RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 MRC1P22897 1456 aa24.8■■□□□ 1.56
SBDS-201ENST00000246868 SIPA1L3O60292 1781 aaPredicted RBP24.8■■□□□ 1.56
SBDS-201ENST00000246868 THSD7AQ9UPZ6 1657 aa24.8■■□□□ 1.56
SBDS-201ENST00000246868 NFATC2IPQ8NCF5 419 aa24.79■■□□□ 1.56
SBDS-201ENST00000246868 ONECUT3O60422 494 aaPredicted RBP24.78■■□□□ 1.56
SBDS-201ENST00000246868 MARCH10Q8NA82 808 aaPredicted RBP24.76■■□□□ 1.55
SBDS-201ENST00000246868 KDM3BQ7LBC6 1761 aa24.76■■□□□ 1.55
SBDS-201ENST00000246868 KAT6BQ8WYB5 2073 aa24.76■■□□□ 1.55
SBDS-201ENST00000246868 RBM6P78332 1123 aaKnown RBP24.75■■□□□ 1.55
SBDS-201ENST00000246868 SUPT16HQ9Y5B9 1047 aaKnown RBP24.75■■□□□ 1.55
SBDS-201ENST00000246868 TWISTNBQ3B726 338 aaPredicted RBP24.74■■□□□ 1.55
SBDS-201ENST00000246868 SEPT12Q8IYM1 358 aa24.74■■□□□ 1.55
SBDS-201ENST00000246868 ZNF428Q96B54 188 aa24.74■■□□□ 1.55
SBDS-201ENST00000246868 TMOD3Q9NYL9 352 aa24.74■■□□□ 1.55
SBDS-201ENST00000246868 C8orf58Q8NAV2 365 aa24.73■■□□□ 1.55
SBDS-201ENST00000246868 TOGARAM1Q9Y4F4 1720 aa24.73■■□□□ 1.55
SBDS-201ENST00000246868 TTC5Q8N0Z6 440 aa24.72■■□□□ 1.55
SBDS-201ENST00000246868 ELL2O00472 640 aaPredicted RBP24.72■■□□□ 1.55
SBDS-201ENST00000246868 SOS1Q07889 1333 aaPredicted RBP24.71■■□□□ 1.55
SBDS-201ENST00000246868 ZNF790Q6PG37 636 aa24.71■■□□□ 1.55
SBDS-201ENST00000246868 TSPYL6Q8N831 410 aa24.71■■□□□ 1.55
SBDS-201ENST00000246868 RARSP54136 660 aaKnown RBP24.7■■□□□ 1.54
SBDS-201ENST00000246868 EIF4A1P60842 406 aaKnown RBP24.7■■□□□ 1.54
SBDS-201ENST00000246868 VAMP4O75379 141 aa24.69■■□□□ 1.54
SBDS-201ENST00000246868 ITGB4P16144 1822 aa24.69■■□□□ 1.54
SBDS-201ENST00000246868 DOT1LQ8TEK3 1739 aa24.69■■□□□ 1.54
SBDS-201ENST00000246868 KRT24Q2M2I5 525 aa24.68■■□□□ 1.54
SBDS-201ENST00000246868 SYTL4Q96C24 671 aaPredicted RBP24.68■■□□□ 1.54
SBDS-201ENST00000246868 KCNQ3O43525 872 aa24.68■■□□□ 1.54
SBDS-201ENST00000246868 RXRBP28702 533 aa24.68■■□□□ 1.54
SBDS-201ENST00000246868 SLC39A6Q13433 755 aa24.68■■□□□ 1.54
SBDS-201ENST00000246868 CHMP4AQ9BY43 222 aa24.68■■□□□ 1.54
SBDS-201ENST00000246868 PRIM1P49642 420 aaKnown RBP24.67■■□□□ 1.54
SBDS-201ENST00000246868 ALDH1L2Q3SY69 923 aa24.67■■□□□ 1.54
SBDS-201ENST00000246868 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.66■■□□□ 1.54
SBDS-201ENST00000246868 PIGBQ92521 554 aa24.66■■□□□ 1.54
SBDS-201ENST00000246868 SMC4Q9NTJ3 1288 aa24.66■■□□□ 1.54
SBDS-201ENST00000246868 BCL9O00512 1426 aa24.66■■□□□ 1.54
SBDS-201ENST00000246868 NEFLP07196 543 aa24.65■■□□□ 1.54
SBDS-201ENST00000246868 HOXB7P09629 217 aa24.65■■□□□ 1.54
SBDS-201ENST00000246868 FMNL2Q96PY5 1086 aa24.64■■□□□ 1.54
SBDS-201ENST00000246868 BCAR3O75815 825 aa24.64■■□□□ 1.53
SBDS-201ENST00000246868 RRP1P56182 461 aaKnown RBP24.64■■□□□ 1.53
SBDS-201ENST00000246868 ACSBG1Q96GR2 724 aa24.64■■□□□ 1.53
SBDS-201ENST00000246868 RNF123Q5XPI4 1314 aa24.64■■□□□ 1.53
SBDS-201ENST00000246868 ILDR1Q86SU0 546 aaPredicted RBP24.63■■□□□ 1.53
SBDS-201ENST00000246868 SSH1Q8WYL5 1049 aa24.63■■□□□ 1.53
SBDS-201ENST00000246868 RGS17Q9UGC6 210 aaPredicted RBP24.63■■□□□ 1.53
SBDS-201ENST00000246868 PAPPAQ13219 1627 aa24.62■■□□□ 1.53
SBDS-201ENST00000246868 BCL2L13Q9BXK5 485 aa24.62■■□□□ 1.53
SBDS-201ENST00000246868 KRT27Q7Z3Y8 459 aa24.61■■□□□ 1.53
SBDS-201ENST00000246868 ZNF496Q96IT1 587 aaPredicted RBP24.61■■□□□ 1.53
SBDS-201ENST00000246868 HEG1Q9ULI3 1381 aa24.61■■□□□ 1.53
SBDS-201ENST00000246868 GIGYF1O75420 1035 aaPredicted RBP24.61■■□□□ 1.53
SBDS-201ENST00000246868 CANXP27824 592 aaKnown RBP24.61■■□□□ 1.53
SBDS-201ENST00000246868 CCDC30Q5VVM6 783 aa24.61■■□□□ 1.53
SBDS-201ENST00000246868 STK31Q9BXU1 1019 aa24.6■■□□□ 1.53
SBDS-201ENST00000246868 BRWD3Q6RI45 1802 aa24.6■■□□□ 1.53
SBDS-201ENST00000246868 UBR2Q8IWV8 1755 aa24.6■■□□□ 1.53
SBDS-201ENST00000246868 SNRPA1P09661 255 aaKnown RBP24.59■■□□□ 1.53
SBDS-201ENST00000246868 HDGFL1Q5TGJ6 251 aa24.59■■□□□ 1.53
SBDS-201ENST00000246868 KIF16BQ96L93 1317 aa24.58■■□□□ 1.53
SBDS-201ENST00000246868 POTEAQ6S8J7 498 aa24.58■■□□□ 1.53
SBDS-201ENST00000246868 ASAP1Q9ULH1 1129 aa24.58■■□□□ 1.53
SBDS-201ENST00000246868 BRPF1P55201 1214 aaPredicted RBP24.57■■□□□ 1.52
SBDS-201ENST00000246868 FAM182BQ5T319 152 aa24.57■■□□□ 1.52
SBDS-201ENST00000246868 FRAT1Q92837 279 aaPredicted RBP24.57■■□□□ 1.52
SBDS-201ENST00000246868 ATG3Q9NT62 314 aa24.57■■□□□ 1.52
SBDS-201ENST00000246868 PTCD1O75127 700 aaKnown RBP24.57■■□□□ 1.52
SBDS-201ENST00000246868 EIF2S2P20042 333 aaKnown RBP24.57■■□□□ 1.52
SBDS-201ENST00000246868 KCPQ6ZWJ8 1503 aa24.56■■□□□ 1.52
SBDS-201ENST00000246868 TCERG1O14776 1098 aaKnown RBP24.56■■□□□ 1.52
SBDS-201ENST00000246868 FAM196AQ6ZSG2 479 aa24.56■■□□□ 1.52
SBDS-201ENST00000246868 CACNA1FO60840 1977 aa24.55■■□□□ 1.52
SBDS-201ENST00000246868 IPO8O15397 1037 aaKnown RBP24.55■■□□□ 1.52
SBDS-201ENST00000246868 PLIN1O60240 522 aa24.55■■□□□ 1.52
SBDS-201ENST00000246868 MRPL50Q8N5N7 158 aaKnown RBP24.55■■□□□ 1.52
SBDS-201ENST00000246868 SMARCC1Q92922 1105 aaPredicted RBP24.55■■□□□ 1.52
SBDS-201ENST00000246868 NHSQ6T4R5 1651 aa24.55■■□□□ 1.52
SBDS-201ENST00000246868 KCNQ2O43526 872 aa24.54■■□□□ 1.52
SBDS-201ENST00000246868 NECTIN2Q92692 538 aa24.54■■□□□ 1.52
SBDS-201ENST00000246868 VSIG10Q8N0Z9 540 aa24.53■■□□□ 1.52
SBDS-201ENST00000246868 RGS12O14924 1447 aa24.53■■□□□ 1.52
SBDS-201ENST00000246868 SLC4A2P04920 1241 aa24.53■■□□□ 1.52
SBDS-201ENST00000246868 ZKSCAN2Q63HK3 967 aa24.53■■□□□ 1.52
SBDS-201ENST00000246868 RBM42Q9BTD8 480 aaKnown RBP24.53■■□□□ 1.52
SBDS-201ENST00000246868 SBF2Q86WG5 1849 aa24.52■■□□□ 1.52
SBDS-201ENST00000246868 C5P01031 1676 aa24.52■■□□□ 1.52
SBDS-201ENST00000246868 PRAMEF22A3QJZ6 481 aa24.51■■□□□ 1.51
SBDS-201ENST00000246868 MS4A1P11836 297 aa24.51■■□□□ 1.51
SBDS-201ENST00000246868 TEX13AQ9BXU3 409 aaPredicted RBP24.51■■□□□ 1.51
SBDS-201ENST00000246868 NOB1Q9ULX3 412 aaKnown RBP24.51■■□□□ 1.51
SBDS-201ENST00000246868 DBF4Q9UBU7 674 aaPredicted RBP24.5■■□□□ 1.51
SBDS-201ENST00000246868 LAMB4A4D0S4 1761 aa24.5■■□□□ 1.51
SBDS-201ENST00000246868 IRX6P78412 446 aaPredicted RBP24.5■■□□□ 1.51
SBDS-201ENST00000246868 PALLDQ8WX93 1383 aa24.49■■□□□ 1.51
SBDS-201ENST00000246868 ARHGAP45Q92619 1136 aa24.49■■□□□ 1.51
SBDS-201ENST00000246868 BTAF1O14981 1849 aa24.48■■□□□ 1.51
SBDS-201ENST00000246868 FKBP8Q14318 412 aa24.48■■□□□ 1.51
SBDS-201ENST00000246868 PDE3AQ14432 1141 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms