RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 MST1RQ04912 1400 aa32.49■■■□□ 2.79
RTN4R-201ENST00000043402 ALS2Q96Q42 1657 aa32.48■■■□□ 2.79
RTN4R-201ENST00000043402 KDM3BQ7LBC6 1761 aa32.48■■■□□ 2.79
RTN4R-201ENST00000043402 GSPT1P15170 499 aaKnown RBP32.48■■■□□ 2.79
RTN4R-201ENST00000043402 EIF4A1P60842 406 aaKnown RBP32.48■■■□□ 2.79
RTN4R-201ENST00000043402 HDGFL1Q5TGJ6 251 aa32.48■■■□□ 2.79
RTN4R-201ENST00000043402 PXDNQ92626 1479 aa32.47■■■□□ 2.79
RTN4R-201ENST00000043402 MPRIPQ6WCQ1 1025 aa32.46■■■□□ 2.79
RTN4R-201ENST00000043402 TBC1D9Q6ZT07 1266 aa32.46■■■□□ 2.79
RTN4R-201ENST00000043402 RGPD5Q99666 1765 aa32.46■■■□□ 2.79
RTN4R-201ENST00000043402 KCNQ3O43525 872 aa32.46■■■□□ 2.79
RTN4R-201ENST00000043402 AMOTQ4VCS5 1084 aa32.46■■■□□ 2.79
RTN4R-201ENST00000043402 DDX17Q92841 729 aaKnown RBP32.46■■■□□ 2.79
RTN4R-201ENST00000043402 CAMTA1Q9Y6Y1 1673 aa32.45■■■□□ 2.79
RTN4R-201ENST00000043402 ATF3P18847 181 aa32.45■■■□□ 2.79
RTN4R-201ENST00000043402 OTUD7AQ8TE49 926 aaPredicted RBP32.45■■■□□ 2.79
RTN4R-201ENST00000043402 RBM25P49756 843 aaKnown RBP32.45■■■□□ 2.78
RTN4R-201ENST00000043402 SMARCA5O60264 1052 aaPredicted RBP32.44■■■□□ 2.78
RTN4R-201ENST00000043402 PHAXQ9H814 394 aaKnown RBP32.44■■■□□ 2.78
RTN4R-201ENST00000043402 GNAI2P04899 355 aa32.43■■■□□ 2.78
RTN4R-201ENST00000043402 ZC3H6P61129 1189 aaKnown RBP32.43■■■□□ 2.78
RTN4R-201ENST00000043402 APBB1O00213 710 aa32.42■■■□□ 2.78
RTN4R-201ENST00000043402 TEFQ10587 303 aa32.42■■■□□ 2.78
RTN4R-201ENST00000043402 SLKQ9H2G2 1235 aaPredicted RBP32.42■■■□□ 2.78
RTN4R-201ENST00000043402 N4BP2Q86UW6 1770 aaPredicted RBP32.41■■■□□ 2.78
RTN4R-201ENST00000043402 RNMTO43148 476 aaKnown RBP32.41■■■□□ 2.78
RTN4R-201ENST00000043402 HMMRO75330 724 aa32.41■■■□□ 2.78
RTN4R-201ENST00000043402 ANTXR1Q9H6X2 564 aa32.41■■■□□ 2.78
RTN4R-201ENST00000043402 EIF2S2P20042 333 aaKnown RBP32.41■■■□□ 2.78
RTN4R-201ENST00000043402 TTC22Q5TAA0 569 aa32.41■■■□□ 2.78
RTN4R-201ENST00000043402 BTBD11A6QL63 1104 aa32.4■■■□□ 2.78
RTN4R-201ENST00000043402 ERBB3P21860 1342 aa32.4■■■□□ 2.78
RTN4R-201ENST00000043402 DCCP43146 1447 aa32.39■■■□□ 2.78
RTN4R-201ENST00000043402 C1orf141Q5JVX7 400 aa32.39■■■□□ 2.78
RTN4R-201ENST00000043402 PXDNLA1KZ92 1463 aa32.38■■■□□ 2.77
RTN4R-201ENST00000043402 GNAI3P08754 354 aa32.38■■■□□ 2.77
RTN4R-201ENST00000043402 HOXB7P09629 217 aa32.38■■■□□ 2.77
RTN4R-201ENST00000043402 CDC45O75419 566 aa32.37■■■□□ 2.77
RTN4R-201ENST00000043402 FRAT2O75474 233 aaPredicted RBP32.36■■■□□ 2.77
RTN4R-201ENST00000043402 USP44Q9H0E7 712 aa32.36■■■□□ 2.77
RTN4R-201ENST00000043402 CHPF2Q9P2E5 772 aa32.35■■■□□ 2.77
RTN4R-201ENST00000043402 NCOA3Q9Y6Q9 1424 aa32.35■■■□□ 2.77
RTN4R-201ENST00000043402 HSPA2P54652 639 aa32.35■■■□□ 2.77
RTN4R-201ENST00000043402 PNMA6EA0A0J9YXQ4 647 aa32.34■■■□□ 2.77
RTN4R-201ENST00000043402 OVOS2A0A0G2JMS6 1433 aa32.34■■■□□ 2.77
RTN4R-201ENST00000043402 KIF2CQ99661 725 aa32.33■■■□□ 2.77
RTN4R-201ENST00000043402 ATP8B2P98198 1209 aa32.32■■■□□ 2.76
RTN4R-201ENST00000043402 EXOC6BQ9Y2D4 811 aa32.32■■■□□ 2.76
RTN4R-201ENST00000043402 LRRFIP2Q9Y608 721 aaKnown RBP32.32■■■□□ 2.76
RTN4R-201ENST00000043402 CADPS2Q86UW7 1296 aa32.31■■■□□ 2.76
RTN4R-201ENST00000043402 SPRYD3Q8NCJ5 442 aa32.29■■■□□ 2.76
RTN4R-201ENST00000043402 CABLES1Q8TDN4 633 aa32.29■■■□□ 2.76
RTN4R-201ENST00000043402 ANXA1P04083 346 aa32.29■■■□□ 2.76
RTN4R-201ENST00000043402 SDSP20132 328 aa32.28■■■□□ 2.76
RTN4R-201ENST00000043402 SIPA1L3O60292 1781 aaPredicted RBP32.28■■■□□ 2.76
RTN4R-201ENST00000043402 COL18A1P39060 1754 aa32.28■■■□□ 2.76
RTN4R-201ENST00000043402 NPHP3Q7Z494 1330 aa32.28■■■□□ 2.76
RTN4R-201ENST00000043402 HEG1Q9ULI3 1381 aa32.27■■■□□ 2.76
RTN4R-201ENST00000043402 ADAMTS7Q9UKP4 1686 aa32.27■■■□□ 2.76
RTN4R-201ENST00000043402 GIGYF1O75420 1035 aaPredicted RBP32.26■■■□□ 2.75
RTN4R-201ENST00000043402 UBTFL1P0CB47 393 aaPredicted RBP32.26■■■□□ 2.75
RTN4R-201ENST00000043402 CHMP4AQ9BY43 222 aa32.26■■■□□ 2.75
RTN4R-201ENST00000043402 SRCIN1Q9C0H9 1055 aa32.26■■■□□ 2.75
RTN4R-201ENST00000043402 NLRP2Q9NX02 1062 aa32.26■■■□□ 2.75
RTN4R-201ENST00000043402 PI4KAP2A4QPH2 592 aa32.25■■■□□ 2.75
RTN4R-201ENST00000043402 PI4KAP1Q8N8J0 262 aa32.25■■■□□ 2.75
RTN4R-201ENST00000043402 CRYBG1Q9Y4K1 1723 aa32.25■■■□□ 2.75
RTN4R-201ENST00000043402 LMTK3Q96Q04 1460 aa32.25■■■□□ 2.75
RTN4R-201ENST00000043402 SNX21Q969T3 373 aa32.25■■■□□ 2.75
RTN4R-201ENST00000043402 OSBPL3Q9H4L5 887 aa32.25■■■□□ 2.75
RTN4R-201ENST00000043402 TNS3Q68CZ2 1445 aa32.25■■■□□ 2.75
RTN4R-201ENST00000043402 HSCBQ8IWL3 235 aa32.24■■■□□ 2.75
RTN4R-201ENST00000043402 PDE1AP54750 535 aa32.24■■■□□ 2.75
RTN4R-201ENST00000043402 BEND3Q5T5X7 828 aa32.24■■■□□ 2.75
RTN4R-201ENST00000043402 DNAAF4Q8WXU2 420 aa32.24■■■□□ 2.75
RTN4R-201ENST00000043402 PRAMEF22A3QJZ6 481 aa32.23■■■□□ 2.75
RTN4R-201ENST00000043402 IBTKQ9P2D0 1353 aaPredicted RBP32.23■■■□□ 2.75
RTN4R-201ENST00000043402 SALL3Q9BXA9 1300 aa32.23■■■□□ 2.75
RTN4R-201ENST00000043402 RAPGEF4Q8WZA2 1011 aa32.22■■■□□ 2.75
RTN4R-201ENST00000043402 LRRCC1Q9C099 1032 aa32.22■■■□□ 2.75
RTN4R-201ENST00000043402 ADCY9O60503 1353 aa32.22■■■□□ 2.75
RTN4R-201ENST00000043402 DBF4Q9UBU7 674 aaPredicted RBP32.22■■■□□ 2.75
RTN4R-201ENST00000043402 XIRP1Q702N8 1843 aaKnown RBP32.21■■■□□ 2.75
RTN4R-201ENST00000043402 CHRNA2Q15822 529 aa32.21■■■□□ 2.75
RTN4R-201ENST00000043402 PROSER3Q2NL68 480 aa32.2■■■□□ 2.75
RTN4R-201ENST00000043402 SPATA31A3Q5VYP0 1347 aa32.2■■■□□ 2.74
RTN4R-201ENST00000043402 NBPF7P0C2Y1 421 aaPredicted RBP32.19■■■□□ 2.74
RTN4R-201ENST00000043402 SSH3Q8TE77 659 aa32.19■■■□□ 2.74
RTN4R-201ENST00000043402 MEGF6O75095 1541 aa32.19■■■□□ 2.74
RTN4R-201ENST00000043402 KDM6AO15550 1401 aaPredicted RBP32.18■■■□□ 2.74
RTN4R-201ENST00000043402 RBM42Q9BTD8 480 aaKnown RBP32.18■■■□□ 2.74
RTN4R-201ENST00000043402 CD2BP2O95400 341 aaKnown RBP32.17■■■□□ 2.74
RTN4R-201ENST00000043402 TATP17735 454 aaPredicted RBP32.17■■■□□ 2.74
RTN4R-201ENST00000043402 TSHZ3Q63HK5 1081 aa32.17■■■□□ 2.74
RTN4R-201ENST00000043402 PPP1R42Q7Z4L9 355 aa32.16■■■□□ 2.74
RTN4R-201ENST00000043402 SCN11AQ9UI33 1791 aa32.16■■■□□ 2.74
RTN4R-201ENST00000043402 PHKG2P15735 406 aa32.15■■■□□ 2.74
RTN4R-201ENST00000043402 USP26Q9BXU7 913 aa32.15■■■□□ 2.74
RTN4R-201ENST00000043402 CSB-PGBD3P0DP91 1061 aa32.15■■■□□ 2.74
RTN4R-201ENST00000043402 POLA2Q14181 598 aa32.14■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms