RNA–Protein interactions for RNA: ENST00000265735.11

SGCE-201, Transcript of sarcoglycan epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCE, Length 1,694 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-201ENST00000265735 MRC1P22897 1456 aa16.76■□□□□ 0.27
SGCE-201ENST00000265735 RNMTO43148 476 aaKnown RBP16.75■□□□□ 0.27
SGCE-201ENST00000265735 KCNQ4P56696 695 aa16.75■□□□□ 0.27
SGCE-201ENST00000265735 CABP4P57796 275 aa16.75■□□□□ 0.27
SGCE-201ENST00000265735 FAM9BQ8IZU0 186 aa16.75■□□□□ 0.27
SGCE-201ENST00000265735 CCNL1Q9UK58 526 aaPredicted RBP16.75■□□□□ 0.27
SGCE-201ENST00000265735 NFATC2IPQ8NCF5 419 aa16.75■□□□□ 0.27
SGCE-201ENST00000265735 STK32BQ9NY57 414 aa16.75■□□□□ 0.27
SGCE-201ENST00000265735 ZNF831Q5JPB2 1677 aa16.75■□□□□ 0.27
SGCE-201ENST00000265735 CASZ1Q86V15 1759 aa16.74■□□□□ 0.27
SGCE-201ENST00000265735 C5P01031 1676 aa16.74■□□□□ 0.27
SGCE-201ENST00000265735 AKT1S1Q96B36 256 aa16.74■□□□□ 0.27
SGCE-201ENST00000265735 PLEKHF1Q96S99 279 aa16.74■□□□□ 0.27
SGCE-201ENST00000265735 QSER1Q2KHR3 1735 aa16.74■□□□□ 0.27
SGCE-201ENST00000265735 MAP3K5Q99683 1374 aa16.74■□□□□ 0.27
SGCE-201ENST00000265735 GNAT3A8MTJ3 354 aa16.73■□□□□ 0.27
SGCE-201ENST00000265735 ZNF827Q17R98 1081 aa16.73■□□□□ 0.27
SGCE-201ENST00000265735 SLC52A2Q9HAB3 445 aa16.73■□□□□ 0.27
SGCE-201ENST00000265735 LOC102724428A0A0B4J2F2 783 aa16.72■□□□□ 0.27
SGCE-201ENST00000265735 SIK1P57059 783 aa16.72■□□□□ 0.27
SGCE-201ENST00000265735 HMGB2P26583 209 aaKnown RBP16.72■□□□□ 0.27
SGCE-201ENST00000265735 IL17REQ8NFR9 667 aa16.72■□□□□ 0.27
SGCE-201ENST00000265735 LRP5O75197 1615 aa16.71■□□□□ 0.27
SGCE-201ENST00000265735 SIPA1L3O60292 1781 aaPredicted RBP16.71■□□□□ 0.27
SGCE-201ENST00000265735 TUBGCP6Q96RT7 1819 aa16.71■□□□□ 0.27
SGCE-201ENST00000265735 CEMIPQ8WUJ3 1361 aa16.71■□□□□ 0.27
SGCE-201ENST00000265735 PDGFDQ9GZP0 370 aaPredicted RBP16.7■□□□□ 0.26
SGCE-201ENST00000265735 PNNQ9H307 717 aaKnown RBP16.7■□□□□ 0.26
SGCE-201ENST00000265735 C4BP0C0L5 1744 aa16.69■□□□□ 0.26
SGCE-201ENST00000265735 DLG5Q8TDM6 1919 aa16.69■□□□□ 0.26
SGCE-201ENST00000265735 SLC4A9Q96Q91 983 aa16.69■□□□□ 0.26
SGCE-201ENST00000265735 CICQ96RK0 1608 aaPredicted RBP16.68■□□□□ 0.26
SGCE-201ENST00000265735 HTATSF1O43719 755 aaKnown RBP16.68■□□□□ 0.26
SGCE-201ENST00000265735 ITPK1Q13572 414 aa16.68■□□□□ 0.26
SGCE-201ENST00000265735 SRCAPQ6ZRS2 3230 aa16.67■□□□□ 0.26
SGCE-201ENST00000265735 COL5A3P25940 1745 aaPredicted RBP16.67■□□□□ 0.26
SGCE-201ENST00000265735 NEFMP07197 916 aa16.67■□□□□ 0.26
SGCE-201ENST00000265735 ATP6V1AP38606 617 aa16.67■□□□□ 0.26
SGCE-201ENST00000265735 PNISRQ8TF01 805 aaKnown RBP16.67■□□□□ 0.26
SGCE-201ENST00000265735 UBR2Q8IWV8 1755 aa16.67■□□□□ 0.26
SGCE-201ENST00000265735 ZBED9Q6R2W3 1325 aa16.66■□□□□ 0.26
SGCE-201ENST00000265735 PNPLA7Q6ZV29 1317 aa16.66■□□□□ 0.26
SGCE-201ENST00000265735 LINC00116Q8NCU8 138 aa16.65■□□□□ 0.26
SGCE-201ENST00000265735 TFCP2L1Q9NZI6 479 aa16.65■□□□□ 0.26
SGCE-201ENST00000265735 UBR3Q6ZT12 1888 aa16.65■□□□□ 0.26
SGCE-201ENST00000265735 KCPQ6ZWJ8 1503 aa16.65■□□□□ 0.26
SGCE-201ENST00000265735 TEFQ10587 303 aa16.65■□□□□ 0.26
SGCE-201ENST00000265735 NFE2L2Q16236 605 aa16.65■□□□□ 0.26
SGCE-201ENST00000265735 RBM42Q9BTD8 480 aaKnown RBP16.65■□□□□ 0.26
SGCE-201ENST00000265735 ADAMTS8Q9UP79 889 aa16.65■□□□□ 0.26
SGCE-201ENST00000265735 TJP1Q07157 1748 aa16.64■□□□□ 0.25
SGCE-201ENST00000265735 PTCD1O75127 700 aaKnown RBP16.64■□□□□ 0.25
SGCE-201ENST00000265735 SLC39A6Q13433 755 aa16.64■□□□□ 0.25
SGCE-201ENST00000265735 MAPK8IP3Q9UPT6 1336 aa16.63■□□□□ 0.25
SGCE-201ENST00000265735 WDR43Q15061 677 aaKnown RBP eCLIP16.63■□□□□ 0.25
SGCE-201ENST00000265735 MCM10Q7L590 875 aa16.63■□□□□ 0.25
SGCE-201ENST00000265735 RTF1Q92541 710 aaKnown RBP16.63■□□□□ 0.25
SGCE-201ENST00000265735 COL24A1Q17RW2 1714 aa16.63■□□□□ 0.25
SGCE-201ENST00000265735 DCTN1Q14203 1278 aa16.62■□□□□ 0.25
SGCE-201ENST00000265735 SLC16A10Q8TF71 515 aa16.62■□□□□ 0.25
SGCE-201ENST00000265735 SPON1Q9HCB6 807 aa16.62■□□□□ 0.25
SGCE-201ENST00000265735 MYH14Q7Z406 1995 aaKnown RBP16.62■□□□□ 0.25
SGCE-201ENST00000265735 RC3H1Q5TC82 1133 aaKnown RBP16.62■□□□□ 0.25
SGCE-201ENST00000265735 AMIGO3Q86WK7 504 aa16.62■□□□□ 0.25
SGCE-201ENST00000265735 COL23A1Q86Y22 540 aaPredicted RBP16.62■□□□□ 0.25
SGCE-201ENST00000265735 ZBTB7AO95365 584 aa16.61■□□□□ 0.25
SGCE-201ENST00000265735 ZNF790Q6PG37 636 aa16.61■□□□□ 0.25
SGCE-201ENST00000265735 FLAD1Q8NFF5 587 aa16.61■□□□□ 0.25
SGCE-201ENST00000265735 MTFR1LQ9H019 292 aa16.61■□□□□ 0.25
SGCE-201ENST00000265735 CNTNAP4Q9C0A0 1308 aa16.61■□□□□ 0.25
SGCE-201ENST00000265735 TMPOP42166 694 aaKnown RBP16.6■□□□□ 0.25
SGCE-201ENST00000265735 VSIG10Q8N0Z9 540 aa16.6■□□□□ 0.25
SGCE-201ENST00000265735 RUNDC1Q96C34 613 aa16.6■□□□□ 0.25
SGCE-201ENST00000265735 AK7Q96M32 723 aa16.6■□□□□ 0.25
SGCE-201ENST00000265735 PTGER2P43116 358 aa16.59■□□□□ 0.25
SGCE-201ENST00000265735 CCDC146Q8IYE0 955 aa16.59■□□□□ 0.25
SGCE-201ENST00000265735 SGIP1Q9BQI5 828 aa16.59■□□□□ 0.25
SGCE-201ENST00000265735 BTBD11A6QL63 1104 aa16.59■□□□□ 0.25
SGCE-201ENST00000265735 SSFA2P28290 1259 aa16.59■□□□□ 0.25
SGCE-201ENST00000265735 RIPK4P57078 832 aa16.58■□□□□ 0.24
SGCE-201ENST00000265735 TTC5Q8N0Z6 440 aa16.58■□□□□ 0.24
SGCE-201ENST00000265735 ZNF496Q96IT1 587 aaPredicted RBP16.58■□□□□ 0.24
SGCE-201ENST00000265735 ATF5Q9Y2D1 282 aaPredicted RBP16.58■□□□□ 0.24
SGCE-201ENST00000265735 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.57■□□□□ 0.24
SGCE-201ENST00000265735 GNPATO15228 680 aa16.57■□□□□ 0.24
SGCE-201ENST00000265735 TAF7Q15545 349 aaPredicted RBP16.57■□□□□ 0.24
SGCE-201ENST00000265735 DNAJC10Q8IXB1 793 aa16.57■□□□□ 0.24
SGCE-201ENST00000265735 HEG1Q9ULI3 1381 aa16.57■□□□□ 0.24
SGCE-201ENST00000265735 KCNQ3O43525 872 aa16.56■□□□□ 0.24
SGCE-201ENST00000265735 NEFLP07196 543 aa16.56■□□□□ 0.24
SGCE-201ENST00000265735 CYP19A1P11511 503 aaPredicted RBP16.56■□□□□ 0.24
SGCE-201ENST00000265735 CRKLP46109 303 aaKnown RBP16.56■□□□□ 0.24
SGCE-201ENST00000265735 SMIM5Q71RC9 77 aa16.56■□□□□ 0.24
SGCE-201ENST00000265735 KDM3BQ7LBC6 1761 aa16.56■□□□□ 0.24
SGCE-201ENST00000265735 RPS6KA4O75676 772 aa16.56■□□□□ 0.24
SGCE-201ENST00000265735 INTS5Q6P9B9 1019 aaKnown RBP16.56■□□□□ 0.24
SGCE-201ENST00000265735 RTCBQ9Y3I0 505 aaKnown RBP16.56■□□□□ 0.24
SGCE-201ENST00000265735 FMNL2Q96PY5 1086 aa16.55■□□□□ 0.24
SGCE-201ENST00000265735 THUMPD2Q9BTF0 503 aaKnown RBP16.55■□□□□ 0.24
SGCE-201ENST00000265735 PHF14O94880 888 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms