RNA–Protein interactions for RNA: ENST00000259883.3

PGBD1-201, Transcript of piggyBac transposable element derived 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGBD1, Length 3,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1-201ENST00000259883 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.1■□□□□ 0.17
PGBD1-201ENST00000259883 SURF6O75683 361 aaKnown RBP16.09■□□□□ 0.17
PGBD1-201ENST00000259883 ESYT1Q9BSJ8 1104 aa16.09■□□□□ 0.17
PGBD1-201ENST00000259883 TTC21BQ7Z4L5 1316 aa16.09■□□□□ 0.17
PGBD1-201ENST00000259883 RRP9O43818 475 aaKnown RBP16.09■□□□□ 0.17
PGBD1-201ENST00000259883 FLIIQ13045 1269 aa16.09■□□□□ 0.17
PGBD1-201ENST00000259883 PPP1R9BQ96SB3 815 aa16.09■□□□□ 0.17
PGBD1-201ENST00000259883 FIBPO43427 364 aa16.08■□□□□ 0.17
PGBD1-201ENST00000259883 OS9Q13438 667 aaPredicted RBP16.08■□□□□ 0.17
PGBD1-201ENST00000259883 SPG7Q9UQ90 795 aa16.08■□□□□ 0.17
PGBD1-201ENST00000259883 KNDC1Q76NI1 1749 aa16.08■□□□□ 0.16
PGBD1-201ENST00000259883 CYP2E1P05181 493 aaPredicted RBP16.08■□□□□ 0.16
PGBD1-201ENST00000259883 MCCP23508 829 aa16.08■□□□□ 0.16
PGBD1-201ENST00000259883 PHAXQ9H814 394 aaKnown RBP16.08■□□□□ 0.16
PGBD1-201ENST00000259883 CWC22Q9HCG8 908 aaKnown RBP16.08■□□□□ 0.16
PGBD1-201ENST00000259883 ZNF445P59923 1031 aa16.08■□□□□ 0.16
PGBD1-201ENST00000259883 EDC4Q6P2E9 1401 aaKnown RBP16.07■□□□□ 0.16
PGBD1-201ENST00000259883 UQCRHLA0A096LP55 91 aa16.07■□□□□ 0.16
PGBD1-201ENST00000259883 UQCRHP07919 91 aa16.07■□□□□ 0.16
PGBD1-201ENST00000259883 CWC27Q6UX04 472 aaKnown RBP16.07■□□□□ 0.16
PGBD1-201ENST00000259883 CEBPAP49715 358 aaPredicted RBP16.06■□□□□ 0.16
PGBD1-201ENST00000259883 USP25Q9UHP3 1055 aa16.06■□□□□ 0.16
PGBD1-201ENST00000259883 DIP2CQ9Y2E4 1556 aa16.06■□□□□ 0.16
PGBD1-201ENST00000259883 CHMLP26374 656 aa16.05■□□□□ 0.16
PGBD1-201ENST00000259883 LRSAM1Q6UWE0 723 aa16.05■□□□□ 0.16
PGBD1-201ENST00000259883 RGS12O14924 1447 aa16.05■□□□□ 0.16
PGBD1-201ENST00000259883 NLRP6P59044 892 aa16.05■□□□□ 0.16
PGBD1-201ENST00000259883 EYA1Q99502 592 aa16.05■□□□□ 0.16
PGBD1-201ENST00000259883 CNPY2Q9Y2B0 182 aa16.05■□□□□ 0.16
PGBD1-201ENST00000259883 UBTFL1P0CB47 393 aaPredicted RBP16.05■□□□□ 0.16
PGBD1-201ENST00000259883 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.05■□□□□ 0.16
PGBD1-201ENST00000259883 USP48Q86UV5 1035 aa16.05■□□□□ 0.16
PGBD1-201ENST00000259883 OFD1O75665 1012 aa16.04■□□□□ 0.16
PGBD1-201ENST00000259883 PTPRCP08575 1304 aa16.04■□□□□ 0.16
PGBD1-201ENST00000259883 CCT4P50991 539 aaKnown RBP16.04■□□□□ 0.16
PGBD1-201ENST00000259883 PKNOX2Q96KN3 472 aa16.04■□□□□ 0.16
PGBD1-201ENST00000259883 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.04■□□□□ 0.16
PGBD1-201ENST00000259883 HAP1P54257 671 aaPredicted RBP16.03■□□□□ 0.16
PGBD1-201ENST00000259883 TSPY26PQ9H489 355 aa16.03■□□□□ 0.16
PGBD1-201ENST00000259883 TTC12Q9H892 705 aaPredicted RBP16.03■□□□□ 0.16
PGBD1-201ENST00000259883 DLG5Q8TDM6 1919 aa16.03■□□□□ 0.16
PGBD1-201ENST00000259883 SRGAP3O43295 1099 aa16.03■□□□□ 0.16
PGBD1-201ENST00000259883 TCEANC2Q96MN5 208 aa16.03■□□□□ 0.16
PGBD1-201ENST00000259883 TMEM131LA2VDJ0 1609 aa16.03■□□□□ 0.16
PGBD1-201ENST00000259883 TPM2P07951 284 aa16.02■□□□□ 0.16
PGBD1-201ENST00000259883 HCLS1P14317 486 aaPredicted RBP16.02■□□□□ 0.16
PGBD1-201ENST00000259883 KIF20BQ96Q89 1820 aa16.02■□□□□ 0.16
PGBD1-201ENST00000259883 PRDM10Q9NQV6 1147 aa16.02■□□□□ 0.16
PGBD1-201ENST00000259883 CCDC9Q9Y3X0 531 aaKnown RBP16.02■□□□□ 0.16
PGBD1-201ENST00000259883 HDGFL1Q5TGJ6 251 aa16.02■□□□□ 0.15
PGBD1-201ENST00000259883 PPP1R42Q7Z4L9 355 aa16.02■□□□□ 0.15
PGBD1-201ENST00000259883 FERMT3Q86UX7 667 aa16.01■□□□□ 0.15
PGBD1-201ENST00000259883 CDK12Q9NYV4 1490 aaPredicted RBP16.01■□□□□ 0.15
PGBD1-201ENST00000259883 VPS37CA5D8V6 355 aaPredicted RBP16.01■□□□□ 0.15
PGBD1-201ENST00000259883 SPC24Q8NBT2 197 aa16.01■□□□□ 0.15
PGBD1-201ENST00000259883 CLEC17AQ6ZS10 378 aa16■□□□□ 0.15
PGBD1-201ENST00000259883 NOL7Q9UMY1 257 aaKnown RBP16■□□□□ 0.15
PGBD1-201ENST00000259883 ZKSCAN5Q9Y2L8 839 aa16■□□□□ 0.15
PGBD1-201ENST00000259883 ATP7BP35670 1465 aa16■□□□□ 0.15
PGBD1-201ENST00000259883 CPSF1Q10570 1443 aaKnown RBP16■□□□□ 0.15
PGBD1-201ENST00000259883 ROBO2Q9HCK4 1378 aa16■□□□□ 0.15
PGBD1-201ENST00000259883 BRD1O95696 1058 aa16■□□□□ 0.15
PGBD1-201ENST00000259883 CCDC83Q8IWF9 413 aa16■□□□□ 0.15
PGBD1-201ENST00000259883 RASEFQ8IZ41 740 aa16■□□□□ 0.15
PGBD1-201ENST00000259883 NBPF7P0C2Y1 421 aaPredicted RBP15.99■□□□□ 0.15
PGBD1-201ENST00000259883 KCNJ4P48050 445 aa15.99■□□□□ 0.15
PGBD1-201ENST00000259883 CCDC30Q5VVM6 783 aa15.99■□□□□ 0.15
PGBD1-201ENST00000259883 FAM173BQ6P4H8 233 aa15.99■□□□□ 0.15
PGBD1-201ENST00000259883 LMOD2Q6P5Q4 547 aa15.99■□□□□ 0.15
PGBD1-201ENST00000259883 GIMAP6Q6P9H5 292 aa15.99■□□□□ 0.15
PGBD1-201ENST00000259883 SRCIN1Q9C0H9 1055 aa15.99■□□□□ 0.15
PGBD1-201ENST00000259883 TAOK2Q9UL54 1235 aa15.99■□□□□ 0.15
PGBD1-201ENST00000259883 GNAI3P08754 354 aa15.99■□□□□ 0.15
PGBD1-201ENST00000259883 NECAB1Q8N987 351 aa15.99■□□□□ 0.15
PGBD1-201ENST00000259883 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.99■□□□□ 0.15
PGBD1-201ENST00000259883 ARHGAP31Q2M1Z3 1444 aa15.99■□□□□ 0.15
PGBD1-201ENST00000259883 USP44Q9H0E7 712 aa15.99■□□□□ 0.15
PGBD1-201ENST00000259883 KCNQ3O43525 872 aa15.98■□□□□ 0.15
PGBD1-201ENST00000259883 CASTP20810 708 aaKnown RBP15.98■□□□□ 0.15
PGBD1-201ENST00000259883 PA2G4Q9UQ80 394 aaKnown RBP15.98■□□□□ 0.15
PGBD1-201ENST00000259883 MBD3O95983 291 aa15.98■□□□□ 0.15
PGBD1-201ENST00000259883 ATP8B2P98198 1209 aa15.98■□□□□ 0.15
PGBD1-201ENST00000259883 TAF7Q15545 349 aaPredicted RBP15.98■□□□□ 0.15
PGBD1-201ENST00000259883 A2ML1A8K2U0 1454 aa15.98■□□□□ 0.15
PGBD1-201ENST00000259883 PREX1Q8TCU6 1659 aa15.98■□□□□ 0.15
PGBD1-201ENST00000259883 LARGE1O95461 756 aa15.97■□□□□ 0.15
PGBD1-201ENST00000259883 PPFIA3O75145 1194 aa15.97■□□□□ 0.15
PGBD1-201ENST00000259883 FOSBP53539 338 aa15.97■□□□□ 0.15
PGBD1-201ENST00000259883 AK2P54819 239 aa15.97■□□□□ 0.15
PGBD1-201ENST00000259883 AATKQ6ZMQ8 1374 aa15.97■□□□□ 0.15
PGBD1-201ENST00000259883 IL17REQ8NFR9 667 aa15.97■□□□□ 0.15
PGBD1-201ENST00000259883 CCDC39Q9UFE4 941 aa15.97■□□□□ 0.15
PGBD1-201ENST00000259883 ANKRD26Q9UPS8 1709 aa15.96■□□□□ 0.15
PGBD1-201ENST00000259883 SETD1BQ9UPS6 1966 aaKnown RBP15.96■□□□□ 0.15
PGBD1-201ENST00000259883 LTKP29376 864 aa15.96■□□□□ 0.15
PGBD1-201ENST00000259883 CAMK4Q16566 473 aa15.96■□□□□ 0.15
PGBD1-201ENST00000259883 SMC3Q9UQE7 1217 aa15.96■□□□□ 0.15
PGBD1-201ENST00000259883 SOS1Q07889 1333 aaPredicted RBP15.96■□□□□ 0.15
PGBD1-201ENST00000259883 TSPOAP1O95153 1857 aa15.96■□□□□ 0.15
PGBD1-201ENST00000259883 GNAT3A8MTJ3 354 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms