RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 SF3B2Q13435 895 aaKnown RBP19.69■□□□□ 0.74
RPA3-201ENST00000223129 ASAP1Q9ULH1 1129 aa19.69■□□□□ 0.74
RPA3-201ENST00000223129 MRC1P22897 1456 aa19.68■□□□□ 0.74
RPA3-201ENST00000223129 DEFB132Q7Z7B7 95 aa19.68■□□□□ 0.74
RPA3-201ENST00000223129 CCDC125Q86Z20 511 aa19.68■□□□□ 0.74
RPA3-201ENST00000223129 MIS18AQ9NYP9 233 aa19.68■□□□□ 0.74
RPA3-201ENST00000223129 SLC39A6Q13433 755 aa19.67■□□□□ 0.74
RPA3-201ENST00000223129 WWC1Q8IX03 1113 aa19.67■□□□□ 0.74
RPA3-201ENST00000223129 ATG3Q9NT62 314 aa19.67■□□□□ 0.74
RPA3-201ENST00000223129 EN1Q05925 392 aaPredicted RBP19.66■□□□□ 0.74
RPA3-201ENST00000223129 SIPA1L3O60292 1781 aaPredicted RBP19.66■□□□□ 0.74
RPA3-201ENST00000223129 TAF7Q15545 349 aaPredicted RBP19.66■□□□□ 0.74
RPA3-201ENST00000223129 CCDC27Q2M243 656 aa19.66■□□□□ 0.74
RPA3-201ENST00000223129 BTBD11A6QL63 1104 aa19.65■□□□□ 0.74
RPA3-201ENST00000223129 BAG6P46379 1132 aa19.64■□□□□ 0.73
RPA3-201ENST00000223129 LAS1LQ9Y4W2 734 aaKnown RBP19.64■□□□□ 0.73
RPA3-201ENST00000223129 PLSCR1O15162 318 aa19.63■□□□□ 0.73
RPA3-201ENST00000223129 KCNQ3O43525 872 aa19.63■□□□□ 0.73
RPA3-201ENST00000223129 NCBP3Q53F19 620 aaKnown RBP19.63■□□□□ 0.73
RPA3-201ENST00000223129 PALLDQ8WX93 1383 aa19.63■□□□□ 0.73
RPA3-201ENST00000223129 EZH2Q15910 746 aaKnown RBP19.63■□□□□ 0.73
RPA3-201ENST00000223129 PTCD1O75127 700 aaKnown RBP19.62■□□□□ 0.73
RPA3-201ENST00000223129 KCNQ4P56696 695 aa19.62■□□□□ 0.73
RPA3-201ENST00000223129 HNRNPUQ00839 825 aaKnown RBP eCLIP19.62■□□□□ 0.73
RPA3-201ENST00000223129 CAMKK2Q96RR4 588 aa19.62■□□□□ 0.73
RPA3-201ENST00000223129 ZNF790Q6PG37 636 aa19.61■□□□□ 0.73
RPA3-201ENST00000223129 PROM2Q8N271 834 aa19.61■□□□□ 0.73
RPA3-201ENST00000223129 SMARCC1Q92922 1105 aaPredicted RBP19.61■□□□□ 0.73
RPA3-201ENST00000223129 SOCS7O14512 581 aa19.61■□□□□ 0.73
RPA3-201ENST00000223129 RBM42Q9BTD8 480 aaKnown RBP19.61■□□□□ 0.73
RPA3-201ENST00000223129 NGEFQ8N5V2 710 aa19.6■□□□□ 0.73
RPA3-201ENST00000223129 TXNRD1Q16881 649 aa19.59■□□□□ 0.73
RPA3-201ENST00000223129 TTC5Q8N0Z6 440 aa19.59■□□□□ 0.73
RPA3-201ENST00000223129 TSPYL4Q9UJ04 414 aa19.59■□□□□ 0.73
RPA3-201ENST00000223129 PAPPAQ13219 1627 aa19.59■□□□□ 0.73
RPA3-201ENST00000223129 ZNF521Q96K83 1311 aa19.58■□□□□ 0.73
RPA3-201ENST00000223129 CHL1O00533 1208 aa19.58■□□□□ 0.73
RPA3-201ENST00000223129 CALD1Q05682 793 aaKnown RBP19.58■□□□□ 0.73
RPA3-201ENST00000223129 CFAP44Q96MT7 982 aa19.58■□□□□ 0.73
RPA3-201ENST00000223129 SLC4A9Q96Q91 983 aa19.58■□□□□ 0.73
RPA3-201ENST00000223129 LRRC4BQ9NT99 713 aa19.58■□□□□ 0.73
RPA3-201ENST00000223129 LY75O60449 1722 aa19.58■□□□□ 0.72
RPA3-201ENST00000223129 LOC102724428A0A0B4J2F2 783 aa19.58■□□□□ 0.72
RPA3-201ENST00000223129 SIK1P57059 783 aa19.58■□□□□ 0.72
RPA3-201ENST00000223129 WDR63Q8IWG1 891 aa19.58■□□□□ 0.72
RPA3-201ENST00000223129 ZNF496Q96IT1 587 aaPredicted RBP19.58■□□□□ 0.72
RPA3-201ENST00000223129 ZNF853P0CG23 659 aa19.57■□□□□ 0.72
RPA3-201ENST00000223129 SPINK5Q9NQ38 1064 aaPredicted RBP19.57■□□□□ 0.72
RPA3-201ENST00000223129 CCNL1Q9UK58 526 aaPredicted RBP19.57■□□□□ 0.72
RPA3-201ENST00000223129 IFT57Q9NWB7 429 aa19.56■□□□□ 0.72
RPA3-201ENST00000223129 KCPQ6ZWJ8 1503 aa19.56■□□□□ 0.72
RPA3-201ENST00000223129 KDM3BQ7LBC6 1761 aa19.56■□□□□ 0.72
RPA3-201ENST00000223129 ATP6V1AP38606 617 aa19.56■□□□□ 0.72
RPA3-201ENST00000223129 GNAI1P63096 354 aa19.56■□□□□ 0.72
RPA3-201ENST00000223129 MBIPQ9NS73 344 aa19.56■□□□□ 0.72
RPA3-201ENST00000223129 BABAM1Q9NWV8 329 aa19.55■□□□□ 0.72
RPA3-201ENST00000223129 UBR2Q8IWV8 1755 aa19.55■□□□□ 0.72
RPA3-201ENST00000223129 TSR2Q969E8 191 aaKnown RBP19.54■□□□□ 0.72
RPA3-201ENST00000223129 RGPD3A6NKT7 1758 aaPredicted RBP19.54■□□□□ 0.72
RPA3-201ENST00000223129 RGPD4Q7Z3J3 1758 aa19.54■□□□□ 0.72
RPA3-201ENST00000223129 EIF4A1P60842 406 aaKnown RBP19.54■□□□□ 0.72
RPA3-201ENST00000223129 ITPK1Q13572 414 aa19.54■□□□□ 0.72
RPA3-201ENST00000223129 FMNL2Q96PY5 1086 aa19.54■□□□□ 0.72
RPA3-201ENST00000223129 IL16Q14005 1332 aa19.53■□□□□ 0.72
RPA3-201ENST00000223129 SLC27A3Q5K4L6 730 aa19.53■□□□□ 0.72
RPA3-201ENST00000223129 PRAMEF22A3QJZ6 481 aa19.52■□□□□ 0.72
RPA3-201ENST00000223129 KRT24Q2M2I5 525 aa19.52■□□□□ 0.72
RPA3-201ENST00000223129 CDCA7LQ96GN5 454 aa19.52■□□□□ 0.72
RPA3-201ENST00000223129 GOLGA2Q08379 1002 aa19.52■□□□□ 0.72
RPA3-201ENST00000223129 YTHDC1Q96MU7 727 aaKnown RBP19.52■□□□□ 0.72
RPA3-201ENST00000223129 HEG1Q9ULI3 1381 aa19.52■□□□□ 0.72
RPA3-201ENST00000223129 DNAJC10Q8IXB1 793 aa19.51■□□□□ 0.71
RPA3-201ENST00000223129 RREB1Q92766 1687 aa19.51■□□□□ 0.71
RPA3-201ENST00000223129 LINC00116Q8NCU8 138 aa19.51■□□□□ 0.71
RPA3-201ENST00000223129 VSIG10Q8N0Z9 540 aa19.5■□□□□ 0.71
RPA3-201ENST00000223129 SNRPA1P09661 255 aaKnown RBP19.49■□□□□ 0.71
RPA3-201ENST00000223129 USP16Q9Y5T5 823 aa19.49■□□□□ 0.71
RPA3-201ENST00000223129 TAF1LQ8IZX4 1826 aa19.49■□□□□ 0.71
RPA3-201ENST00000223129 TJP1Q07157 1748 aa19.49■□□□□ 0.71
RPA3-201ENST00000223129 FANCIQ9NVI1 1328 aa19.48■□□□□ 0.71
RPA3-201ENST00000223129 GIGYF1O75420 1035 aaPredicted RBP19.48■□□□□ 0.71
RPA3-201ENST00000223129 NUP188Q5SRE5 1749 aa19.48■□□□□ 0.71
RPA3-201ENST00000223129 ELL2O00472 640 aaPredicted RBP19.47■□□□□ 0.71
RPA3-201ENST00000223129 SLFN5Q08AF3 891 aa19.47■□□□□ 0.71
RPA3-201ENST00000223129 C5P01031 1676 aa19.47■□□□□ 0.71
RPA3-201ENST00000223129 ZBED9Q6R2W3 1325 aa19.47■□□□□ 0.71
RPA3-201ENST00000223129 C8orf58Q8NAV2 365 aa19.47■□□□□ 0.71
RPA3-201ENST00000223129 MYH16Q9H6N6 1097 aa19.47■□□□□ 0.71
RPA3-201ENST00000223129 ZNF831Q5JPB2 1677 aa19.47■□□□□ 0.71
RPA3-201ENST00000223129 E9PSI1 815 aa19.46■□□□□ 0.71
RPA3-201ENST00000223129 ANO8Q9HCE9 1232 aaPredicted RBP19.46■□□□□ 0.71
RPA3-201ENST00000223129 CYP19A1P11511 503 aaPredicted RBP19.46■□□□□ 0.71
RPA3-201ENST00000223129 ZNF827Q17R98 1081 aa19.45■□□□□ 0.7
RPA3-201ENST00000223129 TSPYL6Q8N831 410 aa19.45■□□□□ 0.7
RPA3-201ENST00000223129 COL5A3P25940 1745 aaPredicted RBP19.44■□□□□ 0.7
RPA3-201ENST00000223129 EXOSC9Q06265 439 aaKnown RBP19.44■□□□□ 0.7
RPA3-201ENST00000223129 DUSP27Q5VZP5 1158 aa19.44■□□□□ 0.7
RPA3-201ENST00000223129 TEX13AQ9BXU3 409 aaPredicted RBP19.44■□□□□ 0.7
RPA3-201ENST00000223129 C4BP0C0L5 1744 aa19.44■□□□□ 0.7
RPA3-201ENST00000223129 CRKLP46109 303 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms