RNA–Protein interactions for RNA: ENST00000231526.8

TRAPPC13-201, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TRAPPC13, Length 2,715 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-201ENST00000231526 SBNO1A3KN83 1393 aa6.92□□□□□ -1.3
TRAPPC13-201ENST00000231526 FLT4P35916 1363 aa6.92□□□□□ -1.3
TRAPPC13-201ENST00000231526 TMCO4Q5TGY1 634 aa6.92□□□□□ -1.3
TRAPPC13-201ENST00000231526 BCL2L13Q9BXK5 485 aa6.92□□□□□ -1.3
TRAPPC13-201ENST00000231526 CC2D2BQ6DHV5 1058 aa6.92□□□□□ -1.3
TRAPPC13-201ENST00000231526 NLRP7Q8WX94 980 aa6.92□□□□□ -1.3
TRAPPC13-201ENST00000231526 FRAT1Q92837 279 aaPredicted RBP6.92□□□□□ -1.3
TRAPPC13-201ENST00000231526 LTV1Q96GA3 475 aaPredicted RBP6.92□□□□□ -1.3
TRAPPC13-201ENST00000231526 CRBNQ96SW2 442 aa6.92□□□□□ -1.3
TRAPPC13-201ENST00000231526 PIK3C2AO00443 1686 aa6.91□□□□□ -1.3
TRAPPC13-201ENST00000231526 FANCIQ9NVI1 1328 aa6.91□□□□□ -1.3
TRAPPC13-201ENST00000231526 PSEN1P49768 467 aa6.91□□□□□ -1.3
TRAPPC13-201ENST00000231526 ZNF526Q8TF50 670 aaPredicted RBP6.91□□□□□ -1.3
TRAPPC13-201ENST00000231526 THUMPD2Q9BTF0 503 aaKnown RBP6.91□□□□□ -1.3
TRAPPC13-201ENST00000231526 NWD1Q149M9 1564 aa6.91□□□□□ -1.3
TRAPPC13-201ENST00000231526 ANP32EQ9BTT0 268 aa6.91□□□□□ -1.3
TRAPPC13-201ENST00000231526 HOXC9P31274 260 aa6.9□□□□□ -1.3
TRAPPC13-201ENST00000231526 RARSP54136 660 aaKnown RBP6.9□□□□□ -1.3
TRAPPC13-201ENST00000231526 EXOSC9Q06265 439 aaKnown RBP6.9□□□□□ -1.3
TRAPPC13-201ENST00000231526 LMOD3Q0VAK6 560 aa6.9□□□□□ -1.3
TRAPPC13-201ENST00000231526 KRT28Q7Z3Y7 464 aa6.9□□□□□ -1.3
TRAPPC13-201ENST00000231526 FAM83GA6ND36 823 aa6.9□□□□□ -1.31
TRAPPC13-201ENST00000231526 MAP3K13O43283 966 aa6.9□□□□□ -1.31
TRAPPC13-201ENST00000231526 CALD1Q05682 793 aaKnown RBP6.9□□□□□ -1.31
TRAPPC13-201ENST00000231526 DCTN1Q14203 1278 aa6.9□□□□□ -1.31
TRAPPC13-201ENST00000231526 KCNH5Q8NCM2 988 aa6.9□□□□□ -1.31
TRAPPC13-201ENST00000231526 EYA1Q99502 592 aa6.9□□□□□ -1.31
TRAPPC13-201ENST00000231526 PRDM10Q9NQV6 1147 aa6.9□□□□□ -1.31
TRAPPC13-201ENST00000231526 C1orf167Q5SNV9 1468 aa6.9□□□□□ -1.31
TRAPPC13-201ENST00000231526 IL16Q14005 1332 aa6.89□□□□□ -1.31
TRAPPC13-201ENST00000231526 DPYSL4O14531 572 aa6.89□□□□□ -1.31
TRAPPC13-201ENST00000231526 CCDC82Q8N4S0 544 aa6.89□□□□□ -1.31
TRAPPC13-201ENST00000231526 DDX17Q92841 729 aaKnown RBP6.89□□□□□ -1.31
TRAPPC13-201ENST00000231526 LMTK3Q96Q04 1460 aa6.89□□□□□ -1.31
TRAPPC13-201ENST00000231526 MSH6P52701 1360 aa6.89□□□□□ -1.31
TRAPPC13-201ENST00000231526 PEAK1Q9H792 1746 aa6.89□□□□□ -1.31
TRAPPC13-201ENST00000231526 GCP02774 474 aa6.89□□□□□ -1.31
TRAPPC13-201ENST00000231526 ARHGEF1Q92888 912 aaKnown RBP6.89□□□□□ -1.31
TRAPPC13-201ENST00000231526 CT47B1P0C2W7 299 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC13-201ENST00000231526 GNAI1P63096 354 aa6.88□□□□□ -1.31
TRAPPC13-201ENST00000231526 KRI1Q8N9T8 703 aaKnown RBP6.88□□□□□ -1.31
TRAPPC13-201ENST00000231526 SMC4Q9NTJ3 1288 aa6.88□□□□□ -1.31
TRAPPC13-201ENST00000231526 ZNF335Q9H4Z2 1342 aaPredicted RBP6.88□□□□□ -1.31
TRAPPC13-201ENST00000231526 KIF24Q5T7B8 1368 aa6.88□□□□□ -1.31
TRAPPC13-201ENST00000231526 STRCP1A6NGW2 1772 aa6.88□□□□□ -1.31
TRAPPC13-201ENST00000231526 DLG5Q8TDM6 1919 aa6.87□□□□□ -1.31
TRAPPC13-201ENST00000231526 ELL2O00472 640 aaPredicted RBP6.87□□□□□ -1.31
TRAPPC13-201ENST00000231526 PDE3AQ14432 1141 aa6.87□□□□□ -1.31
TRAPPC13-201ENST00000231526 MCM10Q7L590 875 aa6.87□□□□□ -1.31
TRAPPC13-201ENST00000231526 PANK1Q8TE04 598 aa6.87□□□□□ -1.31
TRAPPC13-201ENST00000231526 RTF1Q92541 710 aaKnown RBP6.87□□□□□ -1.31
TRAPPC13-201ENST00000231526 COG6Q9Y2V7 657 aa6.87□□□□□ -1.31
TRAPPC13-201ENST00000231526 ARHGEF10O15013 1369 aa6.87□□□□□ -1.31
TRAPPC13-201ENST00000231526 NPHP3Q7Z494 1330 aa6.87□□□□□ -1.31
TRAPPC13-201ENST00000231526 IGSF1Q8N6C5 1336 aa6.87□□□□□ -1.31
TRAPPC13-201ENST00000231526 MST1RQ04912 1400 aa6.87□□□□□ -1.31
TRAPPC13-201ENST00000231526 PDE4DQ08499 809 aa6.87□□□□□ -1.31
TRAPPC13-201ENST00000231526 USHBP1Q8N6Y0 703 aa6.87□□□□□ -1.31
TRAPPC13-201ENST00000231526 IP6K1Q92551 441 aa6.87□□□□□ -1.31
TRAPPC13-201ENST00000231526 EMILIN3Q9NT22 766 aa6.87□□□□□ -1.31
TRAPPC13-201ENST00000231526 IFT57Q9NWB7 429 aa6.87□□□□□ -1.31
TRAPPC13-201ENST00000231526 DCCP43146 1447 aa6.87□□□□□ -1.31
TRAPPC13-201ENST00000231526 NCOA3Q9Y6Q9 1424 aa6.87□□□□□ -1.31
TRAPPC13-201ENST00000231526 ZC3H6P61129 1189 aaKnown RBP6.86□□□□□ -1.31
TRAPPC13-201ENST00000231526 MTHFSDQ2M296 383 aaKnown RBP6.86□□□□□ -1.31
TRAPPC13-201ENST00000231526 FTSJ3Q8IY81 847 aaKnown RBP6.86□□□□□ -1.31
TRAPPC13-201ENST00000231526 SSH1Q8WYL5 1049 aa6.86□□□□□ -1.31
TRAPPC13-201ENST00000231526 GZF1Q9H116 711 aaPredicted RBP6.86□□□□□ -1.31
TRAPPC13-201ENST00000231526 MBIPQ9NS73 344 aa6.86□□□□□ -1.31
TRAPPC13-201ENST00000231526 KDRP35968 1356 aa6.86□□□□□ -1.31
TRAPPC13-201ENST00000231526 GAS2L2Q8NHY3 880 aa6.86□□□□□ -1.31
TRAPPC13-201ENST00000231526 STRCQ7RTU9 1775 aa6.86□□□□□ -1.31
TRAPPC13-201ENST00000231526 RTL1A6NKG5 1358 aa6.86□□□□□ -1.31
TRAPPC13-201ENST00000231526 TRIM66O15016 1216 aa6.85□□□□□ -1.31
TRAPPC13-201ENST00000231526 CHRM1P11229 460 aaPredicted RBP6.85□□□□□ -1.31
TRAPPC13-201ENST00000231526 NCLP19338 710 aaKnown RBP6.85□□□□□ -1.31
TRAPPC13-201ENST00000231526 PDAP1Q13442 181 aaKnown RBP6.85□□□□□ -1.31
TRAPPC13-201ENST00000231526 ZKSCAN2Q63HK3 967 aa6.85□□□□□ -1.31
TRAPPC13-201ENST00000231526 BARGINQ6ZT62 677 aa6.85□□□□□ -1.31
TRAPPC13-201ENST00000231526 ARHGEF25Q86VW2 580 aa6.85□□□□□ -1.31
TRAPPC13-201ENST00000231526 MARF1Q9Y4F3 1742 aaKnown RBP6.85□□□□□ -1.31
TRAPPC13-201ENST00000231526 LTN1O94822 1766 aa6.85□□□□□ -1.31
TRAPPC13-201ENST00000231526 KDM4AO75164 1064 aa6.85□□□□□ -1.31
TRAPPC13-201ENST00000231526 NBPF6Q5VWK0 638 aa6.85□□□□□ -1.31
TRAPPC13-201ENST00000231526 GPIHBP1Q8IV16 184 aa6.85□□□□□ -1.31
TRAPPC13-201ENST00000231526 TSPYL6Q8N831 410 aa6.85□□□□□ -1.31
TRAPPC13-201ENST00000231526 POM121Q96HA1 1249 aa6.85□□□□□ -1.31
TRAPPC13-201ENST00000231526 NBPF4Q96M43 638 aa6.85□□□□□ -1.31
TRAPPC13-201ENST00000231526 TRAIPQ9BWF2 469 aa6.85□□□□□ -1.31
TRAPPC13-201ENST00000231526 TNNQ9UQP3 1299 aa6.85□□□□□ -1.31
TRAPPC13-201ENST00000231526 TWISTNBQ3B726 338 aaPredicted RBP6.85□□□□□ -1.31
TRAPPC13-201ENST00000231526 CABLES1Q8TDN4 633 aa6.85□□□□□ -1.31
TRAPPC13-201ENST00000231526 LRRC59Q96AG4 307 aaKnown RBP6.85□□□□□ -1.31
TRAPPC13-201ENST00000231526 SLAIN2Q9P270 581 aa6.85□□□□□ -1.31
TRAPPC13-201ENST00000231526 KIF1AQ12756 1690 aa6.84□□□□□ -1.31
TRAPPC13-201ENST00000231526 TCERG1O14776 1098 aaKnown RBP6.84□□□□□ -1.31
TRAPPC13-201ENST00000231526 ZNF853P0CG23 659 aa6.84□□□□□ -1.31
TRAPPC13-201ENST00000231526 RGPD1P0DJD0 1748 aa6.84□□□□□ -1.31
TRAPPC13-201ENST00000231526 RLBP1P12271 317 aa6.84□□□□□ -1.31
TRAPPC13-201ENST00000231526 DPY19L2Q6NUT2 758 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms