RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 KDM3BQ7LBC6 1761 aa18.31■□□□□ 0.52
SEC61B-201ENST00000223641 DOT1LQ8TEK3 1739 aa18.31■□□□□ 0.52
SEC61B-201ENST00000223641 A0A0G2JS52 829 aa18.3■□□□□ 0.52
SEC61B-201ENST00000223641 MYT1Q01538 1121 aa18.3■□□□□ 0.52
SEC61B-201ENST00000223641 NFATC2IPQ8NCF5 419 aa18.29■□□□□ 0.52
SEC61B-201ENST00000223641 MYH16Q9H6N6 1097 aa18.29■□□□□ 0.52
SEC61B-201ENST00000223641 RGS12O14924 1447 aa18.29■□□□□ 0.52
SEC61B-201ENST00000223641 SBF2Q86WG5 1849 aa18.28■□□□□ 0.52
SEC61B-201ENST00000223641 MBIPQ9NS73 344 aa18.28■□□□□ 0.52
SEC61B-201ENST00000223641 PAPPAQ13219 1627 aa18.27■□□□□ 0.52
SEC61B-201ENST00000223641 FANCIQ9NVI1 1328 aa18.27■□□□□ 0.52
SEC61B-201ENST00000223641 KRT27Q7Z3Y8 459 aa18.27■□□□□ 0.52
SEC61B-201ENST00000223641 CABP4P57796 275 aa18.26■□□□□ 0.51
SEC61B-201ENST00000223641 TSR2Q969E8 191 aaKnown RBP18.26■□□□□ 0.51
SEC61B-201ENST00000223641 LAS1LQ9Y4W2 734 aaKnown RBP18.26■□□□□ 0.51
SEC61B-201ENST00000223641 BTBD11A6QL63 1104 aa18.25■□□□□ 0.51
SEC61B-201ENST00000223641 MIS18AQ9NYP9 233 aa18.25■□□□□ 0.51
SEC61B-201ENST00000223641 TSPYL4Q9UJ04 414 aa18.25■□□□□ 0.51
SEC61B-201ENST00000223641 NHSQ6T4R5 1651 aa18.25■□□□□ 0.51
SEC61B-201ENST00000223641 UBR2Q8IWV8 1755 aa18.25■□□□□ 0.51
SEC61B-201ENST00000223641 PIGBQ92521 554 aa18.24■□□□□ 0.51
SEC61B-201ENST00000223641 HEG1Q9ULI3 1381 aa18.23■□□□□ 0.51
SEC61B-201ENST00000223641 PRIM1P49642 420 aaKnown RBP18.23■□□□□ 0.51
SEC61B-201ENST00000223641 ZNF790Q6PG37 636 aa18.23■□□□□ 0.51
SEC61B-201ENST00000223641 TMOD3Q9NYL9 352 aa18.23■□□□□ 0.51
SEC61B-201ENST00000223641 KAT6BQ8WYB5 2073 aa18.22■□□□□ 0.51
SEC61B-201ENST00000223641 FAM182BQ5T319 152 aa18.22■□□□□ 0.51
SEC61B-201ENST00000223641 FAM196AQ6ZSG2 479 aa18.22■□□□□ 0.51
SEC61B-201ENST00000223641 KCNQ3O43525 872 aa18.21■□□□□ 0.51
SEC61B-201ENST00000223641 EIF4A1P60842 406 aaKnown RBP18.21■□□□□ 0.51
SEC61B-201ENST00000223641 EXOSC9Q06265 439 aaKnown RBP18.21■□□□□ 0.51
SEC61B-201ENST00000223641 KCNQ2O43526 872 aa18.2■□□□□ 0.5
SEC61B-201ENST00000223641 CT47B1P0C2W7 299 aaPredicted RBP18.2■□□□□ 0.5
SEC61B-201ENST00000223641 ACSBG1Q96GR2 724 aa18.2■□□□□ 0.5
SEC61B-201ENST00000223641 KCPQ6ZWJ8 1503 aa18.19■□□□□ 0.5
SEC61B-201ENST00000223641 CENPBP07199 599 aaPredicted RBP18.19■□□□□ 0.5
SEC61B-201ENST00000223641 SLC39A6Q13433 755 aa18.19■□□□□ 0.5
SEC61B-201ENST00000223641 ATG3Q9NT62 314 aa18.19■□□□□ 0.5
SEC61B-201ENST00000223641 C8orf58Q8NAV2 365 aa18.18■□□□□ 0.5
SEC61B-201ENST00000223641 BTAF1O14981 1849 aa18.18■□□□□ 0.5
SEC61B-201ENST00000223641 SOS1Q07889 1333 aaPredicted RBP18.18■□□□□ 0.5
SEC61B-201ENST00000223641 EP400Q96L91 3159 aa18.17■□□□□ 0.5
SEC61B-201ENST00000223641 VAMP4O75379 141 aa18.17■□□□□ 0.5
SEC61B-201ENST00000223641 KRT24Q2M2I5 525 aa18.17■□□□□ 0.5
SEC61B-201ENST00000223641 TSPYL6Q8N831 410 aa18.17■□□□□ 0.5
SEC61B-201ENST00000223641 SYTL4Q96C24 671 aaPredicted RBP18.17■□□□□ 0.5
SEC61B-201ENST00000223641 ASAP1Q9ULH1 1129 aa18.17■□□□□ 0.5
SEC61B-201ENST00000223641 HOXB7P09629 217 aa18.16■□□□□ 0.5
SEC61B-201ENST00000223641 ZNF496Q96IT1 587 aaPredicted RBP18.16■□□□□ 0.5
SEC61B-201ENST00000223641 BCL11BQ9C0K0 894 aaPredicted RBP18.16■□□□□ 0.5
SEC61B-201ENST00000223641 ZNF831Q5JPB2 1677 aa18.15■□□□□ 0.5
SEC61B-201ENST00000223641 GIGYF1O75420 1035 aaPredicted RBP18.15■□□□□ 0.5
SEC61B-201ENST00000223641 TWISTNBQ3B726 338 aaPredicted RBP18.15■□□□□ 0.5
SEC61B-201ENST00000223641 PTF1AQ7RTS3 328 aa18.15■□□□□ 0.5
SEC61B-201ENST00000223641 TTC5Q8N0Z6 440 aa18.15■□□□□ 0.5
SEC61B-201ENST00000223641 ZNF428Q96B54 188 aa18.15■□□□□ 0.5
SEC61B-201ENST00000223641 CICQ96RK0 1608 aaPredicted RBP18.15■□□□□ 0.5
SEC61B-201ENST00000223641 FMNL2Q96PY5 1086 aa18.14■□□□□ 0.49
SEC61B-201ENST00000223641 C5P01031 1676 aa18.14■□□□□ 0.49
SEC61B-201ENST00000223641 LY75O60449 1722 aa18.13■□□□□ 0.49
SEC61B-201ENST00000223641 VSIG10Q8N0Z9 540 aa18.13■□□□□ 0.49
SEC61B-201ENST00000223641 SMARCC1Q92922 1105 aaPredicted RBP18.13■□□□□ 0.49
SEC61B-201ENST00000223641 ELL2O00472 640 aaPredicted RBP18.12■□□□□ 0.49
SEC61B-201ENST00000223641 LAMB4A4D0S4 1761 aa18.12■□□□□ 0.49
SEC61B-201ENST00000223641 SNRPA1P09661 255 aaKnown RBP18.11■□□□□ 0.49
SEC61B-201ENST00000223641 SLC4A9Q96Q91 983 aa18.11■□□□□ 0.49
SEC61B-201ENST00000223641 TNS1Q9HBL0 1735 aaKnown RBP18.1■□□□□ 0.49
SEC61B-201ENST00000223641 PALLDQ8WX93 1383 aa18.1■□□□□ 0.49
SEC61B-201ENST00000223641 PTCD1O75127 700 aaKnown RBP18.1■□□□□ 0.49
SEC61B-201ENST00000223641 RARSP54136 660 aaKnown RBP18.1■□□□□ 0.49
SEC61B-201ENST00000223641 ALDH1L2Q3SY69 923 aa18.1■□□□□ 0.49
SEC61B-201ENST00000223641 RCAN3Q9UKA8 241 aa18.1■□□□□ 0.49
SEC61B-201ENST00000223641 CACNA1FO60840 1977 aa18.1■□□□□ 0.49
SEC61B-201ENST00000223641 TJP1Q07157 1748 aa18.09■□□□□ 0.49
SEC61B-201ENST00000223641 PRAMEF22A3QJZ6 481 aa18.09■□□□□ 0.49
SEC61B-201ENST00000223641 TRIM37O94972 964 aa18.09■□□□□ 0.49
SEC61B-201ENST00000223641 BRPF1P55201 1214 aaPredicted RBP18.08■□□□□ 0.48
SEC61B-201ENST00000223641 CHMP4AQ9BY43 222 aa18.08■□□□□ 0.48
SEC61B-201ENST00000223641 USP16Q9Y5T5 823 aa18.08■□□□□ 0.48
SEC61B-201ENST00000223641 LOC102724428A0A0B4J2F2 783 aa18.07■□□□□ 0.48
SEC61B-201ENST00000223641 SIK1P57059 783 aa18.07■□□□□ 0.48
SEC61B-201ENST00000223641 SSH1Q8WYL5 1049 aa18.07■□□□□ 0.48
SEC61B-201ENST00000223641 TEX13AQ9BXU3 409 aaPredicted RBP18.07■□□□□ 0.48
SEC61B-201ENST00000223641 PLSCR1O15162 318 aa18.06■□□□□ 0.48
SEC61B-201ENST00000223641 CCDC30Q5VVM6 783 aa18.06■□□□□ 0.48
SEC61B-201ENST00000223641 RBM42Q9BTD8 480 aaKnown RBP18.06■□□□□ 0.48
SEC61B-201ENST00000223641 RGPD3A6NKT7 1758 aaPredicted RBP18.06■□□□□ 0.48
SEC61B-201ENST00000223641 RGPD4Q7Z3J3 1758 aa18.06■□□□□ 0.48
SEC61B-201ENST00000223641 COL5A3P25940 1745 aaPredicted RBP18.06■□□□□ 0.48
SEC61B-201ENST00000223641 RNF123Q5XPI4 1314 aa18.05■□□□□ 0.48
SEC61B-201ENST00000223641 HDGFL1Q5TGJ6 251 aa18.05■□□□□ 0.48
SEC61B-201ENST00000223641 BCAR3O75815 825 aa18.04■□□□□ 0.48
SEC61B-201ENST00000223641 DNAJC10Q8IXB1 793 aa18.04■□□□□ 0.48
SEC61B-201ENST00000223641 MRPL50Q8N5N7 158 aaKnown RBP18.04■□□□□ 0.48
SEC61B-201ENST00000223641 TAF1LQ8IZX4 1826 aa18.04■□□□□ 0.48
SEC61B-201ENST00000223641 ERBB4Q15303 1308 aa18.03■□□□□ 0.48
SEC61B-201ENST00000223641 RREB1Q92766 1687 aa18.03■□□□□ 0.48
SEC61B-201ENST00000223641 EIF2S2P20042 333 aaKnown RBP18.03■□□□□ 0.48
SEC61B-201ENST00000223641 PDIA6Q15084 440 aa18.03■□□□□ 0.48
SEC61B-201ENST00000223641 CYP19A1P11511 503 aaPredicted RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms