RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 EPB41L2O43491 1005 aaKnown RBP20.92■□□□□ 0.94
EXTL3-201ENST00000220562 ABCF2Q9UG63 623 aa20.92■□□□□ 0.94
EXTL3-201ENST00000220562 LRRFIP2Q9Y608 721 aaKnown RBP20.91■□□□□ 0.94
EXTL3-201ENST00000220562 STARD3NLO95772 234 aa20.91■□□□□ 0.94
EXTL3-201ENST00000220562 CDK13Q14004 1512 aaKnown RBP20.9■□□□□ 0.94
EXTL3-201ENST00000220562 CFAP100Q494V2 611 aa20.9■□□□□ 0.94
EXTL3-201ENST00000220562 NESP48681 1621 aa20.9■□□□□ 0.94
EXTL3-201ENST00000220562 FERMT3Q86UX7 667 aa20.9■□□□□ 0.94
EXTL3-201ENST00000220562 AKAP2Q9Y2D5 859 aa20.9■□□□□ 0.94
EXTL3-201ENST00000220562 BOLA2Q9H3K6 86 aa20.9■□□□□ 0.94
EXTL3-201ENST00000220562 U3KPZ7 1027 aaPredicted RBP20.89■□□□□ 0.93
EXTL3-201ENST00000220562 DCAF8L1A6NGE4 600 aa20.89■□□□□ 0.93
EXTL3-201ENST00000220562 USHBP1Q8N6Y0 703 aa20.89■□□□□ 0.93
EXTL3-201ENST00000220562 TOP2BQ02880 1626 aa20.88■□□□□ 0.93
EXTL3-201ENST00000220562 GLRX3O76003 335 aaKnown RBP20.88■□□□□ 0.93
EXTL3-201ENST00000220562 PIP4K2BP78356 416 aa20.88■□□□□ 0.93
EXTL3-201ENST00000220562 WAPLQ7Z5K2 1190 aa20.88■□□□□ 0.93
EXTL3-201ENST00000220562 ZNF397Q8NF99 534 aaPredicted RBP20.88■□□□□ 0.93
EXTL3-201ENST00000220562 KCNH5Q8NCM2 988 aa20.87■□□□□ 0.93
EXTL3-201ENST00000220562 TAF4BQ92750 862 aa20.87■□□□□ 0.93
EXTL3-201ENST00000220562 MINDY4BA8MYZ0 360 aa20.87■□□□□ 0.93
EXTL3-201ENST00000220562 CCDC102AQ96A19 550 aa20.87■□□□□ 0.93
EXTL3-201ENST00000220562 SEC63Q9UGP8 760 aaKnown RBP20.87■□□□□ 0.93
EXTL3-201ENST00000220562 NKTRP30414 1462 aaKnown RBP20.87■□□□□ 0.93
EXTL3-201ENST00000220562 ALDH1L2Q3SY69 923 aa20.87■□□□□ 0.93
EXTL3-201ENST00000220562 PDIA4P13667 645 aaKnown RBP20.87■□□□□ 0.93
EXTL3-201ENST00000220562 DHX37Q8IY37 1157 aaKnown RBP20.87■□□□□ 0.93
EXTL3-201ENST00000220562 CCDC148Q8NFR7 591 aa20.87■□□□□ 0.93
EXTL3-201ENST00000220562 RARSP54136 660 aaKnown RBP20.86■□□□□ 0.93
EXTL3-201ENST00000220562 C20orf194Q5TEA3 1177 aa20.86■□□□□ 0.93
EXTL3-201ENST00000220562 IFIT1P09914 478 aaKnown RBP20.86■□□□□ 0.93
EXTL3-201ENST00000220562 ARHGAP29Q52LW3 1261 aa20.86■□□□□ 0.93
EXTL3-201ENST00000220562 JAKMIP3Q5VZ66 844 aa20.86■□□□□ 0.93
EXTL3-201ENST00000220562 SSH1Q8WYL5 1049 aa20.86■□□□□ 0.93
EXTL3-201ENST00000220562 SSR1P43307 286 aaKnown RBP20.86■□□□□ 0.93
EXTL3-201ENST00000220562 LARP1Q6PKG0 1096 aaKnown RBP20.85■□□□□ 0.93
EXTL3-201ENST00000220562 POLR3DP05423 398 aaPredicted RBP20.85■□□□□ 0.93
EXTL3-201ENST00000220562 HSP90AB3PQ58FF7 597 aa20.85■□□□□ 0.93
EXTL3-201ENST00000220562 PTCD1O75127 700 aaKnown RBP20.85■□□□□ 0.93
EXTL3-201ENST00000220562 TMOD3Q9NYL9 352 aa20.85■□□□□ 0.93
EXTL3-201ENST00000220562 POLA1P09884 1462 aaPredicted RBP20.85■□□□□ 0.93
EXTL3-201ENST00000220562 ESPNB1AK53 854 aa20.85■□□□□ 0.93
EXTL3-201ENST00000220562 SKAP1Q86WV1 359 aa20.85■□□□□ 0.93
EXTL3-201ENST00000220562 GBP2P32456 591 aaPredicted RBP20.85■□□□□ 0.93
EXTL3-201ENST00000220562 CAVIN4Q5BKX8 364 aa20.85■□□□□ 0.93
EXTL3-201ENST00000220562 CCDC61Q9Y6R9 512 aa20.85■□□□□ 0.93
EXTL3-201ENST00000220562 TAF7Q15545 349 aaPredicted RBP20.84■□□□□ 0.93
EXTL3-201ENST00000220562 CCDC183Q5T5S1 534 aa20.84■□□□□ 0.93
EXTL3-201ENST00000220562 GUCY1B3Q02153 619 aa20.84■□□□□ 0.93
EXTL3-201ENST00000220562 TOPBP1Q92547 1522 aa20.84■□□□□ 0.93
EXTL3-201ENST00000220562 CCDC141Q6ZP82 1450 aa20.84■□□□□ 0.93
EXTL3-201ENST00000220562 GOLGA6L7A0A1B0GV03 622 aa20.84■□□□□ 0.93
EXTL3-201ENST00000220562 CCDC8Q9H0W5 538 aaPredicted RBP20.84■□□□□ 0.93
EXTL3-201ENST00000220562 F6X3S4 739 aa20.83■□□□□ 0.93
EXTL3-201ENST00000220562 MKNK2Q9HBH9 465 aa20.83■□□□□ 0.92
EXTL3-201ENST00000220562 POGZQ7Z3K3 1410 aa20.82■□□□□ 0.92
EXTL3-201ENST00000220562 KLHL10Q6JEL2 608 aa20.82■□□□□ 0.92
EXTL3-201ENST00000220562 NAPBQ9H115 298 aa20.82■□□□□ 0.92
EXTL3-201ENST00000220562 ZNF652Q9Y2D9 606 aa20.82■□□□□ 0.92
EXTL3-201ENST00000220562 PRXQ9BXM0 1461 aa20.82■□□□□ 0.92
EXTL3-201ENST00000220562 NME9Q86XW9 330 aa20.82■□□□□ 0.92
EXTL3-201ENST00000220562 CASQ1P31415 396 aa20.82■□□□□ 0.92
EXTL3-201ENST00000220562 ZNF287Q9HBT7 754 aa20.82■□□□□ 0.92
EXTL3-201ENST00000220562 ANO10Q9NW15 660 aa20.82■□□□□ 0.92
EXTL3-201ENST00000220562 EPRSP07814 1512 aaKnown RBP20.81■□□□□ 0.92
EXTL3-201ENST00000220562 DESP17661 470 aa20.81■□□□□ 0.92
EXTL3-201ENST00000220562 ARHGEF11O15085 1522 aa20.81■□□□□ 0.92
EXTL3-201ENST00000220562 C8orf76Q96K31 380 aa20.81■□□□□ 0.92
EXTL3-201ENST00000220562 SPA17Q15506 151 aa20.8■□□□□ 0.92
EXTL3-201ENST00000220562 FAM135AQ9P2D6 1515 aa20.8■□□□□ 0.92
EXTL3-201ENST00000220562 ERICH4A6NGS2 130 aa20.8■□□□□ 0.92
EXTL3-201ENST00000220562 TAF3Q5VWG9 929 aa20.8■□□□□ 0.92
EXTL3-201ENST00000220562 TSG101Q99816 390 aa20.8■□□□□ 0.92
EXTL3-201ENST00000220562 SH2B1Q9NRF2 756 aaPredicted RBP20.8■□□□□ 0.92
EXTL3-201ENST00000220562 NEBLO76041 1014 aa20.8■□□□□ 0.92
EXTL3-201ENST00000220562 TMOD2Q9NZR1 351 aa20.8■□□□□ 0.92
EXTL3-201ENST00000220562 PLEKHH1Q9ULM0 1364 aa20.8■□□□□ 0.92
EXTL3-201ENST00000220562 UBXN4Q92575 508 aa20.8■□□□□ 0.92
EXTL3-201ENST00000220562 CAMSAP2Q08AD1 1489 aa20.8■□□□□ 0.92
EXTL3-201ENST00000220562 ANKIB1Q9P2G1 1089 aa20.8■□□□□ 0.92
EXTL3-201ENST00000220562 CRACR2BQ8N4Y2 399 aaPredicted RBP20.79■□□□□ 0.92
EXTL3-201ENST00000220562 PTPN23Q9H3S7 1636 aa20.79■□□□□ 0.92
EXTL3-201ENST00000220562 PPP1R12BO60237 982 aaPredicted RBP20.79■□□□□ 0.92
EXTL3-201ENST00000220562 ZPR1O75312 459 aa20.79■□□□□ 0.92
EXTL3-201ENST00000220562 IBSPP21815 317 aaPredicted RBP20.79■□□□□ 0.92
EXTL3-201ENST00000220562 ABCC11Q96J66 1382 aa20.79■□□□□ 0.92
EXTL3-201ENST00000220562 SLC12A7Q9Y666 1083 aa20.79■□□□□ 0.92
EXTL3-201ENST00000220562 SFPQP23246 707 aaKnown RBP eCLIP20.79■□□□□ 0.92
EXTL3-201ENST00000220562 FKBP15Q5T1M5 1219 aa20.79■□□□□ 0.92
EXTL3-201ENST00000220562 ZSCAN30Q86W11 494 aa20.79■□□□□ 0.92
EXTL3-201ENST00000220562 SSRP1Q08945 709 aaKnown RBP20.79■□□□□ 0.92
EXTL3-201ENST00000220562 PTPN14Q15678 1187 aa20.79■□□□□ 0.92
EXTL3-201ENST00000220562 MPRIPQ6WCQ1 1025 aa20.79■□□□□ 0.92
EXTL3-201ENST00000220562 SSFA2P28290 1259 aa20.78■□□□□ 0.92
EXTL3-201ENST00000220562 DZIP1Q86YF9 867 aaKnown RBP20.78■□□□□ 0.92
EXTL3-201ENST00000220562 PDCL2Q8N4E4 241 aa20.78■□□□□ 0.92
EXTL3-201ENST00000220562 PCF11O94913 1555 aaKnown RBP20.78■□□□□ 0.92
EXTL3-201ENST00000220562 NAIPQ13075 1403 aa20.78■□□□□ 0.92
EXTL3-201ENST00000220562 TNIP1Q15025 636 aa20.78■□□□□ 0.92
EXTL3-201ENST00000220562 HMGB1P09429 215 aaKnown RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms