RNA–Protein interactions for RNA: ENST00000262150.6

CDH19-201, Transcript of cadherin 19, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH19, Length 6,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-201ENST00000262150 MAP3K2Q9Y2U5 619 aa6.56□□□□□ -1.36
CDH19-201ENST00000262150 LMTK2Q8IWU2 1503 aa6.56□□□□□ -1.36
CDH19-201ENST00000262150 POLR3AO14802 1390 aaPredicted RBP6.56□□□□□ -1.36
CDH19-201ENST00000262150 FLIIQ13045 1269 aa6.56□□□□□ -1.36
CDH19-201ENST00000262150 TRAPPC3LQ5T215 181 aa6.56□□□□□ -1.36
CDH19-201ENST00000262150 FAM182BQ5T319 152 aa6.56□□□□□ -1.36
CDH19-201ENST00000262150 SAMD1Q6SPF0 538 aaPredicted RBP6.56□□□□□ -1.36
CDH19-201ENST00000262150 SSH1Q8WYL5 1049 aa6.56□□□□□ -1.36
CDH19-201ENST00000262150 PARP3Q9Y6F1 533 aa6.56□□□□□ -1.36
CDH19-201ENST00000262150 ZMYM4Q5VZL5 1548 aa6.56□□□□□ -1.36
CDH19-201ENST00000262150 NCBP3Q53F19 620 aaKnown RBP6.55□□□□□ -1.36
CDH19-201ENST00000262150 DZIP3Q86Y13 1208 aaKnown RBP6.55□□□□□ -1.36
CDH19-201ENST00000262150 SPRYD3Q8NCJ5 442 aa6.55□□□□□ -1.36
CDH19-201ENST00000262150 XAGE3Q8WTP9 111 aa6.55□□□□□ -1.36
CDH19-201ENST00000262150 CHPF2Q9P2E5 772 aa6.55□□□□□ -1.36
CDH19-201ENST00000262150 METTL24Q5JXM2 366 aa6.55□□□□□ -1.36
CDH19-201ENST00000262150 ANKRD13DQ6ZTN6 518 aa6.55□□□□□ -1.36
CDH19-201ENST00000262150 ARHGEF25Q86VW2 580 aa6.55□□□□□ -1.36
CDH19-201ENST00000262150 ANP32BQ92688 251 aaKnown RBP6.55□□□□□ -1.36
CDH19-201ENST00000262150 SBNO2Q9Y2G9 1366 aa6.55□□□□□ -1.36
CDH19-201ENST00000262150 ALKQ9UM73 1620 aa6.55□□□□□ -1.36
CDH19-201ENST00000262150 PER1O15534 1290 aaPredicted RBP6.55□□□□□ -1.36
CDH19-201ENST00000262150 IFIT5Q13325 482 aaKnown RBP6.55□□□□□ -1.36
CDH19-201ENST00000262150 DDX46Q7L014 1031 aaKnown RBP6.55□□□□□ -1.36
CDH19-201ENST00000262150 KRT27Q7Z3Y8 459 aa6.55□□□□□ -1.36
CDH19-201ENST00000262150 FSD1Q9BTV5 496 aa6.55□□□□□ -1.36
CDH19-201ENST00000262150 SPINK5Q9NQ38 1064 aaPredicted RBP6.55□□□□□ -1.36
CDH19-201ENST00000262150 NIP7Q9Y221 180 aaKnown RBP eCLIP6.55□□□□□ -1.36
CDH19-201ENST00000262150 USP6P35125 1406 aa6.55□□□□□ -1.36
CDH19-201ENST00000262150 MADDQ8WXG6 1647 aa6.55□□□□□ -1.36
CDH19-201ENST00000262150 PARD3Q8TEW0 1356 aa6.55□□□□□ -1.36
CDH19-201ENST00000262150 COPS6Q7L5N1 327 aa6.55□□□□□ -1.36
CDH19-201ENST00000262150 CWC25Q9NXE8 425 aaPredicted RBP6.55□□□□□ -1.36
CDH19-201ENST00000262150 PPRC1Q5VV67 1664 aaKnown RBP6.55□□□□□ -1.36
CDH19-201ENST00000262150 PI4KAP2A4QPH2 592 aa6.55□□□□□ -1.36
CDH19-201ENST00000262150 PDE3AQ14432 1141 aa6.55□□□□□ -1.36
CDH19-201ENST00000262150 SEPT12Q8IYM1 358 aa6.55□□□□□ -1.36
CDH19-201ENST00000262150 PI4KAP1Q8N8J0 262 aa6.55□□□□□ -1.36
CDH19-201ENST00000262150 CWC22Q9HCG8 908 aaKnown RBP6.55□□□□□ -1.36
CDH19-201ENST00000262150 C6orf229H3BNL8 230 aa6.54□□□□□ -1.36
CDH19-201ENST00000262150 CHAF1AQ13111 956 aaPredicted RBP6.54□□□□□ -1.36
CDH19-201ENST00000262150 AAMPQ13685 434 aa6.54□□□□□ -1.36
CDH19-201ENST00000262150 FAM161AQ3B820 660 aa6.54□□□□□ -1.36
CDH19-201ENST00000262150 RSPH6AQ9H0K4 717 aa6.54□□□□□ -1.36
CDH19-201ENST00000262150 ANKARQ7Z5J8 1434 aa6.54□□□□□ -1.36
CDH19-201ENST00000262150 TRIM37O94972 964 aa6.54□□□□□ -1.36
CDH19-201ENST00000262150 ALDH1L2Q3SY69 923 aa6.54□□□□□ -1.36
CDH19-201ENST00000262150 JARID2Q92833 1246 aaPredicted RBP6.54□□□□□ -1.36
CDH19-201ENST00000262150 CEP170BQ9Y4F5 1589 aaPredicted RBP6.54□□□□□ -1.36
CDH19-201ENST00000262150 SPHKAPQ2M3C7 1700 aa6.54□□□□□ -1.36
CDH19-201ENST00000262150 CARD10Q9BWT7 1032 aa6.54□□□□□ -1.36
CDH19-201ENST00000262150 JCADQ9P266 1359 aa6.54□□□□□ -1.36
CDH19-201ENST00000262150 ANKRD18BA2A2Z9 1011 aa6.54□□□□□ -1.36
CDH19-201ENST00000262150 DHX16O60231 1041 aaKnown RBP6.54□□□□□ -1.36
CDH19-201ENST00000262150 FAM196AQ6ZSG2 479 aa6.54□□□□□ -1.36
CDH19-201ENST00000262150 LGR6Q9HBX8 967 aa6.54□□□□□ -1.36
CDH19-201ENST00000262150 UBE3BQ7Z3V4 1068 aa6.54□□□□□ -1.36
CDH19-201ENST00000262150 TMEM57Q8N5G2 664 aa6.54□□□□□ -1.36
CDH19-201ENST00000262150 TRDNQ13061 729 aa6.53□□□□□ -1.36
CDH19-201ENST00000262150 MVPQ14764 893 aaKnown RBP6.53□□□□□ -1.36
CDH19-201ENST00000262150 VPS53Q5VIR6 699 aa6.53□□□□□ -1.36
CDH19-201ENST00000262150 SYNE3Q6ZMZ3 975 aa6.53□□□□□ -1.36
CDH19-201ENST00000262150 IL16Q14005 1332 aa6.53□□□□□ -1.36
CDH19-201ENST00000262150 WDR17Q8IZU2 1322 aa6.53□□□□□ -1.36
CDH19-201ENST00000262150 FKBP4Q02790 459 aaKnown RBP eCLIP6.53□□□□□ -1.36
CDH19-201ENST00000262150 ZNF790Q6PG37 636 aa6.53□□□□□ -1.36
CDH19-201ENST00000262150 AACSQ86V21 672 aa6.53□□□□□ -1.36
CDH19-201ENST00000262150 SLC52A2Q9HAB3 445 aa6.53□□□□□ -1.36
CDH19-201ENST00000262150 E9PCH4 1651 aa6.53□□□□□ -1.36
CDH19-201ENST00000262150 GOLGA6L4A6NEF3 574 aa6.53□□□□□ -1.36
CDH19-201ENST00000262150 RARSP54136 660 aaKnown RBP6.53□□□□□ -1.36
CDH19-201ENST00000262150 TPTE2Q6XPS3 522 aa6.53□□□□□ -1.36
CDH19-201ENST00000262150 CDC5LQ99459 802 aaKnown RBP6.53□□□□□ -1.36
CDH19-201ENST00000262150 LRRCC1Q9C099 1032 aa6.53□□□□□ -1.36
CDH19-201ENST00000262150 ANO2Q9NQ90 1003 aa6.53□□□□□ -1.36
CDH19-201ENST00000262150 RAI14Q9P0K7 980 aa6.53□□□□□ -1.36
CDH19-201ENST00000262150 ATP7BP35670 1465 aa6.52□□□□□ -1.37
CDH19-201ENST00000262150 IFIT1P09914 478 aaKnown RBP6.52□□□□□ -1.37
CDH19-201ENST00000262150 ZKSCAN1P17029 563 aaPredicted RBP6.52□□□□□ -1.37
CDH19-201ENST00000262150 CAVIN4Q5BKX8 364 aa6.52□□□□□ -1.37
CDH19-201ENST00000262150 NLRP3Q96P20 1036 aa6.52□□□□□ -1.37
CDH19-201ENST00000262150 INSRP06213 1382 aa6.52□□□□□ -1.37
CDH19-201ENST00000262150 PIK3C2BO00750 1634 aa6.52□□□□□ -1.37
CDH19-201ENST00000262150 CNTROBQ8N137 903 aa6.52□□□□□ -1.37
CDH19-201ENST00000262150 C8orf58Q8NAV2 365 aa6.52□□□□□ -1.37
CDH19-201ENST00000262150 UTP14AQ9BVJ6 771 aaKnown RBP6.52□□□□□ -1.37
CDH19-201ENST00000262150 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.52□□□□□ -1.37
CDH19-201ENST00000262150 IL1RAPL2Q9NP60 686 aa6.52□□□□□ -1.37
CDH19-201ENST00000262150 ABCF2Q9UG63 623 aa6.52□□□□□ -1.37
CDH19-201ENST00000262150 KDM5AP29375 1690 aaKnown RBP6.52□□□□□ -1.37
CDH19-201ENST00000262150 PHKG2P15735 406 aa6.52□□□□□ -1.37
CDH19-201ENST00000262150 AKAP17AQ02040 695 aaKnown RBP6.52□□□□□ -1.37
CDH19-201ENST00000262150 ZSCAN29Q8IWY8 852 aaPredicted RBP6.52□□□□□ -1.37
CDH19-201ENST00000262150 NYXQ9GZU5 481 aa6.52□□□□□ -1.37
CDH19-201ENST00000262150 C1orf167Q5SNV9 1468 aa6.51□□□□□ -1.37
CDH19-201ENST00000262150 RBM6P78332 1123 aaKnown RBP6.51□□□□□ -1.37
CDH19-201ENST00000262150 KRT24Q2M2I5 525 aa6.51□□□□□ -1.37
CDH19-201ENST00000262150 CCDC152Q4G0S7 254 aa6.51□□□□□ -1.37
CDH19-201ENST00000262150 DNAJC10Q8IXB1 793 aa6.51□□□□□ -1.37
CDH19-201ENST00000262150 CCDC87Q9NVE4 849 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms