RNA–Protein interactions for RNA: ENST00000234256.3

SLC1A4-201, Transcript of solute carrier family 1 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC1A4, Length 4,561 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A4-201ENST00000234256 BRMS1Q9HCU9 246 aa20.27■□□□□ 0.84
SLC1A4-201ENST00000234256 NUCB1Q02818 461 aa20.27■□□□□ 0.83
SLC1A4-201ENST00000234256 USP25Q9UHP3 1055 aa20.27■□□□□ 0.83
SLC1A4-201ENST00000234256 DMRT2Q9Y5R5 561 aa20.27■□□□□ 0.83
SLC1A4-201ENST00000234256 TCOF1Q13428 1488 aaKnown RBP20.26■□□□□ 0.83
SLC1A4-201ENST00000234256 HDAC1Q13547 482 aaPredicted RBP20.26■□□□□ 0.83
SLC1A4-201ENST00000234256 ARGLU1Q9NWB6 273 aaPredicted RBP20.26■□□□□ 0.83
SLC1A4-201ENST00000234256 CKAP2LQ8IYA6 745 aa20.26■□□□□ 0.83
SLC1A4-201ENST00000234256 MAP7D2Q96T17 732 aa20.26■□□□□ 0.83
SLC1A4-201ENST00000234256 ACEP12821 1306 aa20.26■□□□□ 0.83
SLC1A4-201ENST00000234256 PHACTR3Q96KR7 559 aa20.25■□□□□ 0.83
SLC1A4-201ENST00000234256 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.25■□□□□ 0.83
SLC1A4-201ENST00000234256 PIBF1Q8WXW3 757 aa20.25■□□□□ 0.83
SLC1A4-201ENST00000234256 PHF8Q9UPP1 1060 aa20.25■□□□□ 0.83
SLC1A4-201ENST00000234256 KIF21AQ7Z4S6 1674 aa20.25■□□□□ 0.83
SLC1A4-201ENST00000234256 MAP3K11Q16584 847 aa20.24■□□□□ 0.83
SLC1A4-201ENST00000234256 TTC22Q5TAA0 569 aa20.24■□□□□ 0.83
SLC1A4-201ENST00000234256 TCEANC2Q96MN5 208 aa20.24■□□□□ 0.83
SLC1A4-201ENST00000234256 FANCAO15360 1455 aa20.24■□□□□ 0.83
SLC1A4-201ENST00000234256 JMYQ8N9B5 988 aa20.24■□□□□ 0.83
SLC1A4-201ENST00000234256 CFAP45Q9UL16 551 aa20.24■□□□□ 0.83
SLC1A4-201ENST00000234256 LARP1Q6PKG0 1096 aaKnown RBP20.24■□□□□ 0.83
SLC1A4-201ENST00000234256 CCDC82Q8N4S0 544 aa20.24■□□□□ 0.83
SLC1A4-201ENST00000234256 POLKQ9UBT6 870 aa20.24■□□□□ 0.83
SLC1A4-201ENST00000234256 KRT32Q14532 448 aa20.23■□□□□ 0.83
SLC1A4-201ENST00000234256 TEX35Q5T0J7 233 aa20.23■□□□□ 0.83
SLC1A4-201ENST00000234256 CCDC112Q8NEF3 446 aa20.23■□□□□ 0.83
SLC1A4-201ENST00000234256 LIMCH1Q9UPQ0 1083 aa20.23■□□□□ 0.83
SLC1A4-201ENST00000234256 TRIM22Q8IYM9 498 aa20.23■□□□□ 0.83
SLC1A4-201ENST00000234256 ATP5J2-PTCD1G3V325 749 aa20.22■□□□□ 0.83
SLC1A4-201ENST00000234256 KCNH5Q8NCM2 988 aa20.22■□□□□ 0.83
SLC1A4-201ENST00000234256 DBF4Q9UBU7 674 aaPredicted RBP20.22■□□□□ 0.83
SLC1A4-201ENST00000234256 ABCF2Q9UG63 623 aa20.22■□□□□ 0.83
SLC1A4-201ENST00000234256 OFD1O75665 1012 aa20.21■□□□□ 0.83
SLC1A4-201ENST00000234256 NCKAP5LQ9HCH0 1330 aa20.21■□□□□ 0.83
SLC1A4-201ENST00000234256 A0A087WZG4 1122 aa20.21■□□□□ 0.83
SLC1A4-201ENST00000234256 MTERF4Q7Z6M4 381 aaKnown RBP20.21■□□□□ 0.83
SLC1A4-201ENST00000234256 PTPRCP08575 1304 aa20.21■□□□□ 0.83
SLC1A4-201ENST00000234256 IL16Q14005 1332 aa20.21■□□□□ 0.83
SLC1A4-201ENST00000234256 XRCC6P12956 609 aaKnown RBP eCLIP20.2■□□□□ 0.83
SLC1A4-201ENST00000234256 CEP57L1Q8IYX8 460 aa20.2■□□□□ 0.83
SLC1A4-201ENST00000234256 ECHDC1Q9NTX5 307 aa20.2■□□□□ 0.83
SLC1A4-201ENST00000234256 WDR62O43379 1518 aa20.2■□□□□ 0.82
SLC1A4-201ENST00000234256 FAM135AQ9P2D6 1515 aa20.2■□□□□ 0.82
SLC1A4-201ENST00000234256 TDO2P48775 406 aa20.2■□□□□ 0.82
SLC1A4-201ENST00000234256 NACAP1Q9BZK3 213 aa20.2■□□□□ 0.82
SLC1A4-201ENST00000234256 SNRKQ9NRH2 765 aa20.2■□□□□ 0.82
SLC1A4-201ENST00000234256 CCT2P78371 535 aaKnown RBP20.2■□□□□ 0.82
SLC1A4-201ENST00000234256 CCDC69A6NI79 296 aa20.19■□□□□ 0.82
SLC1A4-201ENST00000234256 IKQ13123 557 aaPredicted RBP20.19■□□□□ 0.82
SLC1A4-201ENST00000234256 TMX3Q96JJ7 454 aa20.19■□□□□ 0.82
SLC1A4-201ENST00000234256 MAP3K2Q9Y2U5 619 aa20.19■□□□□ 0.82
SLC1A4-201ENST00000234256 ABCA5Q8WWZ7 1642 aa20.19■□□□□ 0.82
SLC1A4-201ENST00000234256 VAMP4O75379 141 aa20.19■□□□□ 0.82
SLC1A4-201ENST00000234256 HSP90B2PQ58FF3 399 aa20.19■□□□□ 0.82
SLC1A4-201ENST00000234256 CTNNA3Q9UI47 895 aa20.19■□□□□ 0.82
SLC1A4-201ENST00000234256 KIAA0556O60303 1618 aa20.19■□□□□ 0.82
SLC1A4-201ENST00000234256 METTL24Q5JXM2 366 aa20.19■□□□□ 0.82
SLC1A4-201ENST00000234256 TCEAL9Q9UHQ7 104 aa20.19■□□□□ 0.82
SLC1A4-201ENST00000234256 NUTM2BA6NNL0 878 aaPredicted RBP20.18■□□□□ 0.82
SLC1A4-201ENST00000234256 NUTM2EB1AL46 878 aaPredicted RBP20.18■□□□□ 0.82
SLC1A4-201ENST00000234256 IFIT1P09914 478 aaKnown RBP20.18■□□□□ 0.82
SLC1A4-201ENST00000234256 NUTM2AQ8IVF1 878 aaPredicted RBP20.18■□□□□ 0.82
SLC1A4-201ENST00000234256 ZBTB3Q9H5J0 574 aa20.18■□□□□ 0.82
SLC1A4-201ENST00000234256 PDE1AP54750 535 aa20.18■□□□□ 0.82
SLC1A4-201ENST00000234256 ASXL1Q8IXJ9 1541 aa20.18■□□□□ 0.82
SLC1A4-201ENST00000234256 NSD2O96028 1365 aa20.18■□□□□ 0.82
SLC1A4-201ENST00000234256 ATP2B2Q01814 1243 aa20.18■□□□□ 0.82
SLC1A4-201ENST00000234256 FILIP1LQ4L180 1135 aa20.18■□□□□ 0.82
SLC1A4-201ENST00000234256 UBE3BQ7Z3V4 1068 aa20.18■□□□□ 0.82
SLC1A4-201ENST00000234256 LRP2BPQ9P2M1 347 aa20.17■□□□□ 0.82
SLC1A4-201ENST00000234256 ITSN2Q9NZM3 1697 aa20.17■□□□□ 0.82
SLC1A4-201ENST00000234256 BICDL1Q6ZP65 573 aa20.17■□□□□ 0.82
SLC1A4-201ENST00000234256 MRPL50Q8N5N7 158 aaKnown RBP20.17■□□□□ 0.82
SLC1A4-201ENST00000234256 ANKRD44Q8N8A2 993 aa20.17■□□□□ 0.82
SLC1A4-201ENST00000234256 TRAPPC8Q9Y2L5 1435 aa20.17■□□□□ 0.82
SLC1A4-201ENST00000234256 NECAB1Q8N987 351 aa20.17■□□□□ 0.82
SLC1A4-201ENST00000234256 ARHGAP45Q92619 1136 aa20.17■□□□□ 0.82
SLC1A4-201ENST00000234256 KDM5BQ9UGL1 1544 aa20.17■□□□□ 0.82
SLC1A4-201ENST00000234256 RHPN1Q8TCX5 695 aa20.17■□□□□ 0.82
SLC1A4-201ENST00000234256 ANKRD36BQ8N2N9 1353 aa20.16■□□□□ 0.82
SLC1A4-201ENST00000234256 SKIDA1Q1XH10 827 aa20.16■□□□□ 0.82
SLC1A4-201ENST00000234256 CCDC183Q5T5S1 534 aa20.16■□□□□ 0.82
SLC1A4-201ENST00000234256 ZBTB40Q9NUA8 1239 aa20.16■□□□□ 0.82
SLC1A4-201ENST00000234256 U3KPZ7 1027 aaPredicted RBP20.16■□□□□ 0.82
SLC1A4-201ENST00000234256 STX6O43752 255 aa20.15■□□□□ 0.82
SLC1A4-201ENST00000234256 IMMTQ16891 758 aaKnown RBP20.15■□□□□ 0.82
SLC1A4-201ENST00000234256 RAB11FIP4Q86YS3 637 aa20.15■□□□□ 0.82
SLC1A4-201ENST00000234256 KLHL40Q2TBA0 621 aa20.15■□□□□ 0.82
SLC1A4-201ENST00000234256 SCAND2PQ9GZW5 306 aaPredicted RBP20.15■□□□□ 0.82
SLC1A4-201ENST00000234256 RAI14Q9P0K7 980 aa20.15■□□□□ 0.82
SLC1A4-201ENST00000234256 HCLS1P14317 486 aaPredicted RBP20.15■□□□□ 0.82
SLC1A4-201ENST00000234256 CAGE1Q8TC20 777 aa20.15■□□□□ 0.82
SLC1A4-201ENST00000234256 UBAC1Q9BSL1 405 aa20.15■□□□□ 0.82
SLC1A4-201ENST00000234256 POLR3AO14802 1390 aaPredicted RBP20.15■□□□□ 0.82
SLC1A4-201ENST00000234256 GJB2P29033 226 aa20.14■□□□□ 0.82
SLC1A4-201ENST00000234256 EIF4A2Q14240 407 aaKnown RBP20.14■□□□□ 0.82
SLC1A4-201ENST00000234256 AIDAQ96BJ3 306 aa20.14■□□□□ 0.81
SLC1A4-201ENST00000234256 AMOTQ4VCS5 1084 aa20.14■□□□□ 0.81
SLC1A4-201ENST00000234256 SMC5Q8IY18 1101 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms