RNA–Protein interactions for RNA: ENST00000278460.11

C11orf49-201, Transcript of chromosome 11 open reading frame 49, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C11orf49, Length 1,645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-201ENST00000278460 ITPRIPQ8IWB1 547 aa24.8■■□□□ 1.56
C11orf49-201ENST00000278460 WNK3Q9BYP7 1800 aa24.8■■□□□ 1.56
C11orf49-201ENST00000278460 PTPRCP08575 1304 aa24.79■■□□□ 1.56
C11orf49-201ENST00000278460 BTBD11A6QL63 1104 aa24.79■■□□□ 1.56
C11orf49-201ENST00000278460 HSP90AB1P08238 724 aaKnown RBP24.79■■□□□ 1.56
C11orf49-201ENST00000278460 EIF4A1P60842 406 aaKnown RBP24.79■■□□□ 1.56
C11orf49-201ENST00000278460 CCDC30Q5VVM6 783 aa24.79■■□□□ 1.56
C11orf49-201ENST00000278460 LARP1Q6PKG0 1096 aaKnown RBP24.79■■□□□ 1.56
C11orf49-201ENST00000278460 STRN4Q9NRL3 753 aa24.79■■□□□ 1.56
C11orf49-201ENST00000278460 N4BP2Q86UW6 1770 aaPredicted RBP24.78■■□□□ 1.56
C11orf49-201ENST00000278460 HOXB7P09629 217 aa24.78■■□□□ 1.56
C11orf49-201ENST00000278460 NRAPQ86VF7 1730 aa24.77■■□□□ 1.56
C11orf49-201ENST00000278460 CYP27B1O15528 508 aa24.77■■□□□ 1.56
C11orf49-201ENST00000278460 RGS12O14924 1447 aa24.77■■□□□ 1.56
C11orf49-201ENST00000278460 IL2RBP14784 551 aa24.76■■□□□ 1.55
C11orf49-201ENST00000278460 PIP4K2BP78356 416 aa24.76■■□□□ 1.55
C11orf49-201ENST00000278460 CHMP4AQ9BY43 222 aa24.76■■□□□ 1.55
C11orf49-201ENST00000278460 CHMP4BQ9H444 224 aaKnown RBP24.76■■□□□ 1.55
C11orf49-201ENST00000278460 BTG4Q9NY30 223 aa24.76■■□□□ 1.55
C11orf49-201ENST00000278460 SLC4A2P04920 1241 aa24.75■■□□□ 1.55
C11orf49-201ENST00000278460 DCAF5Q96JK2 942 aa24.75■■□□□ 1.55
C11orf49-201ENST00000278460 STK31Q9BXU1 1019 aa24.75■■□□□ 1.55
C11orf49-201ENST00000278460 TSHZ2Q9NRE2 1034 aa24.75■■□□□ 1.55
C11orf49-201ENST00000278460 NWD2Q9ULI1 1742 aa24.75■■□□□ 1.55
C11orf49-201ENST00000278460 PCDH11XQ9BZA7 1347 aa24.75■■□□□ 1.55
C11orf49-201ENST00000278460 PCDH11YQ9BZA8 1340 aa24.75■■□□□ 1.55
C11orf49-201ENST00000278460 UBAP1LF5GYI3 381 aa24.75■■□□□ 1.55
C11orf49-201ENST00000278460 ZCRB1Q8TBF4 217 aaKnown RBP24.75■■□□□ 1.55
C11orf49-201ENST00000278460 SLC52A2Q9HAB3 445 aa24.75■■□□□ 1.55
C11orf49-201ENST00000278460 PCDHB15Q9Y5E8 787 aa24.75■■□□□ 1.55
C11orf49-201ENST00000278460 HEG1Q9ULI3 1381 aa24.74■■□□□ 1.55
C11orf49-201ENST00000278460 AEBP2Q6ZN18 517 aaPredicted RBP24.73■■□□□ 1.55
C11orf49-201ENST00000278460 ZBTB40Q9NUA8 1239 aa24.73■■□□□ 1.55
C11orf49-201ENST00000278460 KCNQ3O43525 872 aa24.72■■□□□ 1.55
C11orf49-201ENST00000278460 IGHDP01880 384 aa24.72■■□□□ 1.55
C11orf49-201ENST00000278460 INTS3Q68E01 1043 aaKnown RBP24.71■■□□□ 1.55
C11orf49-201ENST00000278460 C5P01031 1676 aa24.7■■□□□ 1.54
C11orf49-201ENST00000278460 HDGFL1Q5TGJ6 251 aa24.7■■□□□ 1.54
C11orf49-201ENST00000278460 ZBTB7BO15156 539 aaPredicted RBP24.69■■□□□ 1.54
C11orf49-201ENST00000278460 G2E3Q7L622 706 aa24.69■■□□□ 1.54
C11orf49-201ENST00000278460 RWDD1Q9H446 243 aaPredicted RBP24.68■■□□□ 1.54
C11orf49-201ENST00000278460 DISP2A7MBM2 1401 aa24.68■■□□□ 1.54
C11orf49-201ENST00000278460 NKX1-1Q15270 411 aaPredicted RBP24.68■■□□□ 1.54
C11orf49-201ENST00000278460 UBR2Q8IWV8 1755 aa24.67■■□□□ 1.54
C11orf49-201ENST00000278460 NFATC2IPQ8NCF5 419 aa24.67■■□□□ 1.54
C11orf49-201ENST00000278460 PAPPAQ13219 1627 aa24.67■■□□□ 1.54
C11orf49-201ENST00000278460 TOGARAM1Q9Y4F4 1720 aa24.66■■□□□ 1.54
C11orf49-201ENST00000278460 FLIIQ13045 1269 aa24.66■■□□□ 1.54
C11orf49-201ENST00000278460 ZNF790Q6PG37 636 aa24.66■■□□□ 1.54
C11orf49-201ENST00000278460 GIGYF1O75420 1035 aaPredicted RBP24.65■■□□□ 1.54
C11orf49-201ENST00000278460 HDAC1Q13547 482 aaPredicted RBP24.65■■□□□ 1.54
C11orf49-201ENST00000278460 NECTIN2Q92692 538 aa24.65■■□□□ 1.54
C11orf49-201ENST00000278460 LAMB4A4D0S4 1761 aa24.65■■□□□ 1.54
C11orf49-201ENST00000278460 PXDNLA1KZ92 1463 aa24.64■■□□□ 1.54
C11orf49-201ENST00000278460 ITGB4P16144 1822 aa24.64■■□□□ 1.53
C11orf49-201ENST00000278460 ERVV-2B6SEH9 535 aa24.63■■□□□ 1.53
C11orf49-201ENST00000278460 ADAMTS2O95450 1211 aa24.63■■□□□ 1.53
C11orf49-201ENST00000278460 EIF2S2P20042 333 aaKnown RBP24.63■■□□□ 1.53
C11orf49-201ENST00000278460 CABP4P57796 275 aa24.63■■□□□ 1.53
C11orf49-201ENST00000278460 CERKQ8TCT0 537 aa24.62■■□□□ 1.53
C11orf49-201ENST00000278460 USP35Q9P2H5 1018 aa24.62■■□□□ 1.53
C11orf49-201ENST00000278460 CCT4P50991 539 aaKnown RBP24.61■■□□□ 1.53
C11orf49-201ENST00000278460 GLI3P10071 1580 aa24.61■■□□□ 1.53
C11orf49-201ENST00000278460 SLIT2O94813 1529 aa24.61■■□□□ 1.53
C11orf49-201ENST00000278460 JCADQ9P266 1359 aa24.61■■□□□ 1.53
C11orf49-201ENST00000278460 SLC39A6Q13433 755 aa24.61■■□□□ 1.53
C11orf49-201ENST00000278460 FKBP5Q13451 457 aaPredicted RBP24.61■■□□□ 1.53
C11orf49-201ENST00000278460 CHPF2Q9P2E5 772 aa24.6■■□□□ 1.53
C11orf49-201ENST00000278460 LRP6O75581 1613 aa24.59■■□□□ 1.53
C11orf49-201ENST00000278460 NUTM2BA6NNL0 878 aaPredicted RBP24.59■■□□□ 1.53
C11orf49-201ENST00000278460 NUTM2EB1AL46 878 aaPredicted RBP24.59■■□□□ 1.53
C11orf49-201ENST00000278460 NUTM2AQ8IVF1 878 aaPredicted RBP24.59■■□□□ 1.53
C11orf49-201ENST00000278460 DDX54Q8TDD1 881 aaKnown RBP24.59■■□□□ 1.53
C11orf49-201ENST00000278460 DBF4Q9UBU7 674 aaPredicted RBP24.59■■□□□ 1.53
C11orf49-201ENST00000278460 TTC5Q8N0Z6 440 aa24.58■■□□□ 1.53
C11orf49-201ENST00000278460 F6X3S4 739 aa24.57■■□□□ 1.52
C11orf49-201ENST00000278460 THRAP3Q9Y2W1 955 aaKnown RBP24.57■■□□□ 1.52
C11orf49-201ENST00000278460 SPATA31A1Q5TZJ5 1347 aa24.56■■□□□ 1.52
C11orf49-201ENST00000278460 KAT6BQ8WYB5 2073 aa24.56■■□□□ 1.52
C11orf49-201ENST00000278460 ZNF496Q96IT1 587 aaPredicted RBP24.56■■□□□ 1.52
C11orf49-201ENST00000278460 CDCA7Q9BWT1 371 aaPredicted RBP24.56■■□□□ 1.52
C11orf49-201ENST00000278460 PHAXQ9H814 394 aaKnown RBP24.56■■□□□ 1.52
C11orf49-201ENST00000278460 SKAP1Q86WV1 359 aa24.55■■□□□ 1.52
C11orf49-201ENST00000278460 FMNL2Q96PY5 1086 aa24.55■■□□□ 1.52
C11orf49-201ENST00000278460 TNS2Q63HR2 1409 aa24.55■■□□□ 1.52
C11orf49-201ENST00000278460 SLC4A10Q6U841 1118 aa24.54■■□□□ 1.52
C11orf49-201ENST00000278460 PRAMEF22A3QJZ6 481 aa24.53■■□□□ 1.52
C11orf49-201ENST00000278460 SNRPA1P09661 255 aaKnown RBP24.53■■□□□ 1.52
C11orf49-201ENST00000278460 SMC5Q8IY18 1101 aa24.53■■□□□ 1.52
C11orf49-201ENST00000278460 KCPQ6ZWJ8 1503 aa24.53■■□□□ 1.52
C11orf49-201ENST00000278460 C1orf115Q9H7X2 142 aa24.53■■□□□ 1.52
C11orf49-201ENST00000278460 DDX21Q9NR30 783 aaKnown RBP eCLIP24.53■■□□□ 1.52
C11orf49-201ENST00000278460 HYPKQ9NX55 129 aa24.53■■□□□ 1.52
C11orf49-201ENST00000278460 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.52■■□□□ 1.52
C11orf49-201ENST00000278460 SPATA31A5Q5VU36 1347 aa24.52■■□□□ 1.52
C11orf49-201ENST00000278460 SPATA31A7Q8IWB4 1347 aa24.52■■□□□ 1.52
C11orf49-201ENST00000278460 PDZRN3Q9UPQ7 1066 aa24.51■■□□□ 1.51
C11orf49-201ENST00000278460 ATP10DQ9P241 1426 aa24.51■■□□□ 1.51
C11orf49-201ENST00000278460 EXOC5O00471 708 aa24.5■■□□□ 1.51
C11orf49-201ENST00000278460 MEIS3Q99687 375 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms