RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 EZRP15311 586 aaKnown RBP19.63■□□□□ 0.73
TSPAN3-201ENST00000267970 NBPF8Q3BBV2 869 aa19.63■□□□□ 0.73
TSPAN3-201ENST00000267970 TFIP11Q9UBB9 837 aaKnown RBP19.63■□□□□ 0.73
TSPAN3-201ENST00000267970 SMTNL1A8MU46 457 aa19.63■□□□□ 0.73
TSPAN3-201ENST00000267970 AAMPQ13685 434 aa19.63■□□□□ 0.73
TSPAN3-201ENST00000267970 TSHZ3Q63HK5 1081 aa19.63■□□□□ 0.73
TSPAN3-201ENST00000267970 MCM10Q7L590 875 aa19.63■□□□□ 0.73
TSPAN3-201ENST00000267970 TOM1L2Q6ZVM7 507 aa19.63■□□□□ 0.73
TSPAN3-201ENST00000267970 RNF216Q9NWF9 866 aaPredicted RBP19.63■□□□□ 0.73
TSPAN3-201ENST00000267970 PTPRGP23470 1445 aa19.62■□□□□ 0.73
TSPAN3-201ENST00000267970 SHTN1A0MZ66 631 aa19.62■□□□□ 0.73
TSPAN3-201ENST00000267970 SFPQP23246 707 aaKnown RBP eCLIP19.62■□□□□ 0.73
TSPAN3-201ENST00000267970 HSP90AA4PQ58FG1 418 aa19.62■□□□□ 0.73
TSPAN3-201ENST00000267970 IFFO1Q0D2I5 559 aa19.61■□□□□ 0.73
TSPAN3-201ENST00000267970 TATP17735 454 aaPredicted RBP19.61■□□□□ 0.73
TSPAN3-201ENST00000267970 JAKMIP3Q5VZ66 844 aa19.61■□□□□ 0.73
TSPAN3-201ENST00000267970 IQCEQ6IPM2 695 aa19.61■□□□□ 0.73
TSPAN3-201ENST00000267970 SPTY2D1Q68D10 685 aaPredicted RBP19.61■□□□□ 0.73
TSPAN3-201ENST00000267970 TERF1P54274 439 aa19.6■□□□□ 0.73
TSPAN3-201ENST00000267970 NUP88Q99567 741 aaPredicted RBP19.6■□□□□ 0.73
TSPAN3-201ENST00000267970 CCDC8Q9H0W5 538 aaPredicted RBP19.6■□□□□ 0.73
TSPAN3-201ENST00000267970 F6X3S4 739 aa19.6■□□□□ 0.73
TSPAN3-201ENST00000267970 SPA17Q15506 151 aa19.6■□□□□ 0.73
TSPAN3-201ENST00000267970 BMP2KQ9NSY1 1161 aaPredicted RBP19.6■□□□□ 0.73
TSPAN3-201ENST00000267970 PPP6R1Q9UPN7 881 aa19.6■□□□□ 0.73
TSPAN3-201ENST00000267970 TOP1P11387 765 aaKnown RBP19.59■□□□□ 0.73
TSPAN3-201ENST00000267970 PNISRQ8TF01 805 aaKnown RBP19.59■□□□□ 0.73
TSPAN3-201ENST00000267970 FAM69CQ0P6D2 419 aa19.59■□□□□ 0.73
TSPAN3-201ENST00000267970 USHBP1Q8N6Y0 703 aa19.59■□□□□ 0.73
TSPAN3-201ENST00000267970 TNPO1Q92973 898 aaKnown RBP19.59■□□□□ 0.73
TSPAN3-201ENST00000267970 PUS7Q96PZ0 661 aaKnown RBP19.59■□□□□ 0.73
TSPAN3-201ENST00000267970 TMC6Q7Z403 805 aa19.59■□□□□ 0.73
TSPAN3-201ENST00000267970 ZNF397Q8NF99 534 aaPredicted RBP19.59■□□□□ 0.73
TSPAN3-201ENST00000267970 AIDAQ96BJ3 306 aa19.59■□□□□ 0.73
TSPAN3-201ENST00000267970 LUZP1Q86V48 1076 aa19.59■□□□□ 0.73
TSPAN3-201ENST00000267970 CACNA2D4Q7Z3S7 1137 aa19.58■□□□□ 0.73
TSPAN3-201ENST00000267970 GSTTP1A0A1W2PQM5 241 aa19.58■□□□□ 0.73
TSPAN3-201ENST00000267970 KIF5CO60282 957 aa19.58■□□□□ 0.73
TSPAN3-201ENST00000267970 AFAP1Q8N556 730 aa19.58■□□□□ 0.73
TSPAN3-201ENST00000267970 IMMTQ16891 758 aaKnown RBP19.57■□□□□ 0.72
TSPAN3-201ENST00000267970 CDKL5O76039 1030 aa19.57■□□□□ 0.72
TSPAN3-201ENST00000267970 KIF18AQ8NI77 898 aa19.57■□□□□ 0.72
TSPAN3-201ENST00000267970 SPG7Q9UQ90 795 aa19.57■□□□□ 0.72
TSPAN3-201ENST00000267970 CCDC183Q5T5S1 534 aa19.57■□□□□ 0.72
TSPAN3-201ENST00000267970 TDRD12Q587J7 1177 aaKnown RBP19.57■□□□□ 0.72
TSPAN3-201ENST00000267970 CEP63Q96MT8 703 aa19.57■□□□□ 0.72
TSPAN3-201ENST00000267970 FGD6Q6ZV73 1430 aa19.56■□□□□ 0.72
TSPAN3-201ENST00000267970 LMAN1P49257 510 aa19.56■□□□□ 0.72
TSPAN3-201ENST00000267970 PRPF4BQ13523 1007 aaKnown RBP19.56■□□□□ 0.72
TSPAN3-201ENST00000267970 ZSCAN31Q96LW9 406 aaPredicted RBP19.56■□□□□ 0.72
TSPAN3-201ENST00000267970 MMRN2Q9H8L6 949 aa19.56■□□□□ 0.72
TSPAN3-201ENST00000267970 GPRASP1Q5JY77 1395 aa19.56■□□□□ 0.72
TSPAN3-201ENST00000267970 ADCY5O95622 1261 aa19.56■□□□□ 0.72
TSPAN3-201ENST00000267970 CEP126Q9P2H0 1117 aa19.55■□□□□ 0.72
TSPAN3-201ENST00000267970 MYCNP04198 464 aaPredicted RBP19.55■□□□□ 0.72
TSPAN3-201ENST00000267970 HLTFQ14527 1009 aaKnown RBP eCLIP19.55■□□□□ 0.72
TSPAN3-201ENST00000267970 ANAPC15P60006 121 aa19.55■□□□□ 0.72
TSPAN3-201ENST00000267970 PTCD1O75127 700 aaKnown RBP19.55■□□□□ 0.72
TSPAN3-201ENST00000267970 TBC1D2Q9BYX2 928 aa19.54■□□□□ 0.72
TSPAN3-201ENST00000267970 PPM1FP49593 454 aaPredicted RBP19.54■□□□□ 0.72
TSPAN3-201ENST00000267970 METTL24Q5JXM2 366 aa19.54■□□□□ 0.72
TSPAN3-201ENST00000267970 SMG6Q86US8 1419 aaKnown RBP19.54■□□□□ 0.72
TSPAN3-201ENST00000267970 POLR3DP05423 398 aaPredicted RBP19.54■□□□□ 0.72
TSPAN3-201ENST00000267970 JARID2Q92833 1246 aaPredicted RBP19.54■□□□□ 0.72
TSPAN3-201ENST00000267970 SLC26A8Q96RN1 970 aa19.54■□□□□ 0.72
TSPAN3-201ENST00000267970 CCDC96Q2M329 555 aa19.54■□□□□ 0.72
TSPAN3-201ENST00000267970 MX1P20591 662 aa19.53■□□□□ 0.72
TSPAN3-201ENST00000267970 ZMYND15Q9H091 742 aa19.53■□□□□ 0.72
TSPAN3-201ENST00000267970 ZC3H6P61129 1189 aaKnown RBP19.53■□□□□ 0.72
TSPAN3-201ENST00000267970 MYD88Q99836 296 aa19.53■□□□□ 0.72
TSPAN3-201ENST00000267970 RANBP6O60518 1105 aaKnown RBP19.53■□□□□ 0.72
TSPAN3-201ENST00000267970 TXLNBQ8N3L3 684 aa19.53■□□□□ 0.72
TSPAN3-201ENST00000267970 ANKRD50Q9ULJ7 1429 aa19.53■□□□□ 0.72
TSPAN3-201ENST00000267970 TMCO5BA8MYB1 307 aa19.53■□□□□ 0.72
TSPAN3-201ENST00000267970 DRC1Q96MC2 740 aa19.53■□□□□ 0.72
TSPAN3-201ENST00000267970 ZNF219Q9P2Y4 722 aaPredicted RBP19.53■□□□□ 0.72
TSPAN3-201ENST00000267970 ZSCAN25Q6NSZ9 544 aa19.52■□□□□ 0.72
TSPAN3-201ENST00000267970 IGSF3O75054 1194 aa19.52■□□□□ 0.72
TSPAN3-201ENST00000267970 SPECC1Q5M775 1068 aa19.52■□□□□ 0.72
TSPAN3-201ENST00000267970 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.52■□□□□ 0.72
TSPAN3-201ENST00000267970 V9GYY5 206 aaPredicted RBP19.52■□□□□ 0.72
TSPAN3-201ENST00000267970 MYOM3Q5VTT5 1437 aa19.52■□□□□ 0.72
TSPAN3-201ENST00000267970 MAATS1Q7Z4T9 603 aa19.52■□□□□ 0.72
TSPAN3-201ENST00000267970 FSIP1Q8NA03 581 aa19.52■□□□□ 0.72
TSPAN3-201ENST00000267970 CCDC91Q7Z6B0 441 aa19.52■□□□□ 0.71
TSPAN3-201ENST00000267970 PROSER2Q86WR7 435 aaPredicted RBP19.52■□□□□ 0.71
TSPAN3-201ENST00000267970 ANO10Q9NW15 660 aa19.52■□□□□ 0.71
TSPAN3-201ENST00000267970 C8orf76Q96K31 380 aa19.51■□□□□ 0.71
TSPAN3-201ENST00000267970 CTR9Q6PD62 1173 aa19.51■□□□□ 0.71
TSPAN3-201ENST00000267970 CNNM3Q8NE01 707 aa19.51■□□□□ 0.71
TSPAN3-201ENST00000267970 SCLT1Q96NL6 688 aa19.51■□□□□ 0.71
TSPAN3-201ENST00000267970 ZSCAN12O43309 604 aa19.51■□□□□ 0.71
TSPAN3-201ENST00000267970 GJB2P29033 226 aa19.5■□□□□ 0.71
TSPAN3-201ENST00000267970 VAT1LQ9HCJ6 419 aa19.5■□□□□ 0.71
TSPAN3-201ENST00000267970 SMARCA2P51531 1590 aa19.5■□□□□ 0.71
TSPAN3-201ENST00000267970 FKBP15Q5T1M5 1219 aa19.5■□□□□ 0.71
TSPAN3-201ENST00000267970 WDR63Q8IWG1 891 aa19.5■□□□□ 0.71
TSPAN3-201ENST00000267970 RAB11FIP3O75154 756 aa19.5■□□□□ 0.71
TSPAN3-201ENST00000267970 HAND2P61296 217 aa19.5■□□□□ 0.71
TSPAN3-201ENST00000267970 CTNNA3Q9UI47 895 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms