RNA–Protein interactions for RNA: ENST00000264025.7

NECTIN1-201, Transcript of nectin cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-201ENST00000264025 MIS18AQ9NYP9 233 aa22.61■■□□□ 1.21
NECTIN1-201ENST00000264025 CCDC83Q8IWF9 413 aa22.61■■□□□ 1.21
NECTIN1-201ENST00000264025 ALDH1L2Q3SY69 923 aa22.6■■□□□ 1.21
NECTIN1-201ENST00000264025 MCM10Q7L590 875 aa22.6■■□□□ 1.21
NECTIN1-201ENST00000264025 PRPF40BQ6NWY9 871 aaKnown RBP22.6■■□□□ 1.21
NECTIN1-201ENST00000264025 CCDC184Q52MB2 194 aa22.6■■□□□ 1.21
NECTIN1-201ENST00000264025 HMGB2P26583 209 aaKnown RBP22.6■■□□□ 1.21
NECTIN1-201ENST00000264025 ZNF397Q8NF99 534 aaPredicted RBP22.6■■□□□ 1.21
NECTIN1-201ENST00000264025 ZNF652Q9Y2D9 606 aa22.6■■□□□ 1.21
NECTIN1-201ENST00000264025 MATR3P43243 847 aaKnown RBP eCLIP22.6■■□□□ 1.21
NECTIN1-201ENST00000264025 JAKMIP3Q5VZ66 844 aa22.59■■□□□ 1.21
NECTIN1-201ENST00000264025 ABCC11Q96J66 1382 aa22.59■■□□□ 1.21
NECTIN1-201ENST00000264025 IFIT1P09914 478 aaKnown RBP22.59■■□□□ 1.21
NECTIN1-201ENST00000264025 SEC63Q9UGP8 760 aaKnown RBP22.59■■□□□ 1.21
NECTIN1-201ENST00000264025 MRC2Q9UBG0 1479 aa22.59■■□□□ 1.21
NECTIN1-201ENST00000264025 SYCE3A1L190 88 aa22.58■■□□□ 1.21
NECTIN1-201ENST00000264025 FERMT3Q86UX7 667 aa22.58■■□□□ 1.21
NECTIN1-201ENST00000264025 THUMPD2Q9BTF0 503 aaKnown RBP22.58■■□□□ 1.21
NECTIN1-201ENST00000264025 PPP1R12BO60237 982 aaPredicted RBP22.58■■□□□ 1.21
NECTIN1-201ENST00000264025 FAM193AP78312 1265 aa22.58■■□□□ 1.21
NECTIN1-201ENST00000264025 ESPNB1AK53 854 aa22.58■■□□□ 1.21
NECTIN1-201ENST00000264025 CAVIN4Q5BKX8 364 aa22.58■■□□□ 1.2
NECTIN1-201ENST00000264025 POLA1P09884 1462 aaPredicted RBP22.57■■□□□ 1.2
NECTIN1-201ENST00000264025 CCDC196A0A1B0GTZ2 297 aa22.57■■□□□ 1.2
NECTIN1-201ENST00000264025 EZRP15311 586 aaKnown RBP22.57■■□□□ 1.2
NECTIN1-201ENST00000264025 TIAM1Q13009 1591 aa22.57■■□□□ 1.2
NECTIN1-201ENST00000264025 CCDC148Q8NFR7 591 aa22.57■■□□□ 1.2
NECTIN1-201ENST00000264025 SYNJ1O43426 1573 aa22.57■■□□□ 1.2
NECTIN1-201ENST00000264025 CAMK4Q16566 473 aa22.57■■□□□ 1.2
NECTIN1-201ENST00000264025 SH2B1Q9NRF2 756 aaPredicted RBP22.57■■□□□ 1.2
NECTIN1-201ENST00000264025 SUPT6HQ7KZ85 1726 aaKnown RBP22.57■■□□□ 1.2
NECTIN1-201ENST00000264025 SCAND2PQ9GZW5 306 aaPredicted RBP22.56■■□□□ 1.2
NECTIN1-201ENST00000264025 TAF7Q15545 349 aaPredicted RBP22.56■■□□□ 1.2
NECTIN1-201ENST00000264025 TMOD3Q9NYL9 352 aa22.56■■□□□ 1.2
NECTIN1-201ENST00000264025 SMARCA5O60264 1052 aaPredicted RBP22.56■■□□□ 1.2
NECTIN1-201ENST00000264025 MYD88Q99836 296 aa22.56■■□□□ 1.2
NECTIN1-201ENST00000264025 BOLA2Q9H3K6 86 aa22.56■■□□□ 1.2
NECTIN1-201ENST00000264025 IL27Q8NEV9 243 aa22.56■■□□□ 1.2
NECTIN1-201ENST00000264025 NAPBQ9H115 298 aa22.55■■□□□ 1.2
NECTIN1-201ENST00000264025 POLR3DP05423 398 aaPredicted RBP22.55■■□□□ 1.2
NECTIN1-201ENST00000264025 UBXN4Q92575 508 aa22.55■■□□□ 1.2
NECTIN1-201ENST00000264025 ANO10Q9NW15 660 aa22.55■■□□□ 1.2
NECTIN1-201ENST00000264025 MINDY4BA8MYZ0 360 aa22.55■■□□□ 1.2
NECTIN1-201ENST00000264025 KIF2AO00139 706 aaPredicted RBP22.55■■□□□ 1.2
NECTIN1-201ENST00000264025 POTEJP0CG39 1038 aa22.55■■□□□ 1.2
NECTIN1-201ENST00000264025 AMOTQ4VCS5 1084 aa22.55■■□□□ 1.2
NECTIN1-201ENST00000264025 SSH1Q8WYL5 1049 aa22.55■■□□□ 1.2
NECTIN1-201ENST00000264025 PTCD1O75127 700 aaKnown RBP22.55■■□□□ 1.2
NECTIN1-201ENST00000264025 HMGB1P09429 215 aaKnown RBP22.55■■□□□ 1.2
NECTIN1-201ENST00000264025 GBP2P32456 591 aaPredicted RBP22.55■■□□□ 1.2
NECTIN1-201ENST00000264025 PLCD4Q9BRC7 762 aa22.55■■□□□ 1.2
NECTIN1-201ENST00000264025 SFPQP23246 707 aaKnown RBP eCLIP22.54■■□□□ 1.2
NECTIN1-201ENST00000264025 RARSP54136 660 aaKnown RBP22.54■■□□□ 1.2
NECTIN1-201ENST00000264025 TNIP1Q15025 636 aa22.54■■□□□ 1.2
NECTIN1-201ENST00000264025 CCDC102AQ96A19 550 aa22.54■■□□□ 1.2
NECTIN1-201ENST00000264025 MKNK2Q9HBH9 465 aa22.54■■□□□ 1.2
NECTIN1-201ENST00000264025 PHAXQ9H814 394 aaKnown RBP22.53■■□□□ 1.2
NECTIN1-201ENST00000264025 PLEKHH1Q9ULM0 1364 aa22.53■■□□□ 1.2
NECTIN1-201ENST00000264025 SPA17Q15506 151 aa22.53■■□□□ 1.2
NECTIN1-201ENST00000264025 CCDC141Q6ZP82 1450 aa22.53■■□□□ 1.2
NECTIN1-201ENST00000264025 SSR1P43307 286 aaKnown RBP22.53■■□□□ 1.2
NECTIN1-201ENST00000264025 CCDC183Q5T5S1 534 aa22.53■■□□□ 1.2
NECTIN1-201ENST00000264025 C8orf76Q96K31 380 aa22.53■■□□□ 1.2
NECTIN1-201ENST00000264025 NEBLO76041 1014 aa22.52■■□□□ 1.2
NECTIN1-201ENST00000264025 MAP3K12Q12852 859 aa22.52■■□□□ 1.2
NECTIN1-201ENST00000264025 CTCFLQ8NI51 663 aaPredicted RBP22.52■■□□□ 1.2
NECTIN1-201ENST00000264025 ZSCAN12O43309 604 aa22.52■■□□□ 1.2
NECTIN1-201ENST00000264025 CETN2P41208 172 aa22.52■■□□□ 1.2
NECTIN1-201ENST00000264025 FKBP15Q5T1M5 1219 aa22.52■■□□□ 1.2
NECTIN1-201ENST00000264025 CRACR2BQ8N4Y2 399 aaPredicted RBP22.52■■□□□ 1.2
NECTIN1-201ENST00000264025 ZSCAN30Q86W11 494 aa22.51■■□□□ 1.19
NECTIN1-201ENST00000264025 GBP3Q9H0R5 595 aa22.51■■□□□ 1.19
NECTIN1-201ENST00000264025 IFIT5Q13325 482 aaKnown RBP22.51■■□□□ 1.19
NECTIN1-201ENST00000264025 TSG101Q99816 390 aa22.51■■□□□ 1.19
NECTIN1-201ENST00000264025 TRIM21P19474 475 aaKnown RBP22.51■■□□□ 1.19
NECTIN1-201ENST00000264025 PRXQ9BXM0 1461 aa22.51■■□□□ 1.19
NECTIN1-201ENST00000264025 WDR97A6NE52 1622 aa22.51■■□□□ 1.19
NECTIN1-201ENST00000264025 HSP90AB3PQ58FF7 597 aa22.51■■□□□ 1.19
NECTIN1-201ENST00000264025 NKTRP30414 1462 aaKnown RBP22.5■■□□□ 1.19
NECTIN1-201ENST00000264025 ZPR1O75312 459 aa22.5■■□□□ 1.19
NECTIN1-201ENST00000264025 SNAPC4Q5SXM2 1469 aa22.5■■□□□ 1.19
NECTIN1-201ENST00000264025 WAPLQ7Z5K2 1190 aa22.5■■□□□ 1.19
NECTIN1-201ENST00000264025 DZIP1Q86YF9 867 aaKnown RBP22.5■■□□□ 1.19
NECTIN1-201ENST00000264025 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.49■■□□□ 1.19
NECTIN1-201ENST00000264025 DNAAF4Q8WXU2 420 aa22.49■■□□□ 1.19
NECTIN1-201ENST00000264025 IQCA1Q86XH1 822 aa22.49■■□□□ 1.19
NECTIN1-201ENST00000264025 PTPN14Q15678 1187 aa22.49■■□□□ 1.19
NECTIN1-201ENST00000264025 SLC5A1P13866 664 aa22.48■■□□□ 1.19
NECTIN1-201ENST00000264025 PIP4K2BP78356 416 aa22.48■■□□□ 1.19
NECTIN1-201ENST00000264025 KLHL10Q6JEL2 608 aa22.48■■□□□ 1.19
NECTIN1-201ENST00000264025 RAB34Q9BZG1 259 aa22.48■■□□□ 1.19
NECTIN1-201ENST00000264025 SLC12A7Q9Y666 1083 aa22.48■■□□□ 1.19
NECTIN1-201ENST00000264025 ZNF213O14771 459 aa22.48■■□□□ 1.19
NECTIN1-201ENST00000264025 CRACR2AQ9BSW2 395 aa22.48■■□□□ 1.19
NECTIN1-201ENST00000264025 RNF41Q9H4P4 317 aaPredicted RBP22.48■■□□□ 1.19
NECTIN1-201ENST00000264025 PDCL2Q8N4E4 241 aa22.47■■□□□ 1.19
NECTIN1-201ENST00000264025 CCDC8Q9H0W5 538 aaPredicted RBP22.47■■□□□ 1.19
NECTIN1-201ENST00000264025 TMCO3Q6UWJ1 677 aa22.47■■□□□ 1.19
NECTIN1-201ENST00000264025 CACNA2D4Q7Z3S7 1137 aa22.47■■□□□ 1.19
NECTIN1-201ENST00000264025 LIMCH1Q9UPQ0 1083 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms