RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 PDE1AP54750 535 aa18.1■□□□□ 0.49
XRCC1-201ENST00000262887 FAM69CQ0P6D2 419 aa18.1■□□□□ 0.49
XRCC1-201ENST00000262887 USP48Q86UV5 1035 aa18.1■□□□□ 0.49
XRCC1-201ENST00000262887 BCL2L12Q9HB09 334 aa18.1■□□□□ 0.49
XRCC1-201ENST00000262887 RGS12O14924 1447 aa18.1■□□□□ 0.49
XRCC1-201ENST00000262887 LETM1O95202 739 aaPredicted RBP18.09■□□□□ 0.49
XRCC1-201ENST00000262887 IPO4Q8TEX9 1081 aaKnown RBP18.09■□□□□ 0.49
XRCC1-201ENST00000262887 OSBPL3Q9H4L5 887 aa18.09■□□□□ 0.49
XRCC1-201ENST00000262887 HMMRO75330 724 aa18.09■□□□□ 0.49
XRCC1-201ENST00000262887 PALD1Q9ULE6 856 aa18.09■□□□□ 0.49
XRCC1-201ENST00000262887 HAP1P54257 671 aaPredicted RBP18.08■□□□□ 0.49
XRCC1-201ENST00000262887 KRT24Q2M2I5 525 aa18.08■□□□□ 0.49
XRCC1-201ENST00000262887 TAF7LQ5H9L4 462 aa18.08■□□□□ 0.49
XRCC1-201ENST00000262887 ESYT1Q9BSJ8 1104 aa18.08■□□□□ 0.49
XRCC1-201ENST00000262887 CCDC183Q5T5S1 534 aa18.08■□□□□ 0.48
XRCC1-201ENST00000262887 PDCL2Q8N4E4 241 aa18.08■□□□□ 0.48
XRCC1-201ENST00000262887 TMEM51Q9NW97 253 aa18.08■□□□□ 0.48
XRCC1-201ENST00000262887 SIGLEC1Q9BZZ2 1709 aa18.07■□□□□ 0.48
XRCC1-201ENST00000262887 TSPOAP1O95153 1857 aa18.07■□□□□ 0.48
XRCC1-201ENST00000262887 ANO2Q9NQ90 1003 aa18.07■□□□□ 0.48
XRCC1-201ENST00000262887 WDR33Q9C0J8 1336 aaKnown RBP18.07■□□□□ 0.48
XRCC1-201ENST00000262887 CPSF1Q10570 1443 aaKnown RBP18.07■□□□□ 0.48
XRCC1-201ENST00000262887 ANAPC15P60006 121 aa18.07■□□□□ 0.48
XRCC1-201ENST00000262887 DIAPH3Q9NSV4 1193 aa18.06■□□□□ 0.48
XRCC1-201ENST00000262887 HCLS1P14317 486 aaPredicted RBP18.06■□□□□ 0.48
XRCC1-201ENST00000262887 IDI1Q13907 227 aa18.06■□□□□ 0.48
XRCC1-201ENST00000262887 TSHZ3Q63HK5 1081 aa18.06■□□□□ 0.48
XRCC1-201ENST00000262887 DLG5Q8TDM6 1919 aa18.06■□□□□ 0.48
XRCC1-201ENST00000262887 MAP2P11137 1827 aaKnown RBP18.05■□□□□ 0.48
XRCC1-201ENST00000262887 PTPRCP08575 1304 aa18.05■□□□□ 0.48
XRCC1-201ENST00000262887 CHAF1AQ13111 956 aaPredicted RBP18.05■□□□□ 0.48
XRCC1-201ENST00000262887 SPDYE4A6NLX3 237 aa18.05■□□□□ 0.48
XRCC1-201ENST00000262887 KDM4AO75164 1064 aa18.05■□□□□ 0.48
XRCC1-201ENST00000262887 UPF3BQ9BZI7 483 aaKnown RBP18.05■□□□□ 0.48
XRCC1-201ENST00000262887 TCHHQ07283 1943 aa18.05■□□□□ 0.48
XRCC1-201ENST00000262887 MX1P20591 662 aa18.04■□□□□ 0.48
XRCC1-201ENST00000262887 TPRNQ4KMQ1 711 aa18.04■□□□□ 0.48
XRCC1-201ENST00000262887 TMEM87AQ8NBN3 555 aa18.04■□□□□ 0.48
XRCC1-201ENST00000262887 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.04■□□□□ 0.48
XRCC1-201ENST00000262887 CDK12Q9NYV4 1490 aaPredicted RBP18.04■□□□□ 0.48
XRCC1-201ENST00000262887 PLCB2Q00722 1185 aa18.03■□□□□ 0.48
XRCC1-201ENST00000262887 POGZQ7Z3K3 1410 aa18.03■□□□□ 0.48
XRCC1-201ENST00000262887 RIOK3O14730 519 aaKnown RBP18.03■□□□□ 0.48
XRCC1-201ENST00000262887 KIAA1524Q8TCG1 905 aa18.03■□□□□ 0.48
XRCC1-201ENST00000262887 RILPL2Q969X0 211 aa18.03■□□□□ 0.48
XRCC1-201ENST00000262887 SRCIN1Q9C0H9 1055 aa18.03■□□□□ 0.48
XRCC1-201ENST00000262887 TRIM6-TRIM34B2RNG4 842 aa18.02■□□□□ 0.48
XRCC1-201ENST00000262887 ANKRD7Q92527 254 aa18.02■□□□□ 0.48
XRCC1-201ENST00000262887 EXOC6BQ9Y2D4 811 aa18.02■□□□□ 0.48
XRCC1-201ENST00000262887 CHMLP26374 656 aa18.01■□□□□ 0.47
XRCC1-201ENST00000262887 PLPPR3Q6T4P5 718 aa18.01■□□□□ 0.47
XRCC1-201ENST00000262887 CNPY2Q9Y2B0 182 aa18.01■□□□□ 0.47
XRCC1-201ENST00000262887 TPM3P06753 285 aa18.01■□□□□ 0.47
XRCC1-201ENST00000262887 SSH2Q76I76 1423 aa18.01■□□□□ 0.47
XRCC1-201ENST00000262887 ATP7BP35670 1465 aa18■□□□□ 0.47
XRCC1-201ENST00000262887 U2AF2P26368 475 aaKnown RBP eCLIP18■□□□□ 0.47
XRCC1-201ENST00000262887 SLC4A10Q6U841 1118 aa18■□□□□ 0.47
XRCC1-201ENST00000262887 RPAP1Q9BWH6 1393 aaPredicted RBP18■□□□□ 0.47
XRCC1-201ENST00000262887 SLC4A2P04920 1241 aa17.99■□□□□ 0.47
XRCC1-201ENST00000262887 UBE2HP62256 183 aa17.99■□□□□ 0.47
XRCC1-201ENST00000262887 NME9Q86XW9 330 aa17.99■□□□□ 0.47
XRCC1-201ENST00000262887 PYCARDQ9ULZ3 195 aa17.99■□□□□ 0.47
XRCC1-201ENST00000262887 MLH3Q9UHC1 1453 aa17.99■□□□□ 0.47
XRCC1-201ENST00000262887 MLECQ14165 292 aa17.99■□□□□ 0.47
XRCC1-201ENST00000262887 RRS1Q15050 365 aaKnown RBP17.99■□□□□ 0.47
XRCC1-201ENST00000262887 LRRCC1Q9C099 1032 aa17.99■□□□□ 0.47
XRCC1-201ENST00000262887 KCNF1Q9H3M0 494 aa17.99■□□□□ 0.47
XRCC1-201ENST00000262887 SALL3Q9BXA9 1300 aa17.99■□□□□ 0.47
XRCC1-201ENST00000262887 CTIFO43310 598 aaKnown RBP17.99■□□□□ 0.47
XRCC1-201ENST00000262887 TAF3Q5VWG9 929 aa17.99■□□□□ 0.47
XRCC1-201ENST00000262887 CHL1O00533 1208 aa17.98■□□□□ 0.47
XRCC1-201ENST00000262887 SLC52A1Q9NWF4 448 aa17.98■□□□□ 0.47
XRCC1-201ENST00000262887 KIAA0232Q92628 1395 aa17.98■□□□□ 0.47
XRCC1-201ENST00000262887 FEZ1Q99689 392 aa17.98■□□□□ 0.47
XRCC1-201ENST00000262887 ZRANB1Q9UGI0 708 aa17.98■□□□□ 0.47
XRCC1-201ENST00000262887 IL17RAQ96F46 866 aa17.97■□□□□ 0.47
XRCC1-201ENST00000262887 ZSCAN22P10073 491 aaPredicted RBP17.97■□□□□ 0.47
XRCC1-201ENST00000262887 MCM10Q7L590 875 aa17.97■□□□□ 0.47
XRCC1-201ENST00000262887 GOLGA6L6A8MZA4 724 aa17.96■□□□□ 0.47
XRCC1-201ENST00000262887 F6X3S4 739 aa17.96■□□□□ 0.47
XRCC1-201ENST00000262887 GNAI2P04899 355 aa17.96■□□□□ 0.47
XRCC1-201ENST00000262887 KLHL34Q8N239 644 aa17.96■□□□□ 0.47
XRCC1-201ENST00000262887 FUCA2Q9BTY2 467 aa17.96■□□□□ 0.47
XRCC1-201ENST00000262887 AATKQ6ZMQ8 1374 aa17.96■□□□□ 0.47
XRCC1-201ENST00000262887 AP5Z1O43299 807 aa17.96■□□□□ 0.47
XRCC1-201ENST00000262887 FIBPO43427 364 aa17.96■□□□□ 0.47
XRCC1-201ENST00000262887 CCT4P50991 539 aaKnown RBP17.96■□□□□ 0.47
XRCC1-201ENST00000262887 TUBGCP6Q96RT7 1819 aa17.96■□□□□ 0.47
XRCC1-201ENST00000262887 EDC4Q6P2E9 1401 aaKnown RBP17.95■□□□□ 0.46
XRCC1-201ENST00000262887 GIMAP6Q6P9H5 292 aa17.95■□□□□ 0.46
XRCC1-201ENST00000262887 SPC24Q8NBT2 197 aa17.95■□□□□ 0.46
XRCC1-201ENST00000262887 COG3Q96JB2 828 aa17.95■□□□□ 0.46
XRCC1-201ENST00000262887 OGFRQ9NZT2 677 aa17.94■□□□□ 0.46
XRCC1-201ENST00000262887 STX6O43752 255 aa17.94■□□□□ 0.46
XRCC1-201ENST00000262887 AEBP1Q8IUX7 1158 aa17.94■□□□□ 0.46
XRCC1-201ENST00000262887 ATP6V1DQ9Y5K8 247 aa17.94■□□□□ 0.46
XRCC1-201ENST00000262887 IGSF3O75054 1194 aa17.94■□□□□ 0.46
XRCC1-201ENST00000262887 HSPA4P34932 840 aa17.94■□□□□ 0.46
XRCC1-201ENST00000262887 UNC5CLQ8IV45 518 aa17.94■□□□□ 0.46
XRCC1-201ENST00000262887 MYO5BQ9ULV0 1848 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms