RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 GLI2P10070 1586 aa14.88□□□□□ -0.03
TM9SF4-201ENST00000217315 MBD3O95983 291 aa14.88□□□□□ -0.03
TM9SF4-201ENST00000217315 LRRC59Q96AG4 307 aaKnown RBP14.88□□□□□ -0.03
TM9SF4-201ENST00000217315 LARP6Q9BRS8 491 aaKnown RBP14.88□□□□□ -0.03
TM9SF4-201ENST00000217315 CHPF2Q9P2E5 772 aa14.88□□□□□ -0.03
TM9SF4-201ENST00000217315 PLEKHG3A1L390 1219 aa14.88□□□□□ -0.03
TM9SF4-201ENST00000217315 DBF4Q9UBU7 674 aaPredicted RBP14.88□□□□□ -0.03
TM9SF4-201ENST00000217315 BAG4O95429 457 aaKnown RBP14.88□□□□□ -0.03
TM9SF4-201ENST00000217315 ARID3AQ99856 593 aa14.88□□□□□ -0.03
TM9SF4-201ENST00000217315 PANK2Q9BZ23 570 aa14.88□□□□□ -0.03
TM9SF4-201ENST00000217315 ISY1Q9ULR0 285 aaKnown RBP14.88□□□□□ -0.03
TM9SF4-201ENST00000217315 ABCC4O15439 1325 aa14.88□□□□□ -0.03
TM9SF4-201ENST00000217315 PRR36Q9H6K5 1346 aa14.88□□□□□ -0.03
TM9SF4-201ENST00000217315 HOXC9P31274 260 aa14.87□□□□□ -0.03
TM9SF4-201ENST00000217315 RAB11FIP3O75154 756 aa14.87□□□□□ -0.03
TM9SF4-201ENST00000217315 GNL2Q13823 731 aaKnown RBP14.87□□□□□ -0.03
TM9SF4-201ENST00000217315 AMOTQ4VCS5 1084 aa14.87□□□□□ -0.03
TM9SF4-201ENST00000217315 PIK3R4Q99570 1358 aa14.87□□□□□ -0.03
TM9SF4-201ENST00000217315 GLRX3O76003 335 aaKnown RBP14.86□□□□□ -0.03
TM9SF4-201ENST00000217315 USP19O94966 1318 aa14.86□□□□□ -0.03
TM9SF4-201ENST00000217315 IQGAP1P46940 1657 aa14.86□□□□□ -0.03
TM9SF4-201ENST00000217315 FOSBP53539 338 aa14.86□□□□□ -0.03
TM9SF4-201ENST00000217315 PHAXQ9H814 394 aaKnown RBP14.86□□□□□ -0.03
TM9SF4-201ENST00000217315 ATP8B2P98198 1209 aa14.86□□□□□ -0.03
TM9SF4-201ENST00000217315 JAKMIP1Q96N16 626 aaKnown RBP14.86□□□□□ -0.03
TM9SF4-201ENST00000217315 SPG7Q9UQ90 795 aa14.86□□□□□ -0.03
TM9SF4-201ENST00000217315 NPHP1O15259 732 aa14.86□□□□□ -0.03
TM9SF4-201ENST00000217315 XRCC6P12956 609 aaKnown RBP eCLIP14.86□□□□□ -0.03
TM9SF4-201ENST00000217315 SYTL4Q96C24 671 aaPredicted RBP14.86□□□□□ -0.03
TM9SF4-201ENST00000217315 CYP46A1Q9Y6A2 500 aa14.85□□□□□ -0.03
TM9SF4-201ENST00000217315 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.85□□□□□ -0.03
TM9SF4-201ENST00000217315 CABP4P57796 275 aa14.85□□□□□ -0.03
TM9SF4-201ENST00000217315 RHPN1Q8TCX5 695 aa14.85□□□□□ -0.03
TM9SF4-201ENST00000217315 MAP3K2Q9Y2U5 619 aa14.85□□□□□ -0.03
TM9SF4-201ENST00000217315 LMTK2Q8IWU2 1503 aa14.85□□□□□ -0.03
TM9SF4-201ENST00000217315 WDR33Q9C0J8 1336 aaKnown RBP14.85□□□□□ -0.03
TM9SF4-201ENST00000217315 CCDC8Q9H0W5 538 aaPredicted RBP14.85□□□□□ -0.03
TM9SF4-201ENST00000217315 QRICH2Q9H0J4 1663 aa14.85□□□□□ -0.03
TM9SF4-201ENST00000217315 TULP4Q9NRJ4 1543 aa14.84□□□□□ -0.03
TM9SF4-201ENST00000217315 CASTP20810 708 aaKnown RBP14.84□□□□□ -0.03
TM9SF4-201ENST00000217315 CHAF1AQ13111 956 aaPredicted RBP14.84□□□□□ -0.03
TM9SF4-201ENST00000217315 USP26Q9BXU7 913 aa14.84□□□□□ -0.03
TM9SF4-201ENST00000217315 BOLA2Q9H3K6 86 aa14.84□□□□□ -0.03
TM9SF4-201ENST00000217315 KIF3AQ9Y496 699 aa14.84□□□□□ -0.03
TM9SF4-201ENST00000217315 KIDINS220Q9ULH0 1771 aa14.84□□□□□ -0.03
TM9SF4-201ENST00000217315 ESPNB1AK53 854 aa14.84□□□□□ -0.03
TM9SF4-201ENST00000217315 PSMA5P28066 241 aa14.84□□□□□ -0.03
TM9SF4-201ENST00000217315 ROBO2Q9HCK4 1378 aa14.84□□□□□ -0.03
TM9SF4-201ENST00000217315 SETBP1Q9Y6X0 1596 aa14.83□□□□□ -0.03
TM9SF4-201ENST00000217315 ANKRD24Q8TF21 1146 aa14.83□□□□□ -0.03
TM9SF4-201ENST00000217315 SIRT1Q96EB6 747 aa14.83□□□□□ -0.03
TM9SF4-201ENST00000217315 STRN4Q9NRL3 753 aa14.83□□□□□ -0.03
TM9SF4-201ENST00000217315 MPNDQ8N594 471 aa14.83□□□□□ -0.04
TM9SF4-201ENST00000217315 BICD2Q8TD16 824 aa14.83□□□□□ -0.04
TM9SF4-201ENST00000217315 ESYT1Q9BSJ8 1104 aa14.83□□□□□ -0.04
TM9SF4-201ENST00000217315 TSPOAP1O95153 1857 aa14.83□□□□□ -0.04
TM9SF4-201ENST00000217315 ZNF853P0CG23 659 aa14.83□□□□□ -0.04
TM9SF4-201ENST00000217315 GSPT1P15170 499 aaKnown RBP14.83□□□□□ -0.04
TM9SF4-201ENST00000217315 STK3Q13188 491 aa14.83□□□□□ -0.04
TM9SF4-201ENST00000217315 TMX3Q96JJ7 454 aa14.83□□□□□ -0.04
TM9SF4-201ENST00000217315 SBNO1A3KN83 1393 aa14.83□□□□□ -0.04
TM9SF4-201ENST00000217315 SYCE3A1L190 88 aa14.82□□□□□ -0.04
TM9SF4-201ENST00000217315 PRPF40BQ6NWY9 871 aaKnown RBP14.82□□□□□ -0.04
TM9SF4-201ENST00000217315 KRT28Q7Z3Y7 464 aa14.82□□□□□ -0.04
TM9SF4-201ENST00000217315 SIRT2Q8IXJ6 389 aa14.82□□□□□ -0.04
TM9SF4-201ENST00000217315 ZGPATQ8N5A5 531 aaKnown RBP14.82□□□□□ -0.04
TM9SF4-201ENST00000217315 GDPD2Q9HCC8 539 aa14.82□□□□□ -0.04
TM9SF4-201ENST00000217315 AATKQ6ZMQ8 1374 aa14.82□□□□□ -0.04
TM9SF4-201ENST00000217315 ATP7BP35670 1465 aa14.82□□□□□ -0.04
TM9SF4-201ENST00000217315 CCDC173Q0VFZ6 552 aa14.82□□□□□ -0.04
TM9SF4-201ENST00000217315 RAB3GAP1Q15042 981 aa14.82□□□□□ -0.04
TM9SF4-201ENST00000217315 SF3A1Q15459 793 aaKnown RBP14.82□□□□□ -0.04
TM9SF4-201ENST00000217315 TOM1L2Q6ZVM7 507 aa14.82□□□□□ -0.04
TM9SF4-201ENST00000217315 TOMM22Q9NS69 142 aa14.82□□□□□ -0.04
TM9SF4-201ENST00000217315 FAM135BQ49AJ0 1406 aa14.82□□□□□ -0.04
TM9SF4-201ENST00000217315 HIP1O00291 1037 aa14.82□□□□□ -0.04
TM9SF4-201ENST00000217315 MAP3K5Q99683 1374 aa14.82□□□□□ -0.04
TM9SF4-201ENST00000217315 PNMA6EA0A0J9YXQ4 647 aa14.81□□□□□ -0.04
TM9SF4-201ENST00000217315 MYD88Q99836 296 aa14.81□□□□□ -0.04
TM9SF4-201ENST00000217315 PRDM11Q9NQV5 511 aa14.81□□□□□ -0.04
TM9SF4-201ENST00000217315 PDRG1Q9NUG6 133 aa14.81□□□□□ -0.04
TM9SF4-201ENST00000217315 SLC39A6Q13433 755 aa14.81□□□□□ -0.04
TM9SF4-201ENST00000217315 JARID2Q92833 1246 aaPredicted RBP14.81□□□□□ -0.04
TM9SF4-201ENST00000217315 LARP1Q6PKG0 1096 aaKnown RBP14.81□□□□□ -0.04
TM9SF4-201ENST00000217315 PTCD1O75127 700 aaKnown RBP14.8□□□□□ -0.04
TM9SF4-201ENST00000217315 WASHC4Q2M389 1173 aa14.8□□□□□ -0.04
TM9SF4-201ENST00000217315 CCDC83Q8IWF9 413 aa14.8□□□□□ -0.04
TM9SF4-201ENST00000217315 LGR6Q9HBX8 967 aa14.8□□□□□ -0.04
TM9SF4-201ENST00000217315 BRPF1P55201 1214 aaPredicted RBP14.8□□□□□ -0.04
TM9SF4-201ENST00000217315 BLOC1S2Q6QNY1 142 aa14.8□□□□□ -0.04
TM9SF4-201ENST00000217315 ECHDC1Q9NTX5 307 aa14.8□□□□□ -0.04
TM9SF4-201ENST00000217315 GOLGA6L6A8MZA4 724 aa14.8□□□□□ -0.04
TM9SF4-201ENST00000217315 TSPY26PQ9H489 355 aa14.8□□□□□ -0.04
TM9SF4-201ENST00000217315 APPP05067 770 aa14.79□□□□□ -0.04
TM9SF4-201ENST00000217315 CHRNA2Q15822 529 aa14.79□□□□□ -0.04
TM9SF4-201ENST00000217315 HYPKQ9NX55 129 aa14.79□□□□□ -0.04
TM9SF4-201ENST00000217315 GCP02774 474 aa14.79□□□□□ -0.04
TM9SF4-201ENST00000217315 KLHL40Q2TBA0 621 aa14.79□□□□□ -0.04
TM9SF4-201ENST00000217315 A2ML1A8K2U0 1454 aa14.79□□□□□ -0.04
TM9SF4-201ENST00000217315 LARP1BQ659C4 914 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms