RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 SBNO1A3KN83 1393 aa17.92■□□□□ 0.46
UBE4B-201ENST00000253251 TPM3P06753 285 aa17.92■□□□□ 0.46
UBE4B-201ENST00000253251 A0A087WZG4 1122 aa17.92■□□□□ 0.46
UBE4B-201ENST00000253251 GCP02774 474 aa17.92■□□□□ 0.46
UBE4B-201ENST00000253251 K7ELQ4 463 aaPredicted RBP17.91■□□□□ 0.46
UBE4B-201ENST00000253251 ZPR1O75312 459 aa17.91■□□□□ 0.46
UBE4B-201ENST00000253251 TPM1P09493 284 aa17.91■□□□□ 0.46
UBE4B-201ENST00000253251 HDAC1Q13547 482 aaPredicted RBP17.91■□□□□ 0.46
UBE4B-201ENST00000253251 ALDH1L1O75891 902 aa17.91■□□□□ 0.46
UBE4B-201ENST00000253251 ANKRD20A12PQ8NF67 263 aa17.91■□□□□ 0.46
UBE4B-201ENST00000253251 SPATA31E1Q6ZUB1 1445 aa17.9■□□□□ 0.46
UBE4B-201ENST00000253251 FAM83GA6ND36 823 aa17.9■□□□□ 0.46
UBE4B-201ENST00000253251 FOXD4L6Q3SYB3 417 aaPredicted RBP17.9■□□□□ 0.46
UBE4B-201ENST00000253251 FOXD4L3Q6VB84 417 aaPredicted RBP17.9■□□□□ 0.46
UBE4B-201ENST00000253251 LETM1O95202 739 aaPredicted RBP17.9■□□□□ 0.46
UBE4B-201ENST00000253251 IFIT1P09914 478 aaKnown RBP17.9■□□□□ 0.46
UBE4B-201ENST00000253251 IFIT5Q13325 482 aaKnown RBP17.9■□□□□ 0.46
UBE4B-201ENST00000253251 METTL24Q5JXM2 366 aa17.9■□□□□ 0.46
UBE4B-201ENST00000253251 BLOC1S2Q6QNY1 142 aa17.9■□□□□ 0.46
UBE4B-201ENST00000253251 LRRFIP2Q9Y608 721 aaKnown RBP17.9■□□□□ 0.46
UBE4B-201ENST00000253251 MAP3K5Q99683 1374 aa17.9■□□□□ 0.46
UBE4B-201ENST00000253251 CHRNA2Q15822 529 aa17.9■□□□□ 0.46
UBE4B-201ENST00000253251 EFCAB6Q5THR3 1501 aa17.89■□□□□ 0.45
UBE4B-201ENST00000253251 F6X3S4 739 aa17.89■□□□□ 0.45
UBE4B-201ENST00000253251 MAP3K19Q56UN5 1328 aa17.89■□□□□ 0.45
UBE4B-201ENST00000253251 TSR1Q2NL82 804 aaKnown RBP17.89■□□□□ 0.45
UBE4B-201ENST00000253251 SHROOM2Q13796 1616 aa17.89■□□□□ 0.45
UBE4B-201ENST00000253251 HOXC9P31274 260 aa17.88■□□□□ 0.45
UBE4B-201ENST00000253251 LRRC59Q96AG4 307 aaKnown RBP17.88■□□□□ 0.45
UBE4B-201ENST00000253251 ZNF396Q96N95 335 aaPredicted RBP17.88■□□□□ 0.45
UBE4B-201ENST00000253251 RAD21O60216 631 aa17.88■□□□□ 0.45
UBE4B-201ENST00000253251 CWC25Q9NXE8 425 aaPredicted RBP17.88■□□□□ 0.45
UBE4B-201ENST00000253251 MAP3K2Q9Y2U5 619 aa17.88■□□□□ 0.45
UBE4B-201ENST00000253251 FKBP4Q02790 459 aaKnown RBP eCLIP17.88■□□□□ 0.45
UBE4B-201ENST00000253251 SASS6Q6UVJ0 657 aa17.88■□□□□ 0.45
UBE4B-201ENST00000253251 SMARCC1Q92922 1105 aaPredicted RBP17.88■□□□□ 0.45
UBE4B-201ENST00000253251 TCEAL9Q9UHQ7 104 aa17.88■□□□□ 0.45
UBE4B-201ENST00000253251 PLEKHG1Q9ULL1 1385 aa17.87■□□□□ 0.45
UBE4B-201ENST00000253251 WDR33Q9C0J8 1336 aaKnown RBP17.87■□□□□ 0.45
UBE4B-201ENST00000253251 RSPH6AQ9H0K4 717 aa17.87■□□□□ 0.45
UBE4B-201ENST00000253251 ZRANB1Q9UGI0 708 aa17.87■□□□□ 0.45
UBE4B-201ENST00000253251 NFKBIBQ15653 356 aa17.87■□□□□ 0.45
UBE4B-201ENST00000253251 ANKRD18BA2A2Z9 1011 aa17.86■□□□□ 0.45
UBE4B-201ENST00000253251 MTHFSDQ2M296 383 aaKnown RBP17.86■□□□□ 0.45
UBE4B-201ENST00000253251 MRPL50Q8N5N7 158 aaKnown RBP17.86■□□□□ 0.45
UBE4B-201ENST00000253251 EYA1Q99502 592 aa17.86■□□□□ 0.45
UBE4B-201ENST00000253251 IL2RBP14784 551 aa17.86■□□□□ 0.45
UBE4B-201ENST00000253251 BMP2KLQ5H9B9 411 aa17.86■□□□□ 0.45
UBE4B-201ENST00000253251 TRMT112Q9UI30 125 aaKnown RBP17.86■□□□□ 0.45
UBE4B-201ENST00000253251 NLRP1Q9C000 1473 aa17.86■□□□□ 0.45
UBE4B-201ENST00000253251 CDKL5O76039 1030 aa17.86■□□□□ 0.45
UBE4B-201ENST00000253251 FBLN1P23142 703 aa17.86■□□□□ 0.45
UBE4B-201ENST00000253251 ARHGAP31Q2M1Z3 1444 aa17.86■□□□□ 0.45
UBE4B-201ENST00000253251 PI4KAP2A4QPH2 592 aa17.86■□□□□ 0.45
UBE4B-201ENST00000253251 TRIM22Q8IYM9 498 aa17.86■□□□□ 0.45
UBE4B-201ENST00000253251 PI4KAP1Q8N8J0 262 aa17.86■□□□□ 0.45
UBE4B-201ENST00000253251 DCAF5Q96JK2 942 aa17.86■□□□□ 0.45
UBE4B-201ENST00000253251 ANKRD13DQ6ZTN6 518 aa17.85■□□□□ 0.45
UBE4B-201ENST00000253251 NUTM1Q86Y26 1132 aa17.85■□□□□ 0.45
UBE4B-201ENST00000253251 CAVIN4Q5BKX8 364 aa17.84■□□□□ 0.45
UBE4B-201ENST00000253251 JMYQ8N9B5 988 aa17.84■□□□□ 0.45
UBE4B-201ENST00000253251 KDM5AP29375 1690 aaKnown RBP17.84■□□□□ 0.45
UBE4B-201ENST00000253251 CWC27Q6UX04 472 aaKnown RBP17.84■□□□□ 0.45
UBE4B-201ENST00000253251 CDCA7Q9BWT1 371 aaPredicted RBP17.84■□□□□ 0.45
UBE4B-201ENST00000253251 ARHGEF10O15013 1369 aa17.84■□□□□ 0.45
UBE4B-201ENST00000253251 ECHDC1Q9NTX5 307 aa17.83■□□□□ 0.45
UBE4B-201ENST00000253251 PDRG1Q9NUG6 133 aa17.83■□□□□ 0.45
UBE4B-201ENST00000253251 U3KPZ7 1027 aaPredicted RBP17.83■□□□□ 0.45
UBE4B-201ENST00000253251 SLC5A1P13866 664 aa17.83■□□□□ 0.45
UBE4B-201ENST00000253251 IL13P35225 146 aa17.83■□□□□ 0.45
UBE4B-201ENST00000253251 PPP1R42Q7Z4L9 355 aa17.83■□□□□ 0.45
UBE4B-201ENST00000253251 NAT10Q9H0A0 1025 aaKnown RBP17.83■□□□□ 0.45
UBE4B-201ENST00000253251 RTN4Q9NQC3 1192 aaKnown RBP17.83■□□□□ 0.45
UBE4B-201ENST00000253251 LRP2BPQ9P2M1 347 aa17.83■□□□□ 0.45
UBE4B-201ENST00000253251 TET3O43151 1660 aa17.83■□□□□ 0.45
UBE4B-201ENST00000253251 HOXB7P09629 217 aa17.83■□□□□ 0.44
UBE4B-201ENST00000253251 IMMTQ16891 758 aaKnown RBP17.83■□□□□ 0.44
UBE4B-201ENST00000253251 KSR2Q6VAB6 950 aa17.83■□□□□ 0.44
UBE4B-201ENST00000253251 ERVK-7P63135 1459 aa17.82■□□□□ 0.44
UBE4B-201ENST00000253251 UBAP1LF5GYI3 381 aa17.82■□□□□ 0.44
UBE4B-201ENST00000253251 EVI5LQ96CN4 794 aa17.82■□□□□ 0.44
UBE4B-201ENST00000253251 RAI14Q9P0K7 980 aa17.82■□□□□ 0.44
UBE4B-201ENST00000253251 VAMP4O75379 141 aa17.82■□□□□ 0.44
UBE4B-201ENST00000253251 CREBRFQ8IUR6 639 aa17.82■□□□□ 0.44
UBE4B-201ENST00000253251 ANKRD44Q8N8A2 993 aa17.82■□□□□ 0.44
UBE4B-201ENST00000253251 CDC5LQ99459 802 aaKnown RBP17.82■□□□□ 0.44
UBE4B-201ENST00000253251 CDC42BPAQ5VT25 1732 aa17.81■□□□□ 0.44
UBE4B-201ENST00000253251 ERCC6L2Q5T890 1561 aa17.81■□□□□ 0.44
UBE4B-201ENST00000253251 RRP12Q5JTH9 1297 aaKnown RBP17.81■□□□□ 0.44
UBE4B-201ENST00000253251 AIDAQ96BJ3 306 aa17.81■□□□□ 0.44
UBE4B-201ENST00000253251 CCDC69A6NI79 296 aa17.81■□□□□ 0.44
UBE4B-201ENST00000253251 MAP4K4O95819 1239 aaPredicted RBP17.81■□□□□ 0.44
UBE4B-201ENST00000253251 HSPA2P54652 639 aa17.81■□□□□ 0.44
UBE4B-201ENST00000253251 C8orf58Q8NAV2 365 aa17.81■□□□□ 0.44
UBE4B-201ENST00000253251 JAKMIP1Q96N16 626 aaKnown RBP17.81■□□□□ 0.44
UBE4B-201ENST00000253251 HMGB1P09429 215 aaKnown RBP17.81■□□□□ 0.44
UBE4B-201ENST00000253251 ZNF287Q9HBT7 754 aa17.81■□□□□ 0.44
UBE4B-201ENST00000253251 PCDH11XQ9BZA7 1347 aa17.81■□□□□ 0.44
UBE4B-201ENST00000253251 PCDH11YQ9BZA8 1340 aa17.81■□□□□ 0.44
UBE4B-201ENST00000253251 KDM6BO15054 1643 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms