RNA–Protein interactions for RNA: ENSMUST00000115537.1

Col28a1-201, Transcript of Collagen alpha-1(XXVIII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col28a1, Length 4,230 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1-201ENSMUST00000115537 Rbm5Q91YE7 815 aaKnown RBP10.54□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Brd1E9PZ26 1189 aaKnown RBP10.53□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Cadps2Q8BYR5 1297 aa10.53□□□□□ -0.72
Col28a1-201ENSMUST00000115537 BbxQ8VBW5 907 aa10.53□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Klc3Q91W40 508 aa10.53□□□□□ -0.72
Col28a1-201ENSMUST00000115537 AglF8VPN4 1532 aa10.53□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Ddit3P35639 168 aa10.53□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Cpa2Q504N0 417 aa10.53□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Tex14Q7M6U3 1450 aa10.53□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Slc35g1Q8BY79 368 aa10.53□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Wdr17E9Q271 1322 aa10.52□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Plch2A2AP18 1501 aa10.52□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Map4k4P97820 1233 aaKnown RBP10.52□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Wwc1Q5SXA9 1104 aa10.52□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Btbd11Q6GQW0 1109 aa10.52□□□□□ -0.72
Col28a1-201ENSMUST00000115537 Sv2bQ8BG39 683 aa10.52□□□□□ -0.72
Col28a1-201ENSMUST00000115537 CarsQ9ER72 831 aaKnown RBP10.52□□□□□ -0.72
Col28a1-201ENSMUST00000115537 NmiO35309 314 aa10.52□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Smim5Q8BT42 78 aa10.52□□□□□ -0.73
Col28a1-201ENSMUST00000115537 OptnQ8K3K8 584 aa10.52□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Rbm42Q91V81 474 aaKnown RBP10.52□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Kif24Q6NWW5 1356 aa10.52□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Bach2P97303 839 aa10.51□□□□□ -0.73
Col28a1-201ENSMUST00000115537 PsapQ61207 557 aaKnown RBP10.51□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Smc4Q8CG47 1286 aa10.51□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Mmel1Q9JLI3 765 aa10.51□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Fam135bQ9DAI6 1403 aa10.51□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Uggt2E9Q4X2 1504 aa10.51□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Q4VA45 678 aa10.51□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Samm50Q8BGH2 469 aa10.51□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Ric3Q8BPM6 367 aa10.51□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Fhod3Q76LL6 1578 aa10.51□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Triml2E9PW10 424 aa10.51□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Ift57Q8BXG3 429 aa10.51□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Pnma3Q8JZW8 466 aa10.51□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Ddb1Q3U1J4 1140 aaKnown RBP10.5□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Gnl3lQ6PGG6 577 aaKnown RBP10.5□□□□□ -0.73
Col28a1-201ENSMUST00000115537 KinQ8K339 391 aa10.5□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Kif2cQ922S8 721 aa10.5□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Nlgn1Q99K10 843 aa10.5□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Hmgn5Q9JL35 406 aa10.5□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Cpsf1Q9EPU4 1441 aaKnown RBP10.5□□□□□ -0.73
Col28a1-201ENSMUST00000115537 CebpzP53569 1052 aaKnown RBP10.5□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Ncbp1Q3UYV9 790 aaKnown RBP10.5□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Otud6bQ8K2H2 294 aa10.5□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Ncapd2Q8K2Z4 1392 aa10.5□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Arhgef1Q61210 920 aaKnown RBP10.5□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Bms1Q6PGF5 1284 aaKnown RBP10.5□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Kdm5cP41230 1554 aa10.49□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Arglu1Q3UL36 271 aaKnown RBP10.49□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Nckap5lQ6GQX2 1323 aa10.49□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Arid4aF8VPQ2 1261 aaKnown RBP10.49□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Mcm3P25206 812 aaKnown RBP10.49□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Ankrd13dQ6PD24 605 aa10.49□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Mphosph10Q810V0 681 aaKnown RBP10.49□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Gdpd2Q9ESM6 539 aa10.49□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Gm9992B2RWK3 458 aa10.49□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Strn4P58404 760 aa10.49□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Unc93aQ710D3 458 aa10.49□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Cchcr1Q8K2I2 770 aa10.49□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Klf15Q9EPW2 415 aa10.49□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Ccdc171E9Q1U1 1324 aa10.49□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Mcm2P97310 904 aa10.48□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Babam1Q3UI43 333 aa10.48□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Fchsd2Q3USJ8 740 aa10.48□□□□□ -0.73
Col28a1-201ENSMUST00000115537 CenpqQ9CPQ5 267 aa10.48□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Sh3bgrQ9WUZ7 214 aa10.48□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Ercc6l2Q9JIM3 1537 aa10.48□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Ppp1r3fQ9JIG4 799 aa10.48□□□□□ -0.73
Col28a1-201ENSMUST00000115537 PdcQ9QW08 244 aa10.48□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Tarbp1E9Q368 1579 aa10.48□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Serpinb6bO08804 377 aa10.48□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Ccnl1Q52KE7 532 aaKnown RBP10.48□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Erc2Q6PH08 957 aa10.48□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Jmjd4Q8BFT6 427 aa10.48□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Robo2Q7TPD3 1470 aa10.48□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Eif4a2P10630 407 aa10.47□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Trap1aP19473 224 aa10.47□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Tbc1d31Q6NXY1 996 aa10.47□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Nap1l3Q794H2 544 aa10.47□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Gcc1Q9D4H2 778 aa10.47□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Dnajc2P54103 621 aaKnown RBP10.47□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Tpm1P58771 284 aa10.47□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Med4Q9CQA5 270 aa10.47□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Sytl4Q9R0Q1 673 aa10.47□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Tbc1d8Q9Z1A9 1134 aa10.47□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Nyap1Q6PFX7 833 aa10.47□□□□□ -0.73
Col28a1-201ENSMUST00000115537 AnlnQ8K298 1121 aaKnown RBP10.47□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Mad1l1Q9WTX8 717 aaKnown RBP10.47□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Znf521Q6KAS7 1311 aa10.47□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Brpf1B2RRD7 1212 aa10.47□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Smc3Q9CW03 1217 aaKnown RBP10.47□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Gprasp1Q5U4C1 1347 aa10.46□□□□□ -0.73
Col28a1-201ENSMUST00000115537 CrklP47941 303 aa10.46□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Nxf2Q4ZGD8 691 aa10.46□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Cwc15Q9JHS9 229 aaKnown RBP10.46□□□□□ -0.73
Col28a1-201ENSMUST00000115537 Eya1P97767 591 aa10.46□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Q8C5K5 320 aa10.46□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Rapgef4Q9EQZ6 1011 aa10.46□□□□□ -0.74
Col28a1-201ENSMUST00000115537 Kif21bQ9QXL1 1668 aa10.46□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 9.3 ms