□□ 1.54
TMED4-201ENST00000289577 MAP7D2Q96T17 732 aa24.68■■□□□ 1.54
TMED4-201ENST00000289577 LRRC37A3O60309 1634 aa24.68■■□□□ 1.54
TMED4-201ENST00000289577 PHF14O94880 888 aa24.67■■□□□ 1.54
TMED4-201ENST00000289577 UNC5CLQ8IV45 518 aa24.67■■□□□ 1.54
TMED4-201ENST00000289577 WDR33Q9C0J8 1336 aaKnown RBP24.67■■□□□ 1.54
TMED4-201ENST00000289577 UQCRHLA0A096LP55 91 aa24.66■■□□□ 1.54
TMED4-201ENST00000289577 UQCRHP07919 91 aa24.66■■□□□ 1.54
TMED4-201ENST00000289577 HSPA4P34932 840 aa24.66■■□□□ 1.54
TMED4-201ENST00000289577 CCDC30Q5VVM6 783 aa24.66■■□□□ 1.54
TMED4-201ENST00000289577 TMEM87AQ8NBN3 555 aa24.66■■□□□ 1.54
TMED4-201ENST00000289577 HTATSF1O43719 755 aaKnown RBP24.66■■□□□ 1.54
TMED4-201ENST00000289577 NOL8Q76FK4 1167 aaKnown RBP24.66■■□□□ 1.54
TMED4-201ENST00000289577 UPF3BQ9BZI7 483 aaKnown RBP24.66■■□□□ 1.54
TMED4-201ENST00000289577 CACNA1FO60840 1977 aa24.65■■□□□ 1.54
TMED4-201ENST00000289577 GADD45BO75293 160 aaPredicted RBP24.65■■□□□ 1.54
TMED4-201ENST00000289577 RBM10P98175 930 aaKnown RBP24.65■■□□□ 1.54
TMED4-201ENST00000289577 FKBP5Q13451 457 aaPredicted RBP24.65■■□□□ 1.54
TMED4-201ENST00000289577 PKNOX2Q96KN3 472 aa24.65■■□□□ 1.54
TMED4-201ENST00000289577 USP48Q86UV5 1035 aa24.65■■□□□ 1.54
TMED4-201ENST00000289577 SBNO1A3KN83 1393 aa24.64■■□□□ 1.54
TMED4-201ENST00000289577 PXDNLA1KZ92 1463 aa24.64■■□□□ 1.54
TMED4-201ENST00000289577 LRRFIP2Q9Y608 721 aaKnown RBP24.64■■□□□ 1.54
TMED4-201ENST00000289577 FLT4P35916 1363 aa24.64■■□□□ 1.53
TMED4-201ENST00000289577 SOS1Q07889 1333 aaPredicted RBP24.64■■□□□ 1.53
TMED4-201ENST00000289577 IGSF1Q8N6C5 1336 aa24.64■■□□□ 1.53
TMED4-201ENST00000289577 DYNC1I1O14576 645 aa24.63■■□□□ 1.53
TMED4-201ENST00000289577 UVSSAQ2YD98 709 aa24.63■■□□□ 1.53
TMED4-201ENST00000289577 SASS6Q6UVJ0 657 aa24.63■■□□□ 1.53
TMED4-201ENST00000289577 IL25Q9H293 177 aa24.63■■□□□ 1.53
TMED4-201ENST00000289577 FAM184AQ8NB25 1140 aa24.63■■□□□ 1.53
TMED4-201ENST00000289577 CEP170BQ9Y4F5 1589 aaPredicted RBP24.63■■□□□ 1.53
TMED4-201ENST00000289577 RPAP1Q9BWH6 1393 aaPredicted RBP24.62■■□□□ 1.53
TMED4-201ENST00000289577 ADAMTS13Q76LX8 1427 aa24.62■■□□□ 1.53
TMED4-201ENST00000289577 SSH3Q8TE77 659 aa24.61■■□□□ 1.53
TMED4-201ENST00000289577 USP44Q9H0E7 712 aa24.61■■□□□ 1.53
TMED4-201ENST00000289577 GDPD2Q9HCC8 539 aa24.61■■□□□ 1.53
TMED4-201ENST00000289577 TTC21AQ8NDW8 1320 aa24.61■■□□□ 1.53
TMED4-201ENST00000289577 EYA1Q99502 592 aa24.61■■□□□ 1.53
TMED4-201ENST00000289577 FAM13BQ9NYF5 915 aa24.61■■□□□ 1.53
TMED4-201ENST00000289577 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.61■■□□□ 1.532e-8■■■□□ 16.8
TMED4-201ENST00000289577 MLECQ14165 292 aa24.6■■□□□ 1.53
TMED4-201ENST00000289577 KIAA2012Q0VF49 1180 aa24.59■■□□□ 1.53
TMED4-201ENST00000289577 TMEM2Q9UHN6 1383 aa24.59■■□□□ 1.53
TMED4-201ENST00000289577 SOX12O15370 315 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms