RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 TICAM2Q86XR7 235 aa12.49□□□□□ -0.41
CPT1A-201ENST00000265641 MICALL1Q8N3F8 863 aa12.49□□□□□ -0.41
CPT1A-201ENST00000265641 TOMM22Q9NS69 142 aa12.49□□□□□ -0.41
CPT1A-201ENST00000265641 GPRASP1Q5JY77 1395 aa12.49□□□□□ -0.41
CPT1A-201ENST00000265641 CAPN2P17655 700 aa12.49□□□□□ -0.41
CPT1A-201ENST00000265641 STX1AQ16623 288 aa12.49□□□□□ -0.41
CPT1A-201ENST00000265641 IMMTQ16891 758 aaKnown RBP12.49□□□□□ -0.41
CPT1A-201ENST00000265641 TWISTNBQ3B726 338 aaPredicted RBP12.49□□□□□ -0.41
CPT1A-201ENST00000265641 RNF187Q5TA31 235 aaPredicted RBP12.49□□□□□ -0.41
CPT1A-201ENST00000265641 FMNL2Q96PY5 1086 aa12.49□□□□□ -0.41
CPT1A-201ENST00000265641 G3BP1Q13283 466 aaKnown RBP eCLIP12.49□□□□□ -0.41
CPT1A-201ENST00000265641 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.49□□□□□ -0.41
CPT1A-201ENST00000265641 RSPH14Q9UHP6 348 aa12.49□□□□□ -0.41
CPT1A-201ENST00000265641 ANKRD30BQ9BXX2 1392 aa12.49□□□□□ -0.41
CPT1A-201ENST00000265641 FAM200AQ8TCP9 573 aa12.49□□□□□ -0.41
CPT1A-201ENST00000265641 RPAP2Q8IXW5 612 aaPredicted RBP12.48□□□□□ -0.41
CPT1A-201ENST00000265641 UBTFL1P0CB47 393 aaPredicted RBP12.48□□□□□ -0.41
CPT1A-201ENST00000265641 CTCFLQ8NI51 663 aaPredicted RBP12.48□□□□□ -0.41
CPT1A-201ENST00000265641 GGNBP2Q9H3C7 697 aa12.48□□□□□ -0.41
CPT1A-201ENST00000265641 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.48□□□□□ -0.41
CPT1A-201ENST00000265641 IGHDP01880 384 aa12.48□□□□□ -0.41
CPT1A-201ENST00000265641 SPECC1LQ69YQ0 1117 aa12.48□□□□□ -0.41
CPT1A-201ENST00000265641 HMOX1P09601 288 aa12.48□□□□□ -0.41
CPT1A-201ENST00000265641 MX1P20591 662 aa12.48□□□□□ -0.41
CPT1A-201ENST00000265641 ATP6V1AP38606 617 aa12.48□□□□□ -0.41
CPT1A-201ENST00000265641 SKIDA1Q1XH10 827 aa12.48□□□□□ -0.41
CPT1A-201ENST00000265641 CEP112Q8N8E3 955 aa12.48□□□□□ -0.41
CPT1A-201ENST00000265641 MAPKBP1O60336 1514 aa12.48□□□□□ -0.41
CPT1A-201ENST00000265641 ANKRD18AQ8IVF6 992 aa12.47□□□□□ -0.41
CPT1A-201ENST00000265641 TMEM57Q8N5G2 664 aa12.47□□□□□ -0.41
CPT1A-201ENST00000265641 XBP1P17861 261 aa12.47□□□□□ -0.41
CPT1A-201ENST00000265641 KIF4BQ2VIQ3 1234 aa12.47□□□□□ -0.41
CPT1A-201ENST00000265641 CLASRPQ8N2M8 674 aaKnown RBP12.47□□□□□ -0.41
CPT1A-201ENST00000265641 OPA1O60313 960 aa12.47□□□□□ -0.41
CPT1A-201ENST00000265641 MAP2K2P36507 400 aa12.47□□□□□ -0.41
CPT1A-201ENST00000265641 TXLNAP40222 546 aa12.47□□□□□ -0.41
CPT1A-201ENST00000265641 KRT32Q14532 448 aa12.47□□□□□ -0.41
CPT1A-201ENST00000265641 TUBB2AQ13885 445 aa12.47□□□□□ -0.41
CPT1A-201ENST00000265641 KRBA2Q6ZNG9 492 aa12.47□□□□□ -0.41
CPT1A-201ENST00000265641 TUBB2BQ9BVA1 445 aa12.47□□□□□ -0.41
CPT1A-201ENST00000265641 MINK1Q8N4C8 1332 aaPredicted RBP12.47□□□□□ -0.41
CPT1A-201ENST00000265641 TCOF1Q13428 1488 aaKnown RBP12.47□□□□□ -0.41
CPT1A-201ENST00000265641 PRG4Q92954 1404 aaPredicted RBP12.46□□□□□ -0.41
CPT1A-201ENST00000265641 TOP1P11387 765 aaKnown RBP12.46□□□□□ -0.41
CPT1A-201ENST00000265641 SYCP1Q15431 976 aa12.46□□□□□ -0.41
CPT1A-201ENST00000265641 SAMD9Q5K651 1589 aa12.46□□□□□ -0.41
CPT1A-201ENST00000265641 FOSBP53539 338 aa12.46□□□□□ -0.41
CPT1A-201ENST00000265641 KLHL34Q8N239 644 aa12.46□□□□□ -0.41
CPT1A-201ENST00000265641 TSPYL4Q9UJ04 414 aa12.46□□□□□ -0.41
CPT1A-201ENST00000265641 ME1P48163 572 aa12.46□□□□□ -0.41
CPT1A-201ENST00000265641 B4GALNT4Q76KP1 1039 aa12.46□□□□□ -0.41
CPT1A-201ENST00000265641 GOLGA1Q92805 767 aa12.46□□□□□ -0.41
CPT1A-201ENST00000265641 CDK13Q14004 1512 aaKnown RBP12.46□□□□□ -0.42
CPT1A-201ENST00000265641 CKAP4Q07065 602 aaKnown RBP12.46□□□□□ -0.42
CPT1A-201ENST00000265641 NUTM1Q86Y26 1132 aa12.46□□□□□ -0.42
CPT1A-201ENST00000265641 SURF6O75683 361 aaKnown RBP12.45□□□□□ -0.42
CPT1A-201ENST00000265641 GNAI2P04899 355 aa12.45□□□□□ -0.42
CPT1A-201ENST00000265641 KIF14Q15058 1648 aa12.45□□□□□ -0.42
CPT1A-201ENST00000265641 TMCO5BA8MYB1 307 aa12.45□□□□□ -0.42
CPT1A-201ENST00000265641 EHBP1Q8NDI1 1231 aa12.45□□□□□ -0.42
CPT1A-201ENST00000265641 RNF123Q5XPI4 1314 aa12.45□□□□□ -0.42
CPT1A-201ENST00000265641 CFAP100Q494V2 611 aa12.45□□□□□ -0.42
CPT1A-201ENST00000265641 PRKAR2BP31323 418 aa12.45□□□□□ -0.42
CPT1A-201ENST00000265641 HOMEZQ8IX15 550 aa12.45□□□□□ -0.42
CPT1A-201ENST00000265641 FAM177A1Q8N128 213 aaPredicted RBP12.45□□□□□ -0.42
CPT1A-201ENST00000265641 WDR66Q8TBY9 1149 aa12.45□□□□□ -0.42
CPT1A-201ENST00000265641 PDRG1Q9NUG6 133 aa12.45□□□□□ -0.42
CPT1A-201ENST00000265641 PBRM1Q86U86 1689 aa12.44□□□□□ -0.42
CPT1A-201ENST00000265641 RAPGEF6Q8TEU7 1601 aa12.44□□□□□ -0.42
CPT1A-201ENST00000265641 WDR62O43379 1518 aa12.44□□□□□ -0.42
CPT1A-201ENST00000265641 CCDC175P0C221 793 aa12.44□□□□□ -0.42
CPT1A-201ENST00000265641 STIM1Q13586 685 aa12.44□□□□□ -0.42
CPT1A-201ENST00000265641 SMC1AQ14683 1233 aaKnown RBP12.44□□□□□ -0.42
CPT1A-201ENST00000265641 FSD2A1L4K1 749 aa12.44□□□□□ -0.42
CPT1A-201ENST00000265641 VGLL3A8MV65 326 aa12.44□□□□□ -0.42
CPT1A-201ENST00000265641 EIF2S2P20042 333 aaKnown RBP12.44□□□□□ -0.42
CPT1A-201ENST00000265641 MAP2K1Q02750 393 aaPredicted RBP12.44□□□□□ -0.42
CPT1A-201ENST00000265641 OTUD6BQ8N6M0 293 aa12.44□□□□□ -0.42
CPT1A-201ENST00000265641 ITSN2Q9NZM3 1697 aa12.44□□□□□ -0.42
CPT1A-201ENST00000265641 PRIM1P49642 420 aaKnown RBP12.44□□□□□ -0.42
CPT1A-201ENST00000265641 TEFQ10587 303 aa12.44□□□□□ -0.42
CPT1A-201ENST00000265641 NAA15Q9BXJ9 866 aaKnown RBP12.44□□□□□ -0.42
CPT1A-201ENST00000265641 CLSTN1O94985 981 aa12.44□□□□□ -0.42
CPT1A-201ENST00000265641 SH3BGRP55822 239 aaPredicted RBP12.44□□□□□ -0.42
CPT1A-201ENST00000265641 ABCC11Q96J66 1382 aa12.43□□□□□ -0.42
CPT1A-201ENST00000265641 ALDH1L2Q3SY69 923 aa12.43□□□□□ -0.42
CPT1A-201ENST00000265641 HDXQ7Z353 690 aa12.43□□□□□ -0.42
CPT1A-201ENST00000265641 NGDNQ8NEJ9 315 aaKnown RBP12.43□□□□□ -0.42
CPT1A-201ENST00000265641 NECTIN2Q92692 538 aa12.43□□□□□ -0.42
CPT1A-201ENST00000265641 KDM4AO75164 1064 aa12.43□□□□□ -0.42
CPT1A-201ENST00000265641 CCT4P50991 539 aaKnown RBP12.43□□□□□ -0.42
CPT1A-201ENST00000265641 EIF5P55010 431 aaKnown RBP12.43□□□□□ -0.42
CPT1A-201ENST00000265641 HDAC1Q13547 482 aaPredicted RBP12.43□□□□□ -0.42
CPT1A-201ENST00000265641 LRCH2Q5VUJ6 765 aa12.43□□□□□ -0.42
CPT1A-201ENST00000265641 RALYLQ86SE5 291 aaKnown RBP12.43□□□□□ -0.42
CPT1A-201ENST00000265641 C9orf84Q5VXU9 1444 aa12.43□□□□□ -0.42
CPT1A-201ENST00000265641 ZNF165P49910 485 aa12.43□□□□□ -0.42
CPT1A-201ENST00000265641 SPATA24Q86W54 205 aa12.43□□□□□ -0.42
CPT1A-201ENST00000265641 CCDC9Q9Y3X0 531 aaKnown RBP12.43□□□□□ -0.42
CPT1A-201ENST00000265641 SKILP12757 684 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms