RNA–Protein interactions for RNA: ENST00000243563.7

SNRPA-201, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-201ENST00000243563 BTAF1O14981 1849 aa26.34■■□□□ 1.81
SNRPA-201ENST00000243563 BCL9O00512 1426 aa26.34■■□□□ 1.81
SNRPA-201ENST00000243563 LAS1LQ9Y4W2 734 aaKnown RBP26.34■■□□□ 1.81
SNRPA-201ENST00000243563 ZNF853P0CG23 659 aa26.33■■□□□ 1.81
SNRPA-201ENST00000243563 PRIM1P49642 420 aaKnown RBP26.33■■□□□ 1.81
SNRPA-201ENST00000243563 GOLGA2Q08379 1002 aa26.33■■□□□ 1.81
SNRPA-201ENST00000243563 ERVV-2B6SEH9 535 aa26.32■■□□□ 1.8
SNRPA-201ENST00000243563 CABP4P57796 275 aa26.32■■□□□ 1.8
SNRPA-201ENST00000243563 TEFQ10587 303 aa26.32■■□□□ 1.8
SNRPA-201ENST00000243563 TSR2Q969E8 191 aaKnown RBP26.32■■□□□ 1.8
SNRPA-201ENST00000243563 UBR2Q8IWV8 1755 aa26.32■■□□□ 1.8
SNRPA-201ENST00000243563 IL16Q14005 1332 aa26.31■■□□□ 1.8
SNRPA-201ENST00000243563 KCNQ3O43525 872 aa26.31■■□□□ 1.8
SNRPA-201ENST00000243563 SLFN5Q08AF3 891 aa26.31■■□□□ 1.8
SNRPA-201ENST00000243563 PIGBQ92521 554 aa26.31■■□□□ 1.8
SNRPA-201ENST00000243563 TAF7Q15545 349 aaPredicted RBP26.3■■□□□ 1.8
SNRPA-201ENST00000243563 SYTL4Q96C24 671 aaPredicted RBP26.3■■□□□ 1.8
SNRPA-201ENST00000243563 IFT57Q9NWB7 429 aa26.3■■□□□ 1.8
SNRPA-201ENST00000243563 CHL1O00533 1208 aa26.29■■□□□ 1.8
SNRPA-201ENST00000243563 CFAP44Q96MT7 982 aa26.29■■□□□ 1.8
SNRPA-201ENST00000243563 MBIPQ9NS73 344 aa26.29■■□□□ 1.8
SNRPA-201ENST00000243563 SLC39A6Q13433 755 aa26.28■■□□□ 1.8
SNRPA-201ENST00000243563 FANCIQ9NVI1 1328 aa26.28■■□□□ 1.8
SNRPA-201ENST00000243563 TRMT2AQ8IZ69 625 aaKnown RBP26.28■■□□□ 1.8
SNRPA-201ENST00000243563 TMOD3Q9NYL9 352 aa26.28■■□□□ 1.8
SNRPA-201ENST00000243563 CALD1Q05682 793 aaKnown RBP26.27■■□□□ 1.8
SNRPA-201ENST00000243563 TNS1Q9HBL0 1735 aaKnown RBP26.27■■□□□ 1.8
SNRPA-201ENST00000243563 BTBD11A6QL63 1104 aa26.26■■□□□ 1.79
SNRPA-201ENST00000243563 GNAI1P63096 354 aa26.26■■□□□ 1.79
SNRPA-201ENST00000243563 DUSP27Q5VZP5 1158 aa26.26■■□□□ 1.79
SNRPA-201ENST00000243563 KCPQ6ZWJ8 1503 aa26.26■■□□□ 1.79
SNRPA-201ENST00000243563 C5P01031 1676 aa26.25■■□□□ 1.79
SNRPA-201ENST00000243563 TSPYL4Q9UJ04 414 aa26.25■■□□□ 1.79
SNRPA-201ENST00000243563 E9PSI1 815 aa26.25■■□□□ 1.79
SNRPA-201ENST00000243563 KRT24Q2M2I5 525 aa26.25■■□□□ 1.79
SNRPA-201ENST00000243563 FAM196AQ6ZSG2 479 aa26.25■■□□□ 1.79
SNRPA-201ENST00000243563 ASAP1Q9ULH1 1129 aa26.24■■□□□ 1.79
SNRPA-201ENST00000243563 TRIM37O94972 964 aa26.21■■□□□ 1.79
SNRPA-201ENST00000243563 ATG3Q9NT62 314 aa26.21■■□□□ 1.79
SNRPA-201ENST00000243563 ZNF790Q6PG37 636 aa26.21■■□□□ 1.79
SNRPA-201ENST00000243563 MYH16Q9H6N6 1097 aa26.2■■□□□ 1.78
SNRPA-201ENST00000243563 LY75O60449 1722 aa26.2■■□□□ 1.78
SNRPA-201ENST00000243563 TJP1Q07157 1748 aa26.18■■□□□ 1.78
SNRPA-201ENST00000243563 EIF4A1P60842 406 aaKnown RBP26.18■■□□□ 1.78
SNRPA-201ENST00000243563 EXOSC9Q06265 439 aaKnown RBP26.18■■□□□ 1.78
SNRPA-201ENST00000243563 BABAM1Q9NWV8 329 aa26.18■■□□□ 1.78
SNRPA-201ENST00000243563 TSPYL6Q8N831 410 aa26.17■■□□□ 1.78
SNRPA-201ENST00000243563 C8orf58Q8NAV2 365 aa26.17■■□□□ 1.78
SNRPA-201ENST00000243563 ZNF496Q96IT1 587 aaPredicted RBP26.17■■□□□ 1.78
SNRPA-201ENST00000243563 BCL11BQ9C0K0 894 aaPredicted RBP26.17■■□□□ 1.78
SNRPA-201ENST00000243563 PRAMEF22A3QJZ6 481 aa26.16■■□□□ 1.78
SNRPA-201ENST00000243563 HEG1Q9ULI3 1381 aa26.16■■□□□ 1.78
SNRPA-201ENST00000243563 LAMB4A4D0S4 1761 aa26.15■■□□□ 1.78
SNRPA-201ENST00000243563 ELL2O00472 640 aaPredicted RBP26.14■■□□□ 1.78
SNRPA-201ENST00000243563 PTCD1O75127 700 aaKnown RBP26.14■■□□□ 1.78
SNRPA-201ENST00000243563 SLC4A9Q96Q91 983 aa26.14■■□□□ 1.78
SNRPA-201ENST00000243563 PALLDQ8WX93 1383 aa26.13■■□□□ 1.77
SNRPA-201ENST00000243563 TTC5Q8N0Z6 440 aa26.13■■□□□ 1.77
SNRPA-201ENST00000243563 CICQ96RK0 1608 aaPredicted RBP26.11■■□□□ 1.77
SNRPA-201ENST00000243563 ZNF831Q5JPB2 1677 aa26.1■■□□□ 1.77
SNRPA-201ENST00000243563 TAF1LQ8IZX4 1826 aa26.1■■□□□ 1.77
SNRPA-201ENST00000243563 COL5A3P25940 1745 aaPredicted RBP26.1■■□□□ 1.77
SNRPA-201ENST00000243563 ILDR2Q71H61 639 aa26.1■■□□□ 1.77
SNRPA-201ENST00000243563 RBM42Q9BTD8 480 aaKnown RBP26.1■■□□□ 1.77
SNRPA-201ENST00000243563 FMNL2Q96PY5 1086 aa26.09■■□□□ 1.77
SNRPA-201ENST00000243563 GIGYF1O75420 1035 aaPredicted RBP26.08■■□□□ 1.77
SNRPA-201ENST00000243563 KCNQ4P56696 695 aa26.08■■□□□ 1.77
SNRPA-201ENST00000243563 VAMP4O75379 141 aa26.06■■□□□ 1.76
SNRPA-201ENST00000243563 TWISTNBQ3B726 338 aaPredicted RBP26.06■■□□□ 1.76
SNRPA-201ENST00000243563 RGPD3A6NKT7 1758 aaPredicted RBP26.06■■□□□ 1.76
SNRPA-201ENST00000243563 RGPD4Q7Z3J3 1758 aa26.06■■□□□ 1.76
SNRPA-201ENST00000243563 SMARCC1Q92922 1105 aaPredicted RBP26.05■■□□□ 1.76
SNRPA-201ENST00000243563 LOC102724428A0A0B4J2F2 783 aa26.04■■□□□ 1.76
SNRPA-201ENST00000243563 SIK1P57059 783 aa26.04■■□□□ 1.76
SNRPA-201ENST00000243563 ITPK1Q13572 414 aa26.04■■□□□ 1.76
SNRPA-201ENST00000243563 DNAJC10Q8IXB1 793 aa26.04■■□□□ 1.76
SNRPA-201ENST00000243563 NECTIN2Q92692 538 aa26.04■■□□□ 1.76
SNRPA-201ENST00000243563 USP16Q9Y5T5 823 aa26.04■■□□□ 1.76
SNRPA-201ENST00000243563 MYH14Q7Z406 1995 aaKnown RBP26.04■■□□□ 1.76
SNRPA-201ENST00000243563 TCERG1O14776 1098 aaKnown RBP26.03■■□□□ 1.76
SNRPA-201ENST00000243563 APBA3O96018 575 aa26.03■■□□□ 1.76
SNRPA-201ENST00000243563 SNRPA1P09661 255 aaKnown RBP26.02■■□□□ 1.76
SNRPA-201ENST00000243563 PROM2Q8N271 834 aa26.01■■□□□ 1.75
SNRPA-201ENST00000243563 RREB1Q92766 1687 aa26.01■■□□□ 1.75
SNRPA-201ENST00000243563 ATP6V1AP38606 617 aa26■■□□□ 1.75
SNRPA-201ENST00000243563 LRRC4BQ9NT99 713 aa26■■□□□ 1.75
SNRPA-201ENST00000243563 EIF2S2P20042 333 aaKnown RBP25.99■■□□□ 1.75
SNRPA-201ENST00000243563 VSIG10Q8N0Z9 540 aa25.99■■□□□ 1.75
SNRPA-201ENST00000243563 PIP4K2AP48426 406 aaPredicted RBP25.99■■□□□ 1.75
SNRPA-201ENST00000243563 LINC00116Q8NCU8 138 aa25.98■■□□□ 1.75
SNRPA-201ENST00000243563 BCL2L13Q9BXK5 485 aa25.98■■□□□ 1.75
SNRPA-201ENST00000243563 CCNL1Q9UK58 526 aaPredicted RBP25.98■■□□□ 1.75
SNRPA-201ENST00000243563 HOXB7P09629 217 aa25.97■■□□□ 1.75
SNRPA-201ENST00000243563 HDGFL1Q5TGJ6 251 aa25.97■■□□□ 1.75
SNRPA-201ENST00000243563 C4BP0C0L5 1744 aa25.97■■□□□ 1.75
SNRPA-201ENST00000243563 PLSCR1O15162 318 aa25.96■■□□□ 1.75
SNRPA-201ENST00000243563 CYP19A1P11511 503 aaPredicted RBP25.96■■□□□ 1.75
SNRPA-201ENST00000243563 RARSP54136 660 aaKnown RBP25.96■■□□□ 1.75
SNRPA-201ENST00000243563 ANXA1P04083 346 aa25.96■■□□□ 1.75
SNRPA-201ENST00000243563 EN1Q05925 392 aaPredicted RBP25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms