RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 ZNF830Q96NB3 372 aaPredicted RBP11.73□□□□□ -0.53
TUBB1-201ENST00000217133 CCDC94Q9BW85 323 aaPredicted RBP11.73□□□□□ -0.53
TUBB1-201ENST00000217133 BRD1O95696 1058 aa11.73□□□□□ -0.53
TUBB1-201ENST00000217133 FAM135BQ49AJ0 1406 aa11.73□□□□□ -0.53
TUBB1-201ENST00000217133 ANO2Q9NQ90 1003 aa11.73□□□□□ -0.53
TUBB1-201ENST00000217133 USP25Q9UHP3 1055 aa11.73□□□□□ -0.53
TUBB1-201ENST00000217133 ZHX1Q9UKY1 873 aaPredicted RBP11.73□□□□□ -0.53
TUBB1-201ENST00000217133 EMILIN1Q9Y6C2 1016 aa11.73□□□□□ -0.53
TUBB1-201ENST00000217133 MYRIPQ8NFW9 859 aa11.72□□□□□ -0.53
TUBB1-201ENST00000217133 LRRC7Q96NW7 1537 aa11.72□□□□□ -0.53
TUBB1-201ENST00000217133 ROBO2Q9HCK4 1378 aa11.72□□□□□ -0.53
TUBB1-201ENST00000217133 PLEKHG1Q9ULL1 1385 aa11.72□□□□□ -0.53
TUBB1-201ENST00000217133 ZNF853P0CG23 659 aa11.72□□□□□ -0.53
TUBB1-201ENST00000217133 TRIM6-TRIM34B2RNG4 842 aa11.72□□□□□ -0.53
TUBB1-201ENST00000217133 SLC4A10Q6U841 1118 aa11.72□□□□□ -0.53
TUBB1-201ENST00000217133 TSC1Q92574 1164 aa11.72□□□□□ -0.53
TUBB1-201ENST00000217133 MEIS3Q99687 375 aa11.72□□□□□ -0.53
TUBB1-201ENST00000217133 NOLC1Q14978 699 aaKnown RBP eCLIP11.71□□□□□ -0.53
TUBB1-201ENST00000217133 FAM184AQ8NB25 1140 aa11.71□□□□□ -0.53
TUBB1-201ENST00000217133 PRIMPOLQ96LW4 560 aa11.71□□□□□ -0.53
TUBB1-201ENST00000217133 RILPL2Q969X0 211 aa11.71□□□□□ -0.54
TUBB1-201ENST00000217133 TBX22Q9Y458 520 aa11.71□□□□□ -0.54
TUBB1-201ENST00000217133 KIF24Q5T7B8 1368 aa11.71□□□□□ -0.54
TUBB1-201ENST00000217133 PTPRUQ92729 1446 aa11.71□□□□□ -0.54
TUBB1-201ENST00000217133 C14orf37Q86TY3 774 aa11.7□□□□□ -0.54
TUBB1-201ENST00000217133 TTC12Q9H892 705 aaPredicted RBP11.7□□□□□ -0.54
TUBB1-201ENST00000217133 PDE1AP54750 535 aa11.7□□□□□ -0.54
TUBB1-201ENST00000217133 UPF3BQ9BZI7 483 aaKnown RBP11.7□□□□□ -0.54
TUBB1-201ENST00000217133 GADD45BO75293 160 aaPredicted RBP11.7□□□□□ -0.54
TUBB1-201ENST00000217133 WDR33Q9C0J8 1336 aaKnown RBP11.69□□□□□ -0.54
TUBB1-201ENST00000217133 ADCY5O95622 1261 aa11.69□□□□□ -0.54
TUBB1-201ENST00000217133 KRT24Q2M2I5 525 aa11.69□□□□□ -0.54
TUBB1-201ENST00000217133 TSHZ3Q63HK5 1081 aa11.69□□□□□ -0.54
TUBB1-201ENST00000217133 PIBF1Q8WXW3 757 aa11.69□□□□□ -0.54
TUBB1-201ENST00000217133 JARID2Q92833 1246 aaPredicted RBP11.69□□□□□ -0.54
TUBB1-201ENST00000217133 KIF3AQ9Y496 699 aa11.69□□□□□ -0.54
TUBB1-201ENST00000217133 ARHGAP23Q9P227 1491 aa11.69□□□□□ -0.54
TUBB1-201ENST00000217133 CBX1P83916 185 aa11.69□□□□□ -0.54
TUBB1-201ENST00000217133 CHAF1AQ13111 956 aaPredicted RBP11.69□□□□□ -0.54
TUBB1-201ENST00000217133 UVSSAQ2YD98 709 aa11.69□□□□□ -0.54
TUBB1-201ENST00000217133 USP48Q86UV5 1035 aa11.69□□□□□ -0.54
TUBB1-201ENST00000217133 SETD1BQ9UPS6 1966 aaKnown RBP11.69□□□□□ -0.54
TUBB1-201ENST00000217133 C17orf53Q8N3J3 647 aaPredicted RBP11.69□□□□□ -0.54
TUBB1-201ENST00000217133 PODXL2Q9NZ53 605 aa11.69□□□□□ -0.54
TUBB1-201ENST00000217133 INTS4Q96HW7 963 aaKnown RBP11.68□□□□□ -0.54
TUBB1-201ENST00000217133 ESYT1Q9BSJ8 1104 aa11.68□□□□□ -0.54
TUBB1-201ENST00000217133 MSH6P52701 1360 aa11.68□□□□□ -0.54
TUBB1-201ENST00000217133 PLEKHG5O94827 1062 aa11.68□□□□□ -0.54
TUBB1-201ENST00000217133 HCLS1P14317 486 aaPredicted RBP11.68□□□□□ -0.54
TUBB1-201ENST00000217133 IL13P35225 146 aa11.68□□□□□ -0.54
TUBB1-201ENST00000217133 EXOC6BQ9Y2D4 811 aa11.68□□□□□ -0.54
TUBB1-201ENST00000217133 RTL1A6NKG5 1358 aa11.68□□□□□ -0.54
TUBB1-201ENST00000217133 FAM177BA6PVY3 158 aa11.68□□□□□ -0.54
TUBB1-201ENST00000217133 CUL4AQ13619 759 aa11.68□□□□□ -0.54
TUBB1-201ENST00000217133 SLIT1O75093 1534 aa11.67□□□□□ -0.54
TUBB1-201ENST00000217133 CCDC183Q5T5S1 534 aa11.67□□□□□ -0.54
TUBB1-201ENST00000217133 PALD1Q9ULE6 856 aa11.67□□□□□ -0.54
TUBB1-201ENST00000217133 NRXN3Q9Y4C0 1643 aa11.67□□□□□ -0.54
TUBB1-201ENST00000217133 SLC4A2P04920 1241 aa11.67□□□□□ -0.54
TUBB1-201ENST00000217133 ATP10DQ9P241 1426 aa11.67□□□□□ -0.54
TUBB1-201ENST00000217133 RRS1Q15050 365 aaKnown RBP11.66□□□□□ -0.54
TUBB1-201ENST00000217133 PPP4R3BQ5MIZ7 849 aa11.66□□□□□ -0.54
TUBB1-201ENST00000217133 NPHP4O75161 1426 aaPredicted RBP11.66□□□□□ -0.54
TUBB1-201ENST00000217133 LETM1O95202 739 aaPredicted RBP11.66□□□□□ -0.54
TUBB1-201ENST00000217133 ANAPC15P60006 121 aa11.66□□□□□ -0.54
TUBB1-201ENST00000217133 NME9Q86XW9 330 aa11.66□□□□□ -0.54
TUBB1-201ENST00000217133 ARHGEF28Q8N1W1 1705 aaKnown RBP11.65□□□□□ -0.54
TUBB1-201ENST00000217133 COG3Q96JB2 828 aa11.65□□□□□ -0.54
TUBB1-201ENST00000217133 PTPRCP08575 1304 aa11.65□□□□□ -0.54
TUBB1-201ENST00000217133 DMTNQ08495 405 aa11.65□□□□□ -0.54
TUBB1-201ENST00000217133 DIAPH3Q9NSV4 1193 aa11.65□□□□□ -0.54
TUBB1-201ENST00000217133 F6X3S4 739 aa11.65□□□□□ -0.55
TUBB1-201ENST00000217133 WASLO00401 505 aaPredicted RBP11.65□□□□□ -0.55
TUBB1-201ENST00000217133 FIBPO43427 364 aa11.65□□□□□ -0.55
TUBB1-201ENST00000217133 MX1P20591 662 aa11.65□□□□□ -0.55
TUBB1-201ENST00000217133 LRRCC1Q9C099 1032 aa11.65□□□□□ -0.55
TUBB1-201ENST00000217133 OSBPL3Q9H4L5 887 aa11.65□□□□□ -0.55
TUBB1-201ENST00000217133 CD163L1Q9NR16 1453 aa11.64□□□□□ -0.55
TUBB1-201ENST00000217133 MCM10Q7L590 875 aa11.64□□□□□ -0.55
TUBB1-201ENST00000217133 PROSER2Q86WR7 435 aaPredicted RBP11.64□□□□□ -0.55
TUBB1-201ENST00000217133 ZRANB1Q9UGI0 708 aa11.64□□□□□ -0.55
TUBB1-201ENST00000217133 CNPY2Q9Y2B0 182 aa11.64□□□□□ -0.55
TUBB1-201ENST00000217133 GNAI2P04899 355 aa11.64□□□□□ -0.55
TUBB1-201ENST00000217133 PDCL2Q8N4E4 241 aa11.64□□□□□ -0.55
TUBB1-201ENST00000217133 CHMLP26374 656 aa11.63□□□□□ -0.55
TUBB1-201ENST00000217133 UTP14CQ5TAP6 766 aaKnown RBP11.63□□□□□ -0.55
TUBB1-201ENST00000217133 SRCIN1Q9C0H9 1055 aa11.63□□□□□ -0.55
TUBB1-201ENST00000217133 A0A0U1RQG5 324 aaPredicted RBP11.63□□□□□ -0.55
TUBB1-201ENST00000217133 SULT6B1Q6IMI4 303 aa11.63□□□□□ -0.55
TUBB1-201ENST00000217133 ZNF710Q8N1W2 664 aa11.63□□□□□ -0.55
TUBB1-201ENST00000217133 SPC24Q8NBT2 197 aa11.63□□□□□ -0.55
TUBB1-201ENST00000217133 LMTK3Q96Q04 1460 aa11.63□□□□□ -0.55
TUBB1-201ENST00000217133 GOLGA6L6A8MZA4 724 aa11.63□□□□□ -0.55
TUBB1-201ENST00000217133 NUDT16Q96DE0 195 aaKnown RBP11.63□□□□□ -0.55
TUBB1-201ENST00000217133 BCL2L12Q9HB09 334 aa11.63□□□□□ -0.55
TUBB1-201ENST00000217133 ATP6V1DQ9Y5K8 247 aa11.63□□□□□ -0.55
TUBB1-201ENST00000217133 ZNF335Q9H4Z2 1342 aaPredicted RBP11.63□□□□□ -0.55
TUBB1-201ENST00000217133 SPDYE4A6NLX3 237 aa11.62□□□□□ -0.55
TUBB1-201ENST00000217133 KDM4AO75164 1064 aa11.62□□□□□ -0.55
TUBB1-201ENST00000217133 ZSCAN20P17040 1043 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms