RNA–Protein interactions for RNA: ENST00000264107.11

ITGA6-201, Transcript of integrin subunit alpha 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA6, Length 5,618 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-201ENST00000264107 MAATS1Q7Z4T9 603 aa20.94■□□□□ 0.94
ITGA6-201ENST00000264107 ATRIPQ8WXE1 791 aa20.94■□□□□ 0.94
ITGA6-201ENST00000264107 SPA17Q15506 151 aa20.94■□□□□ 0.94
ITGA6-201ENST00000264107 CCDC121Q6ZUS5 278 aa20.94■□□□□ 0.94
ITGA6-201ENST00000264107 HYPKQ9NX55 129 aa20.94■□□□□ 0.94
ITGA6-201ENST00000264107 HSF2BPO75031 334 aa20.93■□□□□ 0.94
ITGA6-201ENST00000264107 CAVIN2O95810 425 aa20.93■□□□□ 0.94
ITGA6-201ENST00000264107 SPECC1Q5M775 1068 aa20.93■□□□□ 0.94
ITGA6-201ENST00000264107 NUP133Q8WUM0 1156 aa20.93■□□□□ 0.94
ITGA6-201ENST00000264107 NEUROD6Q96NK8 337 aa20.93■□□□□ 0.94
ITGA6-201ENST00000264107 CLNS1AP54105 237 aaKnown RBP20.93■□□□□ 0.94
ITGA6-201ENST00000264107 TWISTNBQ3B726 338 aaPredicted RBP20.93■□□□□ 0.94
ITGA6-201ENST00000264107 TANGO6Q9C0B7 1094 aa20.93■□□□□ 0.94
ITGA6-201ENST00000264107 SRCIN1Q9C0H9 1055 aa20.93■□□□□ 0.94
ITGA6-201ENST00000264107 PHACTR2O75167 634 aa20.92■□□□□ 0.94
ITGA6-201ENST00000264107 NUTM2DQ5VT03 806 aaPredicted RBP20.92■□□□□ 0.94
ITGA6-201ENST00000264107 MPHOSPH10O00566 681 aaKnown RBP20.92■□□□□ 0.94
ITGA6-201ENST00000264107 TUBB4AP04350 444 aa20.92■□□□□ 0.94
ITGA6-201ENST00000264107 SPATA24Q86W54 205 aa20.91■□□□□ 0.94
ITGA6-201ENST00000264107 FAM200AQ8TCP9 573 aa20.91■□□□□ 0.94
ITGA6-201ENST00000264107 CPLX3Q8WVH0 158 aa20.91■□□□□ 0.94
ITGA6-201ENST00000264107 CCDC114Q96M63 670 aa20.91■□□□□ 0.94
ITGA6-201ENST00000264107 TEFQ10587 303 aa20.91■□□□□ 0.94
ITGA6-201ENST00000264107 RAB3GAP1Q15042 981 aa20.91■□□□□ 0.94
ITGA6-201ENST00000264107 CSB-PGBD3P0DP91 1061 aa20.91■□□□□ 0.94
ITGA6-201ENST00000264107 PTGS1P23219 599 aa20.91■□□□□ 0.94
ITGA6-201ENST00000264107 TMEM57Q8N5G2 664 aa20.91■□□□□ 0.94
ITGA6-201ENST00000264107 GOLGA1Q92805 767 aa20.91■□□□□ 0.94
ITGA6-201ENST00000264107 DDX58O95786 925 aaKnown RBP20.91■□□□□ 0.94
ITGA6-201ENST00000264107 NBPF8Q3BBV2 869 aa20.91■□□□□ 0.94
ITGA6-201ENST00000264107 LRCH2Q5VUJ6 765 aa20.91■□□□□ 0.94
ITGA6-201ENST00000264107 ERO1AQ96HE7 468 aa20.91■□□□□ 0.94
ITGA6-201ENST00000264107 IGHDP01880 384 aa20.9■□□□□ 0.94
ITGA6-201ENST00000264107 MX1P20591 662 aa20.9■□□□□ 0.94
ITGA6-201ENST00000264107 CTAGE15A4D2H0 777 aa20.9■□□□□ 0.94
ITGA6-201ENST00000264107 GCOM1H8Y6P7 765 aaPredicted RBP20.9■□□□□ 0.94
ITGA6-201ENST00000264107 MYZAPP0CAP1 466 aa20.9■□□□□ 0.94
ITGA6-201ENST00000264107 CTAGE8P0CG41 777 aa20.9■□□□□ 0.94
ITGA6-201ENST00000264107 CWC27Q6UX04 472 aaKnown RBP20.9■□□□□ 0.94
ITGA6-201ENST00000264107 CTAGE6Q86UF2 777 aa20.9■□□□□ 0.94
ITGA6-201ENST00000264107 CTAGE4Q8IX94 777 aa20.9■□□□□ 0.94
ITGA6-201ENST00000264107 CEP112Q8N8E3 955 aa20.9■□□□□ 0.94
ITGA6-201ENST00000264107 HLTFQ14527 1009 aaKnown RBP eCLIP20.89■□□□□ 0.94
ITGA6-201ENST00000264107 SYCP1Q15431 976 aa20.89■□□□□ 0.94
ITGA6-201ENST00000264107 WDR66Q8TBY9 1149 aa20.89■□□□□ 0.94
ITGA6-201ENST00000264107 RNF216Q9NWF9 866 aaPredicted RBP20.89■□□□□ 0.94
ITGA6-201ENST00000264107 NEBLO76041 1014 aa20.89■□□□□ 0.93
ITGA6-201ENST00000264107 STX6O43752 255 aa20.89■□□□□ 0.93
ITGA6-201ENST00000264107 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.89■□□□□ 0.93
ITGA6-201ENST00000264107 FGD5Q6ZNL6 1462 aa20.88■□□□□ 0.93
ITGA6-201ENST00000264107 KIF5BP33176 963 aa20.88■□□□□ 0.93
ITGA6-201ENST00000264107 ZBTB9Q96C00 473 aa20.88■□□□□ 0.93
ITGA6-201ENST00000264107 CEP83Q9Y592 693 aa20.88■□□□□ 0.93
ITGA6-201ENST00000264107 ATP6V1AP38606 617 aa20.88■□□□□ 0.93
ITGA6-201ENST00000264107 PIBF1Q8WXW3 757 aa20.88■□□□□ 0.93
ITGA6-201ENST00000264107 RBSNQ9H1K0 784 aa20.88■□□□□ 0.93
ITGA6-201ENST00000264107 GOPCQ9HD26 462 aa20.88■□□□□ 0.93
ITGA6-201ENST00000264107 ANO6Q4KMQ2 910 aa20.88■□□□□ 0.93
ITGA6-201ENST00000264107 GOLIM4O00461 696 aa20.87■□□□□ 0.93
ITGA6-201ENST00000264107 TBC1D9Q6ZT07 1266 aa20.87■□□□□ 0.93
ITGA6-201ENST00000264107 SH2B1Q9NRF2 756 aaPredicted RBP20.87■□□□□ 0.93
ITGA6-201ENST00000264107 OPA1O60313 960 aa20.87■□□□□ 0.93
ITGA6-201ENST00000264107 CEP63Q96MT8 703 aa20.87■□□□□ 0.93
ITGA6-201ENST00000264107 SART3Q15020 963 aaKnown RBP20.87■□□□□ 0.93
ITGA6-201ENST00000264107 CCDC6Q16204 474 aa20.87■□□□□ 0.93
ITGA6-201ENST00000264107 NAA15Q9BXJ9 866 aaKnown RBP20.87■□□□□ 0.93
ITGA6-201ENST00000264107 LRPPRCP42704 1394 aaKnown RBP20.86■□□□□ 0.93
ITGA6-201ENST00000264107 SNX21Q969T3 373 aa20.86■□□□□ 0.93
ITGA6-201ENST00000264107 BCL2L12Q9HB09 334 aa20.86■□□□□ 0.93
ITGA6-201ENST00000264107 PTPRGP23470 1445 aa20.86■□□□□ 0.93
ITGA6-201ENST00000264107 ARID4AP29374 1257 aaPredicted RBP20.86■□□□□ 0.93
ITGA6-201ENST00000264107 NUP88Q99567 741 aaPredicted RBP20.86■□□□□ 0.93
ITGA6-201ENST00000264107 SETSIPP0DME0 302 aa20.85■□□□□ 0.93
ITGA6-201ENST00000264107 BRD2P25440 801 aaKnown RBP20.85■□□□□ 0.93
ITGA6-201ENST00000264107 USP48Q86UV5 1035 aa20.85■□□□□ 0.93
ITGA6-201ENST00000264107 CDK5RAP3Q96JB5 506 aa20.85■□□□□ 0.93
ITGA6-201ENST00000264107 LIMCH1Q9UPQ0 1083 aa20.85■□□□□ 0.93
ITGA6-201ENST00000264107 TFIP11Q9UBB9 837 aaKnown RBP20.85■□□□□ 0.93
ITGA6-201ENST00000264107 UBE4AQ14139 1066 aa20.85■□□□□ 0.93
ITGA6-201ENST00000264107 CCDC178Q5BJE1 867 aa20.85■□□□□ 0.93
ITGA6-201ENST00000264107 SYT10Q6XYQ8 523 aa20.85■□□□□ 0.93
ITGA6-201ENST00000264107 AMOTL1Q8IY63 956 aa20.85■□□□□ 0.93
ITGA6-201ENST00000264107 FBF1Q8TES7 1133 aa20.85■□□□□ 0.93
ITGA6-201ENST00000264107 USO1O60763 962 aaKnown RBP20.84■□□□□ 0.93
ITGA6-201ENST00000264107 DNA2P51530 1060 aa20.84■□□□□ 0.93
ITGA6-201ENST00000264107 FMNL3Q8IVF7 1028 aa20.84■□□□□ 0.93
ITGA6-201ENST00000264107 KLHL10Q6JEL2 608 aa20.84■□□□□ 0.93
ITGA6-201ENST00000264107 POTEDQ86YR6 584 aa20.84■□□□□ 0.93
ITGA6-201ENST00000264107 TSC1Q92574 1164 aa20.84■□□□□ 0.93
ITGA6-201ENST00000264107 YEATS4O95619 227 aa20.84■□□□□ 0.93
ITGA6-201ENST00000264107 FSIP1Q8NA03 581 aa20.84■□□□□ 0.93
ITGA6-201ENST00000264107 BIN1O00499 593 aa20.84■□□□□ 0.93
ITGA6-201ENST00000264107 SSBP05455 408 aaKnown RBP eCLIP20.84■□□□□ 0.93
ITGA6-201ENST00000264107 RPAINQ86UA6 219 aa20.84■□□□□ 0.93
ITGA6-201ENST00000264107 INPP5BP32019 993 aa20.84■□□□□ 0.93
ITGA6-201ENST00000264107 HDXQ7Z353 690 aa20.84■□□□□ 0.93
ITGA6-201ENST00000264107 RRBP1Q9P2E9 1410 aaKnown RBP20.83■□□□□ 0.93
ITGA6-201ENST00000264107 BMP2KLQ5H9B9 411 aa20.83■□□□□ 0.93
ITGA6-201ENST00000264107 SMC5Q8IY18 1101 aa20.83■□□□□ 0.93
ITGA6-201ENST00000264107 MATR3P43243 847 aaKnown RBP eCLIP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms