RNA–Protein interactions for RNA: ENSMUST00000162057.7

Cldnd1-204, Transcript of Claudin domain-containing protein 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Cldnd1, Length 1,540 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1-204ENSMUST00000162057 Smg7Q5RJH6 1138 aaKnown RBP28.61■■■□□ 2.17
Cldnd1-204ENSMUST00000162057 Gas2l2Q5SSG4 860 aa28.61■■■□□ 2.17
Cldnd1-204ENSMUST00000162057 Kiaa0319lQ8K135 1048 aa28.61■■■□□ 2.17
Cldnd1-204ENSMUST00000162057 Erbb3Q61526 1339 aa28.61■■■□□ 2.17
Cldnd1-204ENSMUST00000162057 1700019A02RikA0A087WPV9 146 aa28.6■■■□□ 2.17
Cldnd1-204ENSMUST00000162057 Eif4a1P60843 406 aaKnown RBP28.6■■■□□ 2.17
Cldnd1-204ENSMUST00000162057 Cap2Q9CYT6 476 aa28.6■■■□□ 2.17
Cldnd1-204ENSMUST00000162057 Irx6Q9ER75 438 aa28.6■■■□□ 2.17
Cldnd1-204ENSMUST00000162057 Dcaf5Q80T85 946 aa28.58■■■□□ 2.17
Cldnd1-204ENSMUST00000162057 Ccar1Q8CH18 1146 aaKnown RBP28.58■■■□□ 2.17
Cldnd1-204ENSMUST00000162057 Snapc4Q8BP86 1333 aa28.57■■■□□ 2.16
Cldnd1-204ENSMUST00000162057 TefQ9JLC6 301 aa28.56■■■□□ 2.16
Cldnd1-204ENSMUST00000162057 Adcy9P51830 1353 aa28.55■■■□□ 2.16
Cldnd1-204ENSMUST00000162057 Q8BT18 775 aa28.55■■■□□ 2.16
Cldnd1-204ENSMUST00000162057 Tnnt1O88346 262 aa28.54■■■□□ 2.16
Cldnd1-204ENSMUST00000162057 CastP51125 788 aa28.54■■■□□ 2.16
Cldnd1-204ENSMUST00000162057 Q3TQI7 289 aaKnown RBP28.54■■■□□ 2.16
Cldnd1-204ENSMUST00000162057 Chpf2Q3UU43 768 aa28.54■■■□□ 2.16
Cldnd1-204ENSMUST00000162057 Cyp2d12Q8BVD2 504 aa28.54■■■□□ 2.16
Cldnd1-204ENSMUST00000162057 Ric1Q69ZJ7 1422 aa28.54■■■□□ 2.16
Cldnd1-204ENSMUST00000162057 Iqsec3Q3TES0 1195 aa28.53■■■□□ 2.16
Cldnd1-204ENSMUST00000162057 Hmgb2P30681 210 aaKnown RBP28.53■■■□□ 2.16
Cldnd1-204ENSMUST00000162057 PigbQ9JJQ0 542 aa28.53■■■□□ 2.16
Cldnd1-204ENSMUST00000162057 Msh6P54276 1358 aaKnown RBP28.52■■■□□ 2.16
Cldnd1-204ENSMUST00000162057 Plekhh1Q80TI1 1356 aa28.52■■■□□ 2.16
Cldnd1-204ENSMUST00000162057 Apba2P98084 750 aa28.52■■■□□ 2.16
Cldnd1-204ENSMUST00000162057 Atf5O70191 283 aa28.51■■■□□ 2.15
Cldnd1-204ENSMUST00000162057 Pim2Q62070 370 aa28.51■■■□□ 2.15
Cldnd1-204ENSMUST00000162057 Ankrd13dQ6PD24 605 aa28.51■■■□□ 2.15
Cldnd1-204ENSMUST00000162057 BcorQ8CGN4 1759 aa28.51■■■□□ 2.15
Cldnd1-204ENSMUST00000162057 Pde4dQ01063 747 aa28.5■■■□□ 2.15
Cldnd1-204ENSMUST00000162057 Cnnm1Q0GA42 951 aa28.5■■■□□ 2.15
Cldnd1-204ENSMUST00000162057 Flad1Q8R123 492 aa28.5■■■□□ 2.15
Cldnd1-204ENSMUST00000162057 GckrQ91X44 587 aa28.49■■■□□ 2.15
Cldnd1-204ENSMUST00000162057 Taf7Q9R1C0 341 aa28.49■■■□□ 2.15
Cldnd1-204ENSMUST00000162057 Bicdl1A0JNT9 577 aa28.48■■■□□ 2.15
Cldnd1-204ENSMUST00000162057 Trim26Q99PN3 545 aa28.48■■■□□ 2.15
Cldnd1-204ENSMUST00000162057 Cers3Q1A3B0 383 aa28.48■■■□□ 2.15
Cldnd1-204ENSMUST00000162057 Mylk2Q8VCR8 613 aa28.48■■■□□ 2.15
Cldnd1-204ENSMUST00000162057 Kank1E9Q238 1360 aa28.47■■■□□ 2.15
Cldnd1-204ENSMUST00000162057 Vamp4O70480 141 aa28.46■■■□□ 2.15
Cldnd1-204ENSMUST00000162057 Fkbp4P30416 458 aa28.46■■■□□ 2.15
Cldnd1-204ENSMUST00000162057 Znf710Q3U288 666 aa28.46■■■□□ 2.15
Cldnd1-204ENSMUST00000162057 Tmem119Q8R138 280 aa28.46■■■□□ 2.15
Cldnd1-204ENSMUST00000162057 Ccdc171E9Q1U1 1324 aa28.46■■■□□ 2.15
Cldnd1-204ENSMUST00000162057 Gm6268A2A3U9 297 aa28.44■■■□□ 2.14
Cldnd1-204ENSMUST00000162057 PsapQ61207 557 aaKnown RBP28.44■■■□□ 2.14
Cldnd1-204ENSMUST00000162057 Polr3glQ8R0C0 218 aa28.44■■■□□ 2.14
Cldnd1-204ENSMUST00000162057 C4bP01029 1738 aa28.44■■■□□ 2.14
Cldnd1-204ENSMUST00000162057 Pdia6Q922R8 440 aaKnown RBP28.43■■■□□ 2.14
Cldnd1-204ENSMUST00000162057 Bcl2l13P59017 434 aa28.43■■■□□ 2.14
Cldnd1-204ENSMUST00000162057 Ccdc60Q8C4J0 545 aa28.43■■■□□ 2.14
Cldnd1-204ENSMUST00000162057 OscarQ8VBT3 265 aa28.43■■■□□ 2.14
Cldnd1-204ENSMUST00000162057 CoblQ5NBX1 1337 aaKnown RBP28.42■■■□□ 2.14
Cldnd1-204ENSMUST00000162057 Prkab2Q6PAM0 271 aa28.41■■■□□ 2.14
Cldnd1-204ENSMUST00000162057 Ttc41Q692V3 1318 aa28.41■■■□□ 2.14
Cldnd1-204ENSMUST00000162057 Smarcc1P97496 1104 aa28.4■■■□□ 2.14
Cldnd1-204ENSMUST00000162057 KarsQ99MN1 595 aaKnown RBP28.4■■■□□ 2.14
Cldnd1-204ENSMUST00000162057 Syde2E9PUP1 1314 aa28.39■■■□□ 2.14
Cldnd1-204ENSMUST00000162057 MetP16056 1379 aa28.39■■■□□ 2.14
Cldnd1-204ENSMUST00000162057 Miga2Q8BK03 593 aa28.38■■■□□ 2.13
Cldnd1-204ENSMUST00000162057 DiexfQ8BTT6 772 aaKnown RBP28.38■■■□□ 2.13
Cldnd1-204ENSMUST00000162057 SympkQ80X82 1284 aa28.38■■■□□ 2.13
Cldnd1-204ENSMUST00000162057 Eif5bQ05D44 1216 aaKnown RBP28.37■■■□□ 2.13
Cldnd1-204ENSMUST00000162057 Gm12185Q5NCB2 835 aa28.37■■■□□ 2.13
Cldnd1-204ENSMUST00000162057 Morc2aQ69ZX6 1030 aa28.36■■■□□ 2.13
Cldnd1-204ENSMUST00000162057 Col4a1P02463 1669 aa28.36■■■□□ 2.13
Cldnd1-204ENSMUST00000162057 Erbb4Q61527 1308 aa28.35■■■□□ 2.13
Cldnd1-204ENSMUST00000162057 Cypt1Q8CH20 168 aa28.35■■■□□ 2.13
Cldnd1-204ENSMUST00000162057 Gm13023A2A8N2 498 aa28.34■■■□□ 2.13
Cldnd1-204ENSMUST00000162057 G3bp1P97855 465 aaKnown RBP28.34■■■□□ 2.13
Cldnd1-204ENSMUST00000162057 Cnksr1A2A9K7 700 aa28.33■■■□□ 2.13
Cldnd1-204ENSMUST00000162057 Chl1P70232 1209 aa28.33■■■□□ 2.13
Cldnd1-204ENSMUST00000162057 Clcn1Q64347 994 aa28.33■■■□□ 2.13
Cldnd1-204ENSMUST00000162057 Upf2A2AT37 1269 aaKnown RBP28.32■■■□□ 2.12
Cldnd1-204ENSMUST00000162057 Cavin2Q63918 418 aaKnown RBP28.32■■■□□ 2.12
Cldnd1-204ENSMUST00000162057 L3mbtl2P59178 703 aa28.31■■■□□ 2.12
Cldnd1-204ENSMUST00000162057 Plekhm2Q80TQ5 1018 aa28.31■■■□□ 2.12
Cldnd1-204ENSMUST00000162057 Slc39a6Q8C145 765 aa28.31■■■□□ 2.12
Cldnd1-204ENSMUST00000162057 Nip7Q9CXK8 180 aaKnown RBP28.31■■■□□ 2.12
Cldnd1-204ENSMUST00000162057 Sipa1l3G3X9J0 1776 aa28.3■■■□□ 2.12
Cldnd1-204ENSMUST00000162057 Kdm2bQ6P1G2 1309 aa28.29■■■□□ 2.12
Cldnd1-204ENSMUST00000162057 Zbtb1Q91VL9 713 aa28.29■■■□□ 2.12
Cldnd1-204ENSMUST00000162057 Ubr3Q5U430 1889 aa28.29■■■□□ 2.12
Cldnd1-204ENSMUST00000162057 Ddx60E9PZQ1 1711 aa28.28■■■□□ 2.12
Cldnd1-204ENSMUST00000162057 Sv2bQ8BG39 683 aa28.28■■■□□ 2.12
Cldnd1-204ENSMUST00000162057 Gigyf1Q99MR1 1044 aaKnown RBP28.28■■■□□ 2.12
Cldnd1-204ENSMUST00000162057 VirmaA2AIV2 1811 aaKnown RBP28.28■■■□□ 2.12
Cldnd1-204ENSMUST00000162057 CoilQ5SU73 570 aa28.28■■■□□ 2.12
Cldnd1-204ENSMUST00000162057 Trim52Q8CDV4 233 aa28.28■■■□□ 2.12
Cldnd1-204ENSMUST00000162057 Lama4P97927 1816 aa28.27■■■□□ 2.12
Cldnd1-204ENSMUST00000162057 Fam198bQ3UPI1 517 aa28.27■■■□□ 2.12
Cldnd1-204ENSMUST00000162057 Rangap1P46061 589 aaKnown RBP28.26■■■□□ 2.11
Cldnd1-204ENSMUST00000162057 Fam83gQ5SWY7 812 aa28.26■■■□□ 2.11
Cldnd1-204ENSMUST00000162057 Tmco5bQ80X59 307 aa28.26■■■□□ 2.11
Cldnd1-204ENSMUST00000162057 Lrrc43Q3V0L5 667 aa28.25■■■□□ 2.11
Cldnd1-204ENSMUST00000162057 MeiocA2AG06 965 aa28.24■■■□□ 2.11
Cldnd1-204ENSMUST00000162057 Ezh2Q61188 746 aaKnown RBP28.23■■■□□ 2.11
Cldnd1-204ENSMUST00000162057 Rapgef4Q9EQZ6 1011 aa28.23■■■□□ 2.11
Cldnd1-204ENSMUST00000162057 Prr29B1ARI9 187 aa28.23■■■□□ 2.11
Retrieved 100 of 22,080 RNA–protein pairs in 17.2 ms