RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 ROBO2Q9HCK4 1378 aa15.92■□□□□ 0.14
SNX1-201ENST00000261889 IL25Q9H293 177 aa15.92■□□□□ 0.14
SNX1-201ENST00000261889 CEP85Q6P2H3 762 aa15.91■□□□□ 0.14
SNX1-201ENST00000261889 RABEP1Q15276 862 aa15.91■□□□□ 0.14
SNX1-201ENST00000261889 NUTM2GQ5VZR2 741 aa15.91■□□□□ 0.14
SNX1-201ENST00000261889 UNC5CLQ8IV45 518 aa15.91■□□□□ 0.14
SNX1-201ENST00000261889 LRRC7Q96NW7 1537 aa15.91■□□□□ 0.14
SNX1-201ENST00000261889 INTS3Q68E01 1043 aaKnown RBP15.9■□□□□ 0.14
SNX1-201ENST00000261889 TMX3Q96JJ7 454 aa15.9■□□□□ 0.14
SNX1-201ENST00000261889 AKAP12Q02952 1782 aa15.9■□□□□ 0.14
SNX1-201ENST00000261889 HSP90AB2PQ58FF8 381 aa15.89■□□□□ 0.13
SNX1-201ENST00000261889 DCTPP1Q9H773 170 aa15.89■□□□□ 0.13
SNX1-201ENST00000261889 ABCC4O15439 1325 aa15.89■□□□□ 0.13
SNX1-201ENST00000261889 ST18O60284 1047 aa15.89■□□□□ 0.13
SNX1-201ENST00000261889 PUS7Q96PZ0 661 aaKnown RBP15.89■□□□□ 0.13
SNX1-201ENST00000261889 IL13P35225 146 aa15.88■□□□□ 0.13
SNX1-201ENST00000261889 NUTM1Q86Y26 1132 aa15.88■□□□□ 0.13
SNX1-201ENST00000261889 TTC12Q9H892 705 aaPredicted RBP15.88■□□□□ 0.13
SNX1-201ENST00000261889 ITSN1Q15811 1721 aa15.88■□□□□ 0.13
SNX1-201ENST00000261889 OFD1O75665 1012 aa15.87■□□□□ 0.13
SNX1-201ENST00000261889 LTV1Q96GA3 475 aaPredicted RBP15.87■□□□□ 0.13
SNX1-201ENST00000261889 PPP1R9BQ96SB3 815 aa15.87■□□□□ 0.13
SNX1-201ENST00000261889 USP25Q9UHP3 1055 aa15.87■□□□□ 0.13
SNX1-201ENST00000261889 COL3A1P02461 1466 aaPredicted RBP15.87■□□□□ 0.13
SNX1-201ENST00000261889 IL16Q14005 1332 aa15.87■□□□□ 0.13
SNX1-201ENST00000261889 CFAP44Q96MT7 982 aa15.87■□□□□ 0.13
SNX1-201ENST00000261889 ZHX1Q9UKY1 873 aaPredicted RBP15.87■□□□□ 0.13
SNX1-201ENST00000261889 LTBP4Q8N2S1 1624 aa15.87■□□□□ 0.13
SNX1-201ENST00000261889 API5Q9BZZ5 524 aaKnown RBP15.87■□□□□ 0.13
SNX1-201ENST00000261889 NRKQ7Z2Y5 1582 aa15.87■□□□□ 0.13
SNX1-201ENST00000261889 IFT57Q9NWB7 429 aa15.86■□□□□ 0.13
SNX1-201ENST00000261889 MON2Q7Z3U7 1717 aa15.86■□□□□ 0.13
SNX1-201ENST00000261889 PNMA6EA0A0J9YXQ4 647 aa15.86■□□□□ 0.13
SNX1-201ENST00000261889 IGSF3O75054 1194 aa15.86■□□□□ 0.13
SNX1-201ENST00000261889 NUCB2P80303 420 aa15.86■□□□□ 0.13
SNX1-201ENST00000261889 RGPD8O14715 1765 aaPredicted RBP15.85■□□□□ 0.13
SNX1-201ENST00000261889 CD163L1Q9NR16 1453 aa15.84■□□□□ 0.13
SNX1-201ENST00000261889 COG3Q96JB2 828 aa15.84■□□□□ 0.13
SNX1-201ENST00000261889 USP54Q70EL1 1684 aa15.84■□□□□ 0.13
SNX1-201ENST00000261889 ANKRD44Q8N8A2 993 aa15.84■□□□□ 0.13
SNX1-201ENST00000261889 FIBPO43427 364 aa15.84■□□□□ 0.13
SNX1-201ENST00000261889 CASC1Q6TDU7 716 aa15.84■□□□□ 0.13
SNX1-201ENST00000261889 ERC2O15083 957 aa15.83■□□□□ 0.13
SNX1-201ENST00000261889 ANXA1P04083 346 aa15.83■□□□□ 0.13
SNX1-201ENST00000261889 PDE1AP54750 535 aa15.83■□□□□ 0.13
SNX1-201ENST00000261889 SPC24Q8NBT2 197 aa15.83■□□□□ 0.13
SNX1-201ENST00000261889 CYP2E1P05181 493 aaPredicted RBP15.83■□□□□ 0.12
SNX1-201ENST00000261889 TPM2P07951 284 aa15.83■□□□□ 0.12
SNX1-201ENST00000261889 ATP7BP35670 1465 aa15.82■□□□□ 0.12
SNX1-201ENST00000261889 NSD2O96028 1365 aa15.82■□□□□ 0.12
SNX1-201ENST00000261889 HCLS1P14317 486 aaPredicted RBP15.82■□□□□ 0.12
SNX1-201ENST00000261889 FKBP5Q13451 457 aaPredicted RBP15.82■□□□□ 0.12
SNX1-201ENST00000261889 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.82■□□□□ 0.12
SNX1-201ENST00000261889 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.82■□□□□ 0.12
SNX1-201ENST00000261889 ZNF853P0CG23 659 aa15.82■□□□□ 0.12
SNX1-201ENST00000261889 HSPA2P54652 639 aa15.82■□□□□ 0.12
SNX1-201ENST00000261889 ZNF445P59923 1031 aa15.82■□□□□ 0.12
SNX1-201ENST00000261889 SLC26A8Q96RN1 970 aa15.82■□□□□ 0.12
SNX1-201ENST00000261889 CNPY2Q9Y2B0 182 aa15.82■□□□□ 0.12
SNX1-201ENST00000261889 EIF4A2Q14240 407 aaKnown RBP15.81■□□□□ 0.12
SNX1-201ENST00000261889 KCNA6P17658 529 aa15.81■□□□□ 0.12
SNX1-201ENST00000261889 TSPYL4Q9UJ04 414 aa15.81■□□□□ 0.12
SNX1-201ENST00000261889 ANKRD26Q9UPS8 1709 aa15.81■□□□□ 0.12
SNX1-201ENST00000261889 FAM173BQ6P4H8 233 aa15.81■□□□□ 0.12
SNX1-201ENST00000261889 NOL7Q9UMY1 257 aaKnown RBP15.81■□□□□ 0.12
SNX1-201ENST00000261889 SPG7Q9UQ90 795 aa15.81■□□□□ 0.12
SNX1-201ENST00000261889 PPFIA3O75145 1194 aa15.8■□□□□ 0.12
SNX1-201ENST00000261889 LRSAM1Q6UWE0 723 aa15.8■□□□□ 0.12
SNX1-201ENST00000261889 TCEANC2Q96MN5 208 aa15.8■□□□□ 0.12
SNX1-201ENST00000261889 ZKSCAN5Q9Y2L8 839 aa15.8■□□□□ 0.12
SNX1-201ENST00000261889 RTL1A6NKG5 1358 aa15.8■□□□□ 0.12
SNX1-201ENST00000261889 USP48Q86UV5 1035 aa15.8■□□□□ 0.12
SNX1-201ENST00000261889 PDCL3Q9H2J4 239 aa15.8■□□□□ 0.12
SNX1-201ENST00000261889 ADGRL3Q9HAR2 1447 aa15.8■□□□□ 0.12
SNX1-201ENST00000261889 REC8O95072 547 aa15.79■□□□□ 0.12
SNX1-201ENST00000261889 COL9A3Q14050 684 aaPredicted RBP15.79■□□□□ 0.12
SNX1-201ENST00000261889 NUDT16Q96DE0 195 aaKnown RBP15.79■□□□□ 0.12
SNX1-201ENST00000261889 ISY1Q9ULR0 285 aaKnown RBP15.79■□□□□ 0.12
SNX1-201ENST00000261889 AMOTL2Q9Y2J4 779 aa15.79■□□□□ 0.12
SNX1-201ENST00000261889 TAOK2Q9UL54 1235 aa15.79■□□□□ 0.12
SNX1-201ENST00000261889 DCCP43146 1447 aa15.79■□□□□ 0.12
SNX1-201ENST00000261889 EIF2S2P20042 333 aaKnown RBP15.79■□□□□ 0.12
SNX1-201ENST00000261889 GIMAP6Q6P9H5 292 aa15.79■□□□□ 0.12
SNX1-201ENST00000261889 USHBP1Q8N6Y0 703 aa15.79■□□□□ 0.12
SNX1-201ENST00000261889 MARF1Q9Y4F3 1742 aaKnown RBP15.78■□□□□ 0.12
SNX1-201ENST00000261889 ARHGAP45Q92619 1136 aa15.78■□□□□ 0.12
SNX1-201ENST00000261889 LRRFIP2Q9Y608 721 aaKnown RBP15.78■□□□□ 0.12
SNX1-201ENST00000261889 FERMT3Q86UX7 667 aa15.78■□□□□ 0.12
SNX1-201ENST00000261889 ATP10DQ9P241 1426 aa15.78■□□□□ 0.12
SNX1-201ENST00000261889 SPDYE4A6NLX3 237 aa15.78■□□□□ 0.12
SNX1-201ENST00000261889 CBX1P83916 185 aa15.78■□□□□ 0.12
SNX1-201ENST00000261889 ANKARQ7Z5J8 1434 aa15.77■□□□□ 0.11
SNX1-201ENST00000261889 TSPY26PQ9H489 355 aa15.76■□□□□ 0.11
SNX1-201ENST00000261889 PNPLA6Q8IY17 1366 aa15.76■□□□□ 0.11
SNX1-201ENST00000261889 CWC27Q6UX04 472 aaKnown RBP15.76■□□□□ 0.11
SNX1-201ENST00000261889 ESYT1Q9BSJ8 1104 aa15.76■□□□□ 0.11
SNX1-201ENST00000261889 CAMK4Q16566 473 aa15.76■□□□□ 0.11
SNX1-201ENST00000261889 C14orf37Q86TY3 774 aa15.76■□□□□ 0.11
SNX1-201ENST00000261889 MX1P20591 662 aa15.75■□□□□ 0.11
SNX1-201ENST00000261889 RBM33Q96EV2 1170 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms