RNA–Protein interactions for RNA: ENST00000262812.8

COPE-201, Transcript of coatomer protein complex subunit epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPE, Length 1,141 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-201ENST00000262812 LY75O60449 1722 aa24.62■■□□□ 1.53
COPE-201ENST00000262812 MTFR1LQ9H019 292 aa24.62■■□□□ 1.53
COPE-201ENST00000262812 ITPK1Q13572 414 aa24.61■■□□□ 1.53
COPE-201ENST00000262812 GAS2L2Q8NHY3 880 aa24.61■■□□□ 1.53
COPE-201ENST00000262812 PTCD1O75127 700 aaKnown RBP24.6■■□□□ 1.53
COPE-201ENST00000262812 HMGB2P26583 209 aaKnown RBP24.6■■□□□ 1.53
COPE-201ENST00000262812 LINC00116Q8NCU8 138 aa24.6■■□□□ 1.53
COPE-201ENST00000262812 AK7Q96M32 723 aa24.6■■□□□ 1.53
COPE-201ENST00000262812 SLC52A2Q9HAB3 445 aa24.6■■□□□ 1.53
COPE-201ENST00000262812 FCHSD2O94868 740 aa24.59■■□□□ 1.53
COPE-201ENST00000262812 SMIM5Q71RC9 77 aa24.59■■□□□ 1.53
COPE-201ENST00000262812 COL23A1Q86Y22 540 aaPredicted RBP24.59■■□□□ 1.53
COPE-201ENST00000262812 GNAT3A8MTJ3 354 aa24.58■■□□□ 1.53
COPE-201ENST00000262812 PTGER2P43116 358 aa24.58■■□□□ 1.53
COPE-201ENST00000262812 SLC4A9Q96Q91 983 aa24.58■■□□□ 1.53
COPE-201ENST00000262812 CASZ1Q86V15 1759 aa24.57■■□□□ 1.52
COPE-201ENST00000262812 PHF14O94880 888 aa24.56■■□□□ 1.52
COPE-201ENST00000262812 IL17REQ8NFR9 667 aa24.56■■□□□ 1.52
COPE-201ENST00000262812 SLC16A10Q8TF71 515 aa24.56■■□□□ 1.52
COPE-201ENST00000262812 SLC39A6Q13433 755 aa24.55■■□□□ 1.52
COPE-201ENST00000262812 MAP3K5Q99683 1374 aa24.54■■□□□ 1.52
COPE-201ENST00000262812 AMIGO3Q86WK7 504 aa24.54■■□□□ 1.52
COPE-201ENST00000262812 ZNF316A6NFI3 1004 aaPredicted RBP24.53■■□□□ 1.52
COPE-201ENST00000262812 MYBBP1AQ9BQG0 1328 aaKnown RBP24.53■■□□□ 1.52
COPE-201ENST00000262812 GNPATO15228 680 aa24.52■■□□□ 1.52
COPE-201ENST00000262812 TEFQ10587 303 aa24.52■■□□□ 1.52
COPE-201ENST00000262812 FLAD1Q8NFF5 587 aa24.52■■□□□ 1.52
COPE-201ENST00000262812 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.51■■□□□ 1.51
COPE-201ENST00000262812 MSL1Q68DK7 614 aa24.51■■□□□ 1.51
COPE-201ENST00000262812 SGIP1Q9BQI5 828 aa24.51■■□□□ 1.51
COPE-201ENST00000262812 NEFMP07197 916 aa24.5■■□□□ 1.51
COPE-201ENST00000262812 ARXQ96QS3 562 aa24.5■■□□□ 1.51
COPE-201ENST00000262812 C5P01031 1676 aa24.5■■□□□ 1.51
COPE-201ENST00000262812 POLD1P28340 1107 aa24.49■■□□□ 1.51
COPE-201ENST00000262812 RTF1Q92541 710 aaKnown RBP24.49■■□□□ 1.51
COPE-201ENST00000262812 C4BP0C0L5 1744 aa24.48■■□□□ 1.51
COPE-201ENST00000262812 MCM10Q7L590 875 aa24.48■■□□□ 1.51
COPE-201ENST00000262812 PRKRIP1Q9H875 184 aaPredicted RBP24.48■■□□□ 1.51
COPE-201ENST00000262812 DCTN1Q14203 1278 aa24.47■■□□□ 1.51
COPE-201ENST00000262812 SSFA2P28290 1259 aa24.46■■□□□ 1.51
COPE-201ENST00000262812 PLEKHF1Q96S99 279 aa24.46■■□□□ 1.51
COPE-201ENST00000262812 FHDC1Q9C0D6 1143 aaPredicted RBP24.46■■□□□ 1.51
COPE-201ENST00000262812 RTCBQ9Y3I0 505 aaKnown RBP24.46■■□□□ 1.51
COPE-201ENST00000262812 SCN11AQ9UI33 1791 aa24.46■■□□□ 1.51
COPE-201ENST00000262812 RC3H1Q5TC82 1133 aaKnown RBP24.45■■□□□ 1.5
COPE-201ENST00000262812 DNAJC10Q8IXB1 793 aa24.45■■□□□ 1.5
COPE-201ENST00000262812 TTC5Q8N0Z6 440 aa24.45■■□□□ 1.5
COPE-201ENST00000262812 KLHL34Q8N239 644 aa24.45■■□□□ 1.5
COPE-201ENST00000262812 PNNQ9H307 717 aaKnown RBP24.45■■□□□ 1.5
COPE-201ENST00000262812 CRKLP46109 303 aaKnown RBP24.44■■□□□ 1.5
COPE-201ENST00000262812 TRAPPC3LQ5T215 181 aa24.44■■□□□ 1.5
COPE-201ENST00000262812 TAF1LQ8IZX4 1826 aa24.43■■□□□ 1.5
COPE-201ENST00000262812 MRC1P22897 1456 aa24.43■■□□□ 1.5
COPE-201ENST00000262812 TUBGCP6Q96RT7 1819 aa24.42■■□□□ 1.5
COPE-201ENST00000262812 CNTNAP4Q9C0A0 1308 aa24.42■■□□□ 1.5
COPE-201ENST00000262812 MAPK8IP3Q9UPT6 1336 aa24.42■■□□□ 1.5
COPE-201ENST00000262812 BTBD11A6QL63 1104 aa24.42■■□□□ 1.5
COPE-201ENST00000262812 RPS6KA4O75676 772 aa24.42■■□□□ 1.5
COPE-201ENST00000262812 ZNF790Q6PG37 636 aa24.41■■□□□ 1.5
COPE-201ENST00000262812 ARHGEF1Q92888 912 aaKnown RBP24.41■■□□□ 1.5
COPE-201ENST00000262812 SYT17Q9BSW7 474 aa24.41■■□□□ 1.5
COPE-201ENST00000262812 QSER1Q2KHR3 1735 aa24.41■■□□□ 1.5
COPE-201ENST00000262812 CEMIPQ8WUJ3 1361 aa24.41■■□□□ 1.5
COPE-201ENST00000262812 KCNQ3O43525 872 aa24.4■■□□□ 1.5
COPE-201ENST00000262812 HTATSF1O43719 755 aaKnown RBP24.4■■□□□ 1.5
COPE-201ENST00000262812 NFE2L2Q16236 605 aa24.4■■□□□ 1.5
COPE-201ENST00000262812 WDR43Q15061 677 aaKnown RBP eCLIP24.39■■□□□ 1.49
COPE-201ENST00000262812 INTS5Q6P9B9 1019 aaKnown RBP24.39■■□□□ 1.49
COPE-201ENST00000262812 ZNF496Q96IT1 587 aaPredicted RBP24.39■■□□□ 1.49
COPE-201ENST00000262812 ADAMTS7Q9UKP4 1686 aa24.38■■□□□ 1.49
COPE-201ENST00000262812 CYP19A1P11511 503 aaPredicted RBP24.38■■□□□ 1.49
COPE-201ENST00000262812 RFC4P35249 363 aa24.38■■□□□ 1.49
COPE-201ENST00000262812 CCDC146Q8IYE0 955 aa24.38■■□□□ 1.49
COPE-201ENST00000262812 VSIG10Q8N0Z9 540 aa24.37■■□□□ 1.49
COPE-201ENST00000262812 CCDC87Q9NVE4 849 aa24.37■■□□□ 1.49
COPE-201ENST00000262812 MIS18AQ9NYP9 233 aa24.36■■□□□ 1.49
COPE-201ENST00000262812 KCPQ6ZWJ8 1503 aa24.35■■□□□ 1.49
COPE-201ENST00000262812 ADRA2BP18089 450 aa24.35■■□□□ 1.49
COPE-201ENST00000262812 FMNL2Q96PY5 1086 aa24.35■■□□□ 1.49
COPE-201ENST00000262812 THUMPD2Q9BTF0 503 aaKnown RBP24.35■■□□□ 1.49
COPE-201ENST00000262812 ADAMTS8Q9UP79 889 aa24.35■■□□□ 1.49
COPE-201ENST00000262812 DCAF8L1A6NGE4 600 aa24.34■■□□□ 1.49
COPE-201ENST00000262812 TAF7Q15545 349 aaPredicted RBP24.34■■□□□ 1.49
COPE-201ENST00000262812 STARD3NLO95772 234 aa24.33■■□□□ 1.49
COPE-201ENST00000262812 CANXP27824 592 aaKnown RBP24.33■■□□□ 1.49
COPE-201ENST00000262812 RIPK4P57078 832 aa24.33■■□□□ 1.49
COPE-201ENST00000262812 ZNF831Q5JPB2 1677 aa24.33■■□□□ 1.49
COPE-201ENST00000262812 UBR3Q6ZT12 1888 aa24.32■■□□□ 1.48
COPE-201ENST00000262812 HEG1Q9ULI3 1381 aa24.32■■□□□ 1.48
COPE-201ENST00000262812 NEUROD2Q15784 382 aa24.32■■□□□ 1.48
COPE-201ENST00000262812 SRP68Q9UHB9 627 aaKnown RBP24.32■■□□□ 1.48
COPE-201ENST00000262812 RRP7AQ9Y3A4 280 aaKnown RBP24.32■■□□□ 1.48
COPE-201ENST00000262812 TEX13AQ9BXU3 409 aaPredicted RBP24.31■■□□□ 1.48
COPE-201ENST00000262812 ZBTB1Q9Y2K1 713 aa24.31■■□□□ 1.48
COPE-201ENST00000262812 MMP10P09238 476 aa24.3■■□□□ 1.48
COPE-201ENST00000262812 GYS1P13807 737 aa24.3■■□□□ 1.48
COPE-201ENST00000262812 TMPOP42166 694 aaKnown RBP24.3■■□□□ 1.48
COPE-201ENST00000262812 NLGN1Q8N2Q7 840 aa24.3■■□□□ 1.48
COPE-201ENST00000262812 TJP1Q07157 1748 aa24.3■■□□□ 1.48
COPE-201ENST00000262812 NLGN2Q8NFZ4 835 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms