RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 MPRIPQ6WCQ1 1025 aa16.22■□□□□ 0.19
CTNS-201ENST00000046640 TNPO1Q92973 898 aaKnown RBP16.22■□□□□ 0.19
CTNS-201ENST00000046640 MAP3K5Q99683 1374 aa16.22■□□□□ 0.19
CTNS-201ENST00000046640 PNMA6EA0A0J9YXQ4 647 aa16.22■□□□□ 0.19
CTNS-201ENST00000046640 CCT4P50991 539 aaKnown RBP16.22■□□□□ 0.19
CTNS-201ENST00000046640 HDGFL1Q5TGJ6 251 aa16.22■□□□□ 0.19
CTNS-201ENST00000046640 KIF24Q5T7B8 1368 aa16.21■□□□□ 0.19
CTNS-201ENST00000046640 GNAI2P04899 355 aa16.2■□□□□ 0.18
CTNS-201ENST00000046640 IP6K1Q92551 441 aa16.2■□□□□ 0.18
CTNS-201ENST00000046640 FMN2Q9NZ56 1722 aa16.2■□□□□ 0.18
CTNS-201ENST00000046640 ANKARQ7Z5J8 1434 aa16.2■□□□□ 0.18
CTNS-201ENST00000046640 FSD2A1L4K1 749 aa16.2■□□□□ 0.18
CTNS-201ENST00000046640 LRRFIP2Q9Y608 721 aaKnown RBP16.2■□□□□ 0.18
CTNS-201ENST00000046640 HMMRO75330 724 aa16.2■□□□□ 0.18
CTNS-201ENST00000046640 XRN1Q8IZH2 1706 aaKnown RBP16.19■□□□□ 0.18
CTNS-201ENST00000046640 GRPEL1Q9HAV7 217 aa16.18■□□□□ 0.18
CTNS-201ENST00000046640 HTATSF1O43719 755 aaKnown RBP16.18■□□□□ 0.18
CTNS-201ENST00000046640 ZNF530Q6P9A1 599 aaPredicted RBP16.18■□□□□ 0.18
CTNS-201ENST00000046640 DDX11L8A8MPP1 907 aa16.17■□□□□ 0.18
CTNS-201ENST00000046640 DDX17Q92841 729 aaKnown RBP16.17■□□□□ 0.18
CTNS-201ENST00000046640 GCP02774 474 aa16.17■□□□□ 0.18
CTNS-201ENST00000046640 IL1RAPL2Q9NP60 686 aa16.17■□□□□ 0.18
CTNS-201ENST00000046640 GAS2L3Q86XJ1 694 aa16.16■□□□□ 0.18
CTNS-201ENST00000046640 CHPF2Q9P2E5 772 aa16.16■□□□□ 0.18
CTNS-201ENST00000046640 ZC3H6P61129 1189 aaKnown RBP16.16■□□□□ 0.18
CTNS-201ENST00000046640 TEFQ10587 303 aa16.16■□□□□ 0.18
CTNS-201ENST00000046640 SNX21Q969T3 373 aa16.16■□□□□ 0.18
CTNS-201ENST00000046640 MRE11P49959 708 aa16.16■□□□□ 0.18
CTNS-201ENST00000046640 USP44Q9H0E7 712 aa16.16■□□□□ 0.18
CTNS-201ENST00000046640 NWD1Q149M9 1564 aa16.16■□□□□ 0.18
CTNS-201ENST00000046640 SSFA2P28290 1259 aa16.15■□□□□ 0.18
CTNS-201ENST00000046640 PDE1AP54750 535 aa16.15■□□□□ 0.18
CTNS-201ENST00000046640 AXIN2Q9Y2T1 843 aa16.15■□□□□ 0.18
CTNS-201ENST00000046640 PROSER2Q86WR7 435 aaPredicted RBP16.15■□□□□ 0.18
CTNS-201ENST00000046640 RILPL2Q969X0 211 aa16.15■□□□□ 0.18
CTNS-201ENST00000046640 USP26Q9BXU7 913 aa16.15■□□□□ 0.18
CTNS-201ENST00000046640 BTBD11A6QL63 1104 aa16.14■□□□□ 0.17
CTNS-201ENST00000046640 K7ELQ4 463 aaPredicted RBP16.14■□□□□ 0.17
CTNS-201ENST00000046640 UBTFL1P0CB47 393 aaPredicted RBP16.14■□□□□ 0.17
CTNS-201ENST00000046640 PRAMEF22A3QJZ6 481 aa16.14■□□□□ 0.17
CTNS-201ENST00000046640 TRIM6-TRIM34B2RNG4 842 aa16.14■□□□□ 0.17
CTNS-201ENST00000046640 GNAI3P08754 354 aa16.14■□□□□ 0.17
CTNS-201ENST00000046640 AK9Q5TCS8 1911 aa16.13■□□□□ 0.17
CTNS-201ENST00000046640 NCLP19338 710 aaKnown RBP16.13■□□□□ 0.17
CTNS-201ENST00000046640 LRRCC1Q9C099 1032 aa16.13■□□□□ 0.17
CTNS-201ENST00000046640 PI4KAP2A4QPH2 592 aa16.13■□□□□ 0.17
CTNS-201ENST00000046640 MAP4K4O95819 1239 aaPredicted RBP16.13■□□□□ 0.17
CTNS-201ENST00000046640 EIF4A1P60842 406 aaKnown RBP16.13■□□□□ 0.17
CTNS-201ENST00000046640 PI4KAP1Q8N8J0 262 aa16.13■□□□□ 0.17
CTNS-201ENST00000046640 GBP4Q96PP9 640 aa16.13■□□□□ 0.17
CTNS-201ENST00000046640 NBPF7P0C2Y1 421 aaPredicted RBP16.12■□□□□ 0.17
CTNS-201ENST00000046640 CASC1Q6TDU7 716 aa16.12■□□□□ 0.17
CTNS-201ENST00000046640 NUTM1Q86Y26 1132 aa16.12■□□□□ 0.17
CTNS-201ENST00000046640 KCNH5Q8NCM2 988 aa16.12■□□□□ 0.17
CTNS-201ENST00000046640 ANKRD24Q8TF21 1146 aa16.12■□□□□ 0.17
CTNS-201ENST00000046640 ATP8B2P98198 1209 aa16.12■□□□□ 0.17
CTNS-201ENST00000046640 MARF1Q9Y4F3 1742 aaKnown RBP16.11■□□□□ 0.17
CTNS-201ENST00000046640 KRT28Q7Z3Y7 464 aa16.11■□□□□ 0.17
CTNS-201ENST00000046640 TRIM44Q96DX7 344 aaPredicted RBP16.11■□□□□ 0.17
CTNS-201ENST00000046640 SURF6O75683 361 aaKnown RBP16.11■□□□□ 0.17
CTNS-201ENST00000046640 DDIT3P35638 169 aa16.11■□□□□ 0.17
CTNS-201ENST00000046640 C1orf141Q5JVX7 400 aa16.11■□□□□ 0.17
CTNS-201ENST00000046640 MX1P20591 662 aa16.1■□□□□ 0.17
CTNS-201ENST00000046640 RAB3GAP1Q15042 981 aa16.1■□□□□ 0.17
CTNS-201ENST00000046640 PLEKHO1Q53GL0 409 aaPredicted RBP16.1■□□□□ 0.17
CTNS-201ENST00000046640 PPP1R42Q7Z4L9 355 aa16.1■□□□□ 0.17
CTNS-201ENST00000046640 SRCIN1Q9C0H9 1055 aa16.1■□□□□ 0.17
CTNS-201ENST00000046640 ERBB4Q15303 1308 aa16.1■□□□□ 0.17
CTNS-201ENST00000046640 ADGRL3Q9HAR2 1447 aa16.09■□□□□ 0.17
CTNS-201ENST00000046640 PROSER3Q2NL68 480 aa16.09■□□□□ 0.17
CTNS-201ENST00000046640 NOL8Q76FK4 1167 aaKnown RBP16.09■□□□□ 0.17
CTNS-201ENST00000046640 ARHGEF25Q86VW2 580 aa16.09■□□□□ 0.17
CTNS-201ENST00000046640 UNC5CLQ8IV45 518 aa16.09■□□□□ 0.17
CTNS-201ENST00000046640 CABLES1Q8TDN4 633 aa16.09■□□□□ 0.17
CTNS-201ENST00000046640 SRGAP3O43295 1099 aa16.09■□□□□ 0.17
CTNS-201ENST00000046640 AIMP1Q12904 312 aaKnown RBP16.09■□□□□ 0.17
CTNS-201ENST00000046640 LTN1O94822 1766 aa16.08■□□□□ 0.17
CTNS-201ENST00000046640 AKAP4Q5JQC9 854 aa16.08■□□□□ 0.16
CTNS-201ENST00000046640 FOXD4L5Q5VV16 416 aaPredicted RBP16.08■□□□□ 0.16
CTNS-201ENST00000046640 FOXD4L4Q8WXT5 416 aaPredicted RBP16.08■□□□□ 0.16
CTNS-201ENST00000046640 ERC2O15083 957 aa16.08■□□□□ 0.16
CTNS-201ENST00000046640 DDX49Q9Y6V7 483 aaKnown RBP16.08■□□□□ 0.16
CTNS-201ENST00000046640 CEMIPQ8WUJ3 1361 aa16.07■□□□□ 0.16
CTNS-201ENST00000046640 NPHP4O75161 1426 aaPredicted RBP16.07■□□□□ 0.16
CTNS-201ENST00000046640 SLC39A6Q13433 755 aa16.07■□□□□ 0.16
CTNS-201ENST00000046640 CHD2O14647 1828 aaKnown RBP16.07■□□□□ 0.16
CTNS-201ENST00000046640 RNMTO43148 476 aaKnown RBP16.07■□□□□ 0.16
CTNS-201ENST00000046640 RABEP1Q15276 862 aa16.07■□□□□ 0.16
CTNS-201ENST00000046640 MCTP1Q6DN14 999 aa16.07■□□□□ 0.16
CTNS-201ENST00000046640 DNAAF4Q8WXU2 420 aa16.07■□□□□ 0.16
CTNS-201ENST00000046640 NLRP2Q9NX02 1062 aa16.07■□□□□ 0.16
CTNS-201ENST00000046640 NCOA3Q9Y6Q9 1424 aa16.07■□□□□ 0.16
CTNS-201ENST00000046640 ESPNB1AK53 854 aa16.06■□□□□ 0.16
CTNS-201ENST00000046640 CLCN1P35523 988 aa16.06■□□□□ 0.16
CTNS-201ENST00000046640 PKP1Q13835 747 aa16.06■□□□□ 0.16
CTNS-201ENST00000046640 CHAMP1Q96JM3 812 aa16.06■□□□□ 0.16
CTNS-201ENST00000046640 ANO2Q9NQ90 1003 aa16.06■□□□□ 0.16
CTNS-201ENST00000046640 REC8O95072 547 aa16.06■□□□□ 0.16
CTNS-201ENST00000046640 RGPD2P0DJD1 1756 aa16.06■□□□□ 0.16
CTNS-201ENST00000046640 NFAT5O94916 1531 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms