RNA–Protein interactions for RNA: ENST00000228916.6

SCNN1A-201, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-201ENST00000228916 PALD1Q9ULE6 856 aa16.98■□□□□ 0.31
SCNN1A-201ENST00000228916 MCCP23508 829 aa16.97■□□□□ 0.31
SCNN1A-201ENST00000228916 TXNDC2Q86VQ3 553 aa16.97■□□□□ 0.31
SCNN1A-201ENST00000228916 METP08581 1390 aa16.97■□□□□ 0.31
SCNN1A-201ENST00000228916 SSH2Q76I76 1423 aa16.97■□□□□ 0.31
SCNN1A-201ENST00000228916 NRKQ7Z2Y5 1582 aa16.97■□□□□ 0.31
SCNN1A-201ENST00000228916 NRXN3Q9Y4C0 1643 aa16.97■□□□□ 0.31
SCNN1A-201ENST00000228916 C3P01024 1663 aa16.96■□□□□ 0.31
SCNN1A-201ENST00000228916 MCM10Q7L590 875 aa16.96■□□□□ 0.31
SCNN1A-201ENST00000228916 PIBF1Q8WXW3 757 aa16.96■□□□□ 0.31
SCNN1A-201ENST00000228916 GADD45BO75293 160 aaPredicted RBP16.96■□□□□ 0.31
SCNN1A-201ENST00000228916 SULT6B1Q6IMI4 303 aa16.96■□□□□ 0.31
SCNN1A-201ENST00000228916 PRIMPOLQ96LW4 560 aa16.96■□□□□ 0.31
SCNN1A-201ENST00000228916 TMEM87AQ8NBN3 555 aa16.95■□□□□ 0.3
SCNN1A-201ENST00000228916 CCDC61Q9Y6R9 512 aa16.95■□□□□ 0.3
SCNN1A-201ENST00000228916 EIF4A2Q14240 407 aaKnown RBP16.94■□□□□ 0.3
SCNN1A-201ENST00000228916 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.94■□□□□ 0.3
SCNN1A-201ENST00000228916 CCDC94Q9BW85 323 aaPredicted RBP16.94■□□□□ 0.3
SCNN1A-201ENST00000228916 WDR33Q9C0J8 1336 aaKnown RBP16.94■□□□□ 0.3
SCNN1A-201ENST00000228916 CHMLP26374 656 aa16.94■□□□□ 0.3
SCNN1A-201ENST00000228916 GTF2F1P35269 517 aaKnown RBP eCLIP16.94■□□□□ 0.3
SCNN1A-201ENST00000228916 USP48Q86UV5 1035 aa16.94■□□□□ 0.3
SCNN1A-201ENST00000228916 AKAP12Q02952 1782 aa16.94■□□□□ 0.3
SCNN1A-201ENST00000228916 SLC4A2P04920 1241 aa16.94■□□□□ 0.3
SCNN1A-201ENST00000228916 CCT4P50991 539 aaKnown RBP16.93■□□□□ 0.3
SCNN1A-201ENST00000228916 GDPD2Q9HCC8 539 aa16.93■□□□□ 0.3
SCNN1A-201ENST00000228916 HMGN5P82970 282 aaKnown RBP16.92■□□□□ 0.3
SCNN1A-201ENST00000228916 TSHZ3Q63HK5 1081 aa16.92■□□□□ 0.3
SCNN1A-201ENST00000228916 CRB1P82279 1406 aa16.92■□□□□ 0.3
SCNN1A-201ENST00000228916 PLEKHG5O94827 1062 aa16.92■□□□□ 0.3
SCNN1A-201ENST00000228916 MX1P20591 662 aa16.92■□□□□ 0.3
SCNN1A-201ENST00000228916 NOLC1Q14978 699 aaKnown RBP eCLIP16.92■□□□□ 0.3
SCNN1A-201ENST00000228916 ANO2Q9NQ90 1003 aa16.92■□□□□ 0.3
SCNN1A-201ENST00000228916 PRR36Q9H6K5 1346 aa16.92■□□□□ 0.3
SCNN1A-201ENST00000228916 SPATA31D1Q6ZQQ2 1576 aa16.92■□□□□ 0.3
SCNN1A-201ENST00000228916 TCHHQ07283 1943 aa16.92■□□□□ 0.3
SCNN1A-201ENST00000228916 EPB41L2O43491 1005 aaKnown RBP16.92■□□□□ 0.3
SCNN1A-201ENST00000228916 EXOC6BQ9Y2D4 811 aa16.92■□□□□ 0.3
SCNN1A-201ENST00000228916 ITSN1Q15811 1721 aa16.91■□□□□ 0.3
SCNN1A-201ENST00000228916 CCDC183Q5T5S1 534 aa16.91■□□□□ 0.3
SCNN1A-201ENST00000228916 NOL8Q76FK4 1167 aaKnown RBP16.91■□□□□ 0.3
SCNN1A-201ENST00000228916 LRRCC1Q9C099 1032 aa16.91■□□□□ 0.3
SCNN1A-201ENST00000228916 SPTLC3Q9NUV7 552 aa16.91■□□□□ 0.3
SCNN1A-201ENST00000228916 USP25Q9UHP3 1055 aa16.91■□□□□ 0.3
SCNN1A-201ENST00000228916 RPAP1Q9BWH6 1393 aaPredicted RBP16.91■□□□□ 0.3
SCNN1A-201ENST00000228916 GNAI2P04899 355 aa16.91■□□□□ 0.3
SCNN1A-201ENST00000228916 STAP2Q9UGK3 403 aa16.91■□□□□ 0.3
SCNN1A-201ENST00000228916 DNTTIP2Q5QJE6 756 aaKnown RBP16.9■□□□□ 0.3
SCNN1A-201ENST00000228916 G2E3Q7L622 706 aa16.9■□□□□ 0.3
SCNN1A-201ENST00000228916 ZNF710Q8N1W2 664 aa16.9■□□□□ 0.3
SCNN1A-201ENST00000228916 UPF3BQ9BZI7 483 aaKnown RBP16.9■□□□□ 0.3
SCNN1A-201ENST00000228916 MIS18AQ9NYP9 233 aa16.9■□□□□ 0.3
SCNN1A-201ENST00000228916 F6X3S4 739 aa16.89■□□□□ 0.29
SCNN1A-201ENST00000228916 LETM1O95202 739 aaPredicted RBP16.89■□□□□ 0.29
SCNN1A-201ENST00000228916 ADCY5O95622 1261 aa16.89■□□□□ 0.29
SCNN1A-201ENST00000228916 ZNF830Q96NB3 372 aaPredicted RBP16.89■□□□□ 0.29
SCNN1A-201ENST00000228916 ARID3AQ99856 593 aa16.89■□□□□ 0.29
SCNN1A-201ENST00000228916 SRCIN1Q9C0H9 1055 aa16.89■□□□□ 0.29
SCNN1A-201ENST00000228916 FOXD4L6Q3SYB3 417 aaPredicted RBP16.89■□□□□ 0.29
SCNN1A-201ENST00000228916 SLC4A10Q6U841 1118 aa16.89■□□□□ 0.29
SCNN1A-201ENST00000228916 FOXD4L3Q6VB84 417 aaPredicted RBP16.89■□□□□ 0.29
SCNN1A-201ENST00000228916 KLHL34Q8N239 644 aa16.89■□□□□ 0.29
SCNN1A-201ENST00000228916 FKBP5Q13451 457 aaPredicted RBP16.88■□□□□ 0.29
SCNN1A-201ENST00000228916 HSP90AB2PQ58FF8 381 aa16.88■□□□□ 0.29
SCNN1A-201ENST00000228916 ARHGEF10O15013 1369 aa16.88■□□□□ 0.29
SCNN1A-201ENST00000228916 TTC12Q9H892 705 aaPredicted RBP16.88■□□□□ 0.29
SCNN1A-201ENST00000228916 PEAK1Q9H792 1746 aa16.88■□□□□ 0.29
SCNN1A-201ENST00000228916 HSPA4P34932 840 aa16.87■□□□□ 0.29
SCNN1A-201ENST00000228916 RILPL2Q969X0 211 aa16.87■□□□□ 0.29
SCNN1A-201ENST00000228916 TRIM6-TRIM34B2RNG4 842 aa16.87■□□□□ 0.29
SCNN1A-201ENST00000228916 UTP14CQ5TAP6 766 aaKnown RBP16.87■□□□□ 0.29
SCNN1A-201ENST00000228916 JARID2Q92833 1246 aaPredicted RBP16.87■□□□□ 0.29
SCNN1A-201ENST00000228916 AOX1Q06278 1338 aa16.87■□□□□ 0.29
SCNN1A-201ENST00000228916 MPNDQ8N594 471 aa16.87■□□□□ 0.29
SCNN1A-201ENST00000228916 RGPD1P0DJD0 1748 aa16.86■□□□□ 0.29
SCNN1A-201ENST00000228916 HCLS1P14317 486 aaPredicted RBP16.86■□□□□ 0.29
SCNN1A-201ENST00000228916 MLECQ14165 292 aa16.86■□□□□ 0.29
SCNN1A-201ENST00000228916 UNC5CLQ8IV45 518 aa16.86■□□□□ 0.29
SCNN1A-201ENST00000228916 UBE2HP62256 183 aa16.86■□□□□ 0.29
SCNN1A-201ENST00000228916 ATP8B2P98198 1209 aa16.86■□□□□ 0.29
SCNN1A-201ENST00000228916 PNMA6EA0A0J9YXQ4 647 aa16.85■□□□□ 0.29
SCNN1A-201ENST00000228916 FOXO3O43524 673 aa16.85■□□□□ 0.29
SCNN1A-201ENST00000228916 KDM4AO75164 1064 aa16.85■□□□□ 0.29
SCNN1A-201ENST00000228916 IL25Q9H293 177 aa16.85■□□□□ 0.29
SCNN1A-201ENST00000228916 CNPY2Q9Y2B0 182 aa16.85■□□□□ 0.29
SCNN1A-201ENST00000228916 TTC21BQ7Z4L5 1316 aa16.85■□□□□ 0.29
SCNN1A-201ENST00000228916 DMTNQ08495 405 aa16.85■□□□□ 0.29
SCNN1A-201ENST00000228916 TSC1Q92574 1164 aa16.85■□□□□ 0.29
SCNN1A-201ENST00000228916 FUCA2Q9BTY2 467 aa16.85■□□□□ 0.29
SCNN1A-201ENST00000228916 TECPR2O15040 1411 aa16.85■□□□□ 0.29
SCNN1A-201ENST00000228916 GNAI3P08754 354 aa16.85■□□□□ 0.29
SCNN1A-201ENST00000228916 ZSCAN22P10073 491 aaPredicted RBP16.85■□□□□ 0.29
SCNN1A-201ENST00000228916 ZSCAN20P17040 1043 aaPredicted RBP16.85■□□□□ 0.29
SCNN1A-201ENST00000228916 OVOS2A0A0J9YW53 1432 aa16.84■□□□□ 0.29
SCNN1A-201ENST00000228916 OVOS2Q6IE36 1432 aa16.84■□□□□ 0.29
SCNN1A-201ENST00000228916 C17orf53Q8N3J3 647 aaPredicted RBP16.84■□□□□ 0.29
SCNN1A-201ENST00000228916 PPP6R1Q9UPN7 881 aa16.84■□□□□ 0.29
SCNN1A-201ENST00000228916 KIF3AQ9Y496 699 aa16.84■□□□□ 0.29
SCNN1A-201ENST00000228916 AGLP35573 1532 aa16.84■□□□□ 0.29
SCNN1A-201ENST00000228916 RIMS1Q86UR5 1692 aaKnown RBP16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms