RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 PPP1R42Q7Z4L9 355 aa5.71□□□□□ -1.5
USP44-201ENST00000258499 JAKMIP1Q96N16 626 aaKnown RBP5.71□□□□□ -1.5
USP44-201ENST00000258499 LMBRD1Q9NUN5 540 aa5.71□□□□□ -1.5
USP44-201ENST00000258499 CASTP20810 708 aaKnown RBP5.71□□□□□ -1.5
USP44-201ENST00000258499 STK3Q13188 491 aa5.71□□□□□ -1.5
USP44-201ENST00000258499 ZRSR1Q15695 479 aaKnown RBP5.71□□□□□ -1.5
USP44-201ENST00000258499 CCDC83Q8IWF9 413 aa5.71□□□□□ -1.5
USP44-201ENST00000258499 UBE2Q2Q8WVN8 375 aa5.71□□□□□ -1.5
USP44-201ENST00000258499 ZNF830Q96NB3 372 aaPredicted RBP5.71□□□□□ -1.5
USP44-201ENST00000258499 IQSEC2Q5JU85 1478 aa5.71□□□□□ -1.5
USP44-201ENST00000258499 MAP3K19Q56UN5 1328 aa5.71□□□□□ -1.5
USP44-201ENST00000258499 KIF1BO60333 1816 aa5.71□□□□□ -1.5
USP44-201ENST00000258499 A0A0G2JS52 829 aa5.71□□□□□ -1.5
USP44-201ENST00000258499 ZNF853P0CG23 659 aa5.71□□□□□ -1.5
USP44-201ENST00000258499 CSB-PGBD3P0DP91 1061 aa5.71□□□□□ -1.5
USP44-201ENST00000258499 CPA1P15085 419 aa5.71□□□□□ -1.5
USP44-201ENST00000258499 PSME1Q06323 249 aa5.71□□□□□ -1.5
USP44-201ENST00000258499 G3BP1Q13283 466 aaKnown RBP eCLIP5.71□□□□□ -1.5
USP44-201ENST00000258499 CSPP1Q1MSJ5 1256 aa5.71□□□□□ -1.5
USP44-201ENST00000258499 PALD1Q9ULE6 856 aa5.71□□□□□ -1.5
USP44-201ENST00000258499 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.71□□□□□ -1.5
USP44-201ENST00000258499 SHROOM2Q13796 1616 aa5.7□□□□□ -1.5
USP44-201ENST00000258499 PRPF40BQ6NWY9 871 aaKnown RBP5.7□□□□□ -1.5
USP44-201ENST00000258499 FBXW7Q969H0 707 aa5.7□□□□□ -1.5
USP44-201ENST00000258499 EYA1Q99502 592 aa5.7□□□□□ -1.5
USP44-201ENST00000258499 TMEM63CQ9P1W3 806 aa5.7□□□□□ -1.5
USP44-201ENST00000258499 AMOTL2Q9Y2J4 779 aa5.7□□□□□ -1.5
USP44-201ENST00000258499 RTL1A6NKG5 1358 aa5.7□□□□□ -1.5
USP44-201ENST00000258499 NLRP1Q9C000 1473 aa5.7□□□□□ -1.5
USP44-201ENST00000258499 TULP4Q9NRJ4 1543 aa5.7□□□□□ -1.5
USP44-201ENST00000258499 PI4KAP2A4QPH2 592 aa5.7□□□□□ -1.5
USP44-201ENST00000258499 ZNF530Q6P9A1 599 aaPredicted RBP5.7□□□□□ -1.5
USP44-201ENST00000258499 LRSAM1Q6UWE0 723 aa5.7□□□□□ -1.5
USP44-201ENST00000258499 PI4KAP1Q8N8J0 262 aa5.7□□□□□ -1.5
USP44-201ENST00000258499 BICD2Q8TD16 824 aa5.7□□□□□ -1.5
USP44-201ENST00000258499 FSD1Q9BTV5 496 aa5.7□□□□□ -1.5
USP44-201ENST00000258499 PHAXQ9H814 394 aaKnown RBP5.7□□□□□ -1.5
USP44-201ENST00000258499 H3BQV1 296 aa5.7□□□□□ -1.5
USP44-201ENST00000258499 HCLS1P14317 486 aaPredicted RBP5.7□□□□□ -1.5
USP44-201ENST00000258499 CHMLP26374 656 aa5.7□□□□□ -1.5
USP44-201ENST00000258499 HSP90AB4PQ58FF6 505 aa5.7□□□□□ -1.5
USP44-201ENST00000258499 IFFO2Q5TF58 517 aa5.7□□□□□ -1.5
USP44-201ENST00000258499 AACSQ86V21 672 aa5.7□□□□□ -1.5
USP44-201ENST00000258499 TCEANC2Q96MN5 208 aa5.7□□□□□ -1.5
USP44-201ENST00000258499 BRPF1P55201 1214 aaPredicted RBP5.69□□□□□ -1.5
USP44-201ENST00000258499 CEBPZQ03701 1054 aaKnown RBP5.69□□□□□ -1.5
USP44-201ENST00000258499 MPRIPQ6WCQ1 1025 aa5.69□□□□□ -1.5
USP44-201ENST00000258499 USP48Q86UV5 1035 aa5.69□□□□□ -1.5
USP44-201ENST00000258499 KIF1BPQ96EK5 621 aa5.69□□□□□ -1.5
USP44-201ENST00000258499 CNPY2Q9Y2B0 182 aa5.69□□□□□ -1.5
USP44-201ENST00000258499 EDC4Q6P2E9 1401 aaKnown RBP5.69□□□□□ -1.5
USP44-201ENST00000258499 ATP8B2P98198 1209 aa5.69□□□□□ -1.5
USP44-201ENST00000258499 CAMK4Q16566 473 aa5.69□□□□□ -1.5
USP44-201ENST00000258499 RIC3Q7Z5B4 369 aa5.69□□□□□ -1.5
USP44-201ENST00000258499 RHPN1Q8TCX5 695 aa5.69□□□□□ -1.5
USP44-201ENST00000258499 GPT2Q8TD30 523 aa5.69□□□□□ -1.5
USP44-201ENST00000258499 CYP46A1Q9Y6A2 500 aa5.69□□□□□ -1.5
USP44-201ENST00000258499 FAM135BQ49AJ0 1406 aa5.69□□□□□ -1.5
USP44-201ENST00000258499 METP08581 1390 aa5.69□□□□□ -1.5
USP44-201ENST00000258499 ESCO1Q5FWF5 840 aa5.69□□□□□ -1.5
USP44-201ENST00000258499 LARP1BQ659C4 914 aaKnown RBP5.69□□□□□ -1.5
USP44-201ENST00000258499 NECAB1Q8N987 351 aa5.69□□□□□ -1.5
USP44-201ENST00000258499 FAM184AQ8NB25 1140 aa5.69□□□□□ -1.5
USP44-201ENST00000258499 CHMP4AQ9BY43 222 aa5.69□□□□□ -1.5
USP44-201ENST00000258499 CCDC8Q9H0W5 538 aaPredicted RBP5.69□□□□□ -1.5
USP44-201ENST00000258499 PDRG1Q9NUG6 133 aa5.69□□□□□ -1.5
USP44-201ENST00000258499 NSFL1CQ9UNZ2 370 aaKnown RBP5.69□□□□□ -1.5
USP44-201ENST00000258499 ADGRB3O60242 1522 aa5.68□□□□□ -1.5
USP44-201ENST00000258499 BTBD11A6QL63 1104 aa5.68□□□□□ -1.5
USP44-201ENST00000258499 GOLGA6L6A8MZA4 724 aa5.68□□□□□ -1.5
USP44-201ENST00000258499 GADD45BO75293 160 aaPredicted RBP5.68□□□□□ -1.5
USP44-201ENST00000258499 GIMAP6Q6P9H5 292 aa5.68□□□□□ -1.5
USP44-201ENST00000258499 UNC5CLQ8IV45 518 aa5.68□□□□□ -1.5
USP44-201ENST00000258499 BOLA2Q9H3K6 86 aa5.68□□□□□ -1.5
USP44-201ENST00000258499 CHPF2Q9P2E5 772 aa5.68□□□□□ -1.5
USP44-201ENST00000258499 ABCC3O15438 1527 aa5.68□□□□□ -1.5
USP44-201ENST00000258499 GLI2P10070 1586 aa5.68□□□□□ -1.5
USP44-201ENST00000258499 PPFIA3O75145 1194 aa5.68□□□□□ -1.5
USP44-201ENST00000258499 MYL6BP14649 208 aa5.68□□□□□ -1.5
USP44-201ENST00000258499 ZNF445P59923 1031 aa5.68□□□□□ -1.5
USP44-201ENST00000258499 NEXNQ0ZGT2 675 aa5.68□□□□□ -1.5
USP44-201ENST00000258499 DNAAF4Q8WXU2 420 aa5.68□□□□□ -1.5
USP44-201ENST00000258499 ZNF592Q92610 1267 aa5.68□□□□□ -1.5
USP44-201ENST00000258499 TTC12Q9H892 705 aaPredicted RBP5.68□□□□□ -1.5
USP44-201ENST00000258499 PA2G4Q9UQ80 394 aaKnown RBP5.68□□□□□ -1.5
USP44-201ENST00000258499 HDAC5Q9UQL6 1122 aa5.68□□□□□ -1.5
USP44-201ENST00000258499 PPRC1Q5VV67 1664 aaKnown RBP5.68□□□□□ -1.5
USP44-201ENST00000258499 PNPLA6Q8IY17 1366 aa5.68□□□□□ -1.5
USP44-201ENST00000258499 CEP152O94986 1710 aa5.68□□□□□ -1.5
USP44-201ENST00000258499 STX6O43752 255 aa5.68□□□□□ -1.5
USP44-201ENST00000258499 DNAJC2Q99543 621 aaKnown RBP5.68□□□□□ -1.5
USP44-201ENST00000258499 LIMCH1Q9UPQ0 1083 aa5.68□□□□□ -1.5
USP44-201ENST00000258499 MLH3Q9UHC1 1453 aa5.68□□□□□ -1.5
USP44-201ENST00000258499 QRICH2Q9H0J4 1663 aa5.68□□□□□ -1.5
USP44-201ENST00000258499 PRR36Q9H6K5 1346 aa5.68□□□□□ -1.5
USP44-201ENST00000258499 PIK3R4Q99570 1358 aa5.67□□□□□ -1.5
USP44-201ENST00000258499 RAB11FIP3O75154 756 aa5.67□□□□□ -1.5
USP44-201ENST00000258499 OFD1O75665 1012 aa5.67□□□□□ -1.5
USP44-201ENST00000258499 GLRX3O76003 335 aaKnown RBP5.67□□□□□ -1.5
USP44-201ENST00000258499 TRHP20396 242 aaPredicted RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms