RNA–Protein interactions for RNA: ENST00000256996.8

DDB2-201, Transcript of damage specific DNA binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB2, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-201ENST00000256996 ZNF428Q96B54 188 aa15.75■□□□□ 0.11
DDB2-201ENST00000256996 BABAM1Q9NWV8 329 aa15.75■□□□□ 0.11
DDB2-201ENST00000256996 TSPYL4Q9UJ04 414 aa15.75■□□□□ 0.11
DDB2-201ENST00000256996 RNMTO43148 476 aaKnown RBP15.74■□□□□ 0.11
DDB2-201ENST00000256996 VAMP4O75379 141 aa15.74■□□□□ 0.11
DDB2-201ENST00000256996 PHKG2P15735 406 aa15.74■□□□□ 0.11
DDB2-201ENST00000256996 C8orf34Q49A92 452 aa15.74■□□□□ 0.11
DDB2-201ENST00000256996 IFNL2Q8IZJ0 200 aa15.74■□□□□ 0.11
DDB2-201ENST00000256996 C8orf58Q8NAV2 365 aa15.74■□□□□ 0.11
DDB2-201ENST00000256996 FRAT1Q92837 279 aaPredicted RBP15.74■□□□□ 0.11
DDB2-201ENST00000256996 CYP27B1O15528 508 aa15.74■□□□□ 0.11
DDB2-201ENST00000256996 TWISTNBQ3B726 338 aaPredicted RBP15.74■□□□□ 0.11
DDB2-201ENST00000256996 LRRC37A3O60309 1634 aa15.73■□□□□ 0.11
DDB2-201ENST00000256996 SPATA31A6Q5VVP1 1343 aa15.73■□□□□ 0.11
DDB2-201ENST00000256996 FAM161AQ3B820 660 aa15.73■□□□□ 0.11
DDB2-201ENST00000256996 ZCRB1Q8TBF4 217 aaKnown RBP15.73■□□□□ 0.11
DDB2-201ENST00000256996 SSH1Q8WYL5 1049 aa15.73■□□□□ 0.11
DDB2-201ENST00000256996 BCL2L13Q9BXK5 485 aa15.73■□□□□ 0.11
DDB2-201ENST00000256996 ELL2O00472 640 aaPredicted RBP15.72■□□□□ 0.11
DDB2-201ENST00000256996 ALDH1L2Q3SY69 923 aa15.72■□□□□ 0.11
DDB2-201ENST00000256996 TEFQ10587 303 aa15.71■□□□□ 0.11
DDB2-201ENST00000256996 SLIT2O94813 1529 aa15.71■□□□□ 0.11
DDB2-201ENST00000256996 KRT24Q2M2I5 525 aa15.71■□□□□ 0.11
DDB2-201ENST00000256996 SMC4Q9NTJ3 1288 aa15.71■□□□□ 0.11
DDB2-201ENST00000256996 PCDH11XQ9BZA7 1347 aa15.7■□□□□ 0.1
DDB2-201ENST00000256996 PCDH11YQ9BZA8 1340 aa15.7■□□□□ 0.1
DDB2-201ENST00000256996 HSP90AB1P08238 724 aaKnown RBP15.7■□□□□ 0.1
DDB2-201ENST00000256996 DCAF5Q96JK2 942 aa15.7■□□□□ 0.1
DDB2-201ENST00000256996 KDM6AO15550 1401 aaPredicted RBP15.69■□□□□ 0.1
DDB2-201ENST00000256996 RRP9O43818 475 aaKnown RBP15.69■□□□□ 0.1
DDB2-201ENST00000256996 SLC4A3P48751 1232 aa15.69■□□□□ 0.1
DDB2-201ENST00000256996 BRPF1P55201 1214 aaPredicted RBP15.69■□□□□ 0.1
DDB2-201ENST00000256996 PKD1L3Q7Z443 1732 aa15.69■□□□□ 0.1
DDB2-201ENST00000256996 BTBD11A6QL63 1104 aa15.68■□□□□ 0.1
DDB2-201ENST00000256996 PDE3AQ14432 1141 aa15.68■□□□□ 0.1
DDB2-201ENST00000256996 NGLY1Q96IV0 654 aa15.68■□□□□ 0.1
DDB2-201ENST00000256996 C8orf37Q96NL8 207 aa15.68■□□□□ 0.1
DDB2-201ENST00000256996 DISP2A7MBM2 1401 aa15.68■□□□□ 0.1
DDB2-201ENST00000256996 SPATA31A1Q5TZJ5 1347 aa15.68■□□□□ 0.1
DDB2-201ENST00000256996 CANXP27824 592 aaKnown RBP15.67■□□□□ 0.1
DDB2-201ENST00000256996 UPF1Q92900 1129 aaKnown RBP eCLIP15.67■□□□□ 0.1
DDB2-201ENST00000256996 SLC52A2Q9HAB3 445 aa15.67■□□□□ 0.1
DDB2-201ENST00000256996 ADAMTS7Q9UKP4 1686 aa15.67■□□□□ 0.1
DDB2-201ENST00000256996 PARP4Q9UKK3 1724 aaKnown RBP15.67■□□□□ 0.1
DDB2-201ENST00000256996 PLCH1Q4KWH8 1693 aa15.67■□□□□ 0.1
DDB2-201ENST00000256996 NKX1-1Q15270 411 aaPredicted RBP15.67■□□□□ 0.1
DDB2-201ENST00000256996 UNC5CLQ8IV45 518 aa15.67■□□□□ 0.1
DDB2-201ENST00000256996 FNBP4Q8N3X1 1017 aaPredicted RBP15.67■□□□□ 0.1
DDB2-201ENST00000256996 THRAP3Q9Y2W1 955 aaKnown RBP15.67■□□□□ 0.1
DDB2-201ENST00000256996 DDX54Q8TDD1 881 aaKnown RBP15.66■□□□□ 0.1
DDB2-201ENST00000256996 SPATA31A5Q5VU36 1347 aa15.66■□□□□ 0.1
DDB2-201ENST00000256996 SPATA31A7Q8IWB4 1347 aa15.66■□□□□ 0.1
DDB2-201ENST00000256996 KIF16BQ96L93 1317 aa15.66■□□□□ 0.1
DDB2-201ENST00000256996 LRP6O75581 1613 aa15.65■□□□□ 0.1
DDB2-201ENST00000256996 ZKSCAN2Q63HK3 967 aa15.65■□□□□ 0.1
DDB2-201ENST00000256996 NFATC2IPQ8NCF5 419 aa15.65■□□□□ 0.1
DDB2-201ENST00000256996 SOS1Q07889 1333 aaPredicted RBP15.65■□□□□ 0.1
DDB2-201ENST00000256996 BCL9LQ86UU0 1499 aa15.65■□□□□ 0.1
DDB2-201ENST00000256996 EIF4A1P60842 406 aaKnown RBP15.65■□□□□ 0.1
DDB2-201ENST00000256996 MRPL50Q8N5N7 158 aaKnown RBP15.65■□□□□ 0.1
DDB2-201ENST00000256996 CDCA7Q9BWT1 371 aaPredicted RBP15.65■□□□□ 0.1
DDB2-201ENST00000256996 NOB1Q9ULX3 412 aaKnown RBP15.65■□□□□ 0.1
DDB2-201ENST00000256996 NRAPQ86VF7 1730 aa15.64■□□□□ 0.09
DDB2-201ENST00000256996 NWD2Q9ULI1 1742 aa15.64■□□□□ 0.09
DDB2-201ENST00000256996 IPO8O15397 1037 aaKnown RBP15.63■□□□□ 0.09
DDB2-201ENST00000256996 KCNQ3O43525 872 aa15.63■□□□□ 0.09
DDB2-201ENST00000256996 ATF7IPQ6VMQ6 1270 aa15.63■□□□□ 0.09
DDB2-201ENST00000256996 ERVV-2B6SEH9 535 aa15.63■□□□□ 0.09
DDB2-201ENST00000256996 EXOC5O00471 708 aa15.63■□□□□ 0.09
DDB2-201ENST00000256996 TRIM27P14373 513 aa15.63■□□□□ 0.09
DDB2-201ENST00000256996 PANK1Q8TE04 598 aa15.63■□□□□ 0.09
DDB2-201ENST00000256996 MRC1P22897 1456 aa15.62■□□□□ 0.09
DDB2-201ENST00000256996 RLBP1P12271 317 aa15.62■□□□□ 0.09
DDB2-201ENST00000256996 CABP4P57796 275 aa15.62■□□□□ 0.09
DDB2-201ENST00000256996 VPS72Q15906 364 aa15.62■□□□□ 0.09
DDB2-201ENST00000256996 BARGINQ6ZT62 677 aa15.62■□□□□ 0.09
DDB2-201ENST00000256996 ARHGAP45Q92619 1136 aa15.62■□□□□ 0.09
DDB2-201ENST00000256996 TNNQ9UQP3 1299 aa15.62■□□□□ 0.09
DDB2-201ENST00000256996 CCDC9Q9Y3X0 531 aaKnown RBP15.62■□□□□ 0.09
DDB2-201ENST00000256996 ZNF790Q6PG37 636 aa15.61■□□□□ 0.09
DDB2-201ENST00000256996 CLUAP1Q96AJ1 413 aa15.61■□□□□ 0.09
DDB2-201ENST00000256996 HOXB7P09629 217 aa15.61■□□□□ 0.09
DDB2-201ENST00000256996 RGS3P49796 1198 aa15.61■□□□□ 0.09
DDB2-201ENST00000256996 DZIP1LQ8IYY4 767 aaKnown RBP15.61■□□□□ 0.09
DDB2-201ENST00000256996 USP21Q9UK80 565 aa15.61■□□□□ 0.09
DDB2-201ENST00000256996 HEG1Q9ULI3 1381 aa15.61■□□□□ 0.09
DDB2-201ENST00000256996 MEX3CQ5U5Q3 659 aaKnown RBP15.6■□□□□ 0.09
DDB2-201ENST00000256996 CCDC30Q5VVM6 783 aa15.6■□□□□ 0.09
DDB2-201ENST00000256996 FTSJ3Q8IY81 847 aaKnown RBP15.6■□□□□ 0.09
DDB2-201ENST00000256996 SCN11AQ9UI33 1791 aa15.6■□□□□ 0.09
DDB2-201ENST00000256996 SLC4A2P04920 1241 aa15.59■□□□□ 0.09
DDB2-201ENST00000256996 HSP90AA1P07900 732 aaKnown RBP15.59■□□□□ 0.09
DDB2-201ENST00000256996 SLC39A6Q13433 755 aa15.59■□□□□ 0.09
DDB2-201ENST00000256996 COG6Q9Y2V7 657 aa15.59■□□□□ 0.09
DDB2-201ENST00000256996 KDM3BQ7LBC6 1761 aa15.59■□□□□ 0.09
DDB2-201ENST00000256996 GIGYF1O75420 1035 aaPredicted RBP15.59■□□□□ 0.09
DDB2-201ENST00000256996 IGHDP01880 384 aa15.59■□□□□ 0.09
DDB2-201ENST00000256996 HSP90AA2PQ14568 343 aaPredicted RBP15.59■□□□□ 0.09
DDB2-201ENST00000256996 CHMP4AQ9BY43 222 aa15.59■□□□□ 0.09
DDB2-201ENST00000256996 TNS2Q63HR2 1409 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 164.2 ms