RNA–Protein interactions for RNA: ENSMUST00000110522.9

Trim9-202, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-202ENSMUST00000110522 EvcP57680 1005 aa13.41□□□□□ -0.26
Trim9-202ENSMUST00000110522 Odf2lQ9D478 642 aa13.41□□□□□ -0.26
Trim9-202ENSMUST00000110522 Catsper2A2ARP9 588 aa13.41□□□□□ -0.26
Trim9-202ENSMUST00000110522 Pa2g4P50580 394 aaKnown RBP13.41□□□□□ -0.26
Trim9-202ENSMUST00000110522 Gsdma2Q32M21 443 aa13.41□□□□□ -0.26
Trim9-202ENSMUST00000110522 Taok2Q6ZQ29 1240 aa13.41□□□□□ -0.26
Trim9-202ENSMUST00000110522 Fsd1Q7TPM6 496 aa13.41□□□□□ -0.26
Trim9-202ENSMUST00000110522 Amotl1Q9D4H4 968 aa13.41□□□□□ -0.26
Trim9-202ENSMUST00000110522 Astn2Q80Z10 1352 aa13.41□□□□□ -0.26
Trim9-202ENSMUST00000110522 Nsd3Q6P2L6 1439 aa13.41□□□□□ -0.26
Trim9-202ENSMUST00000110522 Kif14L0N7N1 1674 aaKnown RBP13.41□□□□□ -0.26
Trim9-202ENSMUST00000110522 LifrP42703 1092 aa13.41□□□□□ -0.26
Trim9-202ENSMUST00000110522 Cavin2Q63918 418 aaKnown RBP13.41□□□□□ -0.26
Trim9-202ENSMUST00000110522 Spty2d1Q68FG3 682 aa13.41□□□□□ -0.26
Trim9-202ENSMUST00000110522 GckrQ91X44 587 aa13.41□□□□□ -0.26
Trim9-202ENSMUST00000110522 Mapk8ip1Q9WVI9 707 aa13.41□□□□□ -0.26
Trim9-202ENSMUST00000110522 Pprc1Q6NZN1 1644 aa13.4□□□□□ -0.26
Trim9-202ENSMUST00000110522 Mcm4P49717 862 aa13.4□□□□□ -0.26
Trim9-202ENSMUST00000110522 Lmbr1lQ9D1E5 489 aa13.4□□□□□ -0.26
Trim9-202ENSMUST00000110522 Adgrl3Q80TS3 1537 aa13.4□□□□□ -0.26
Trim9-202ENSMUST00000110522 Anapc15-psA0A140T8L6 141 aa13.4□□□□□ -0.26
Trim9-202ENSMUST00000110522 Kif20aP97329 887 aa13.4□□□□□ -0.26
Trim9-202ENSMUST00000110522 Gtf2f1Q3THK3 508 aaKnown RBP13.4□□□□□ -0.26
Trim9-202ENSMUST00000110522 Myd88P22366 296 aa13.4□□□□□ -0.27
Trim9-202ENSMUST00000110522 Igflr1Q3U4N7 345 aa13.4□□□□□ -0.27
Trim9-202ENSMUST00000110522 NgdnQ9DB96 315 aaKnown RBP13.4□□□□□ -0.27
Trim9-202ENSMUST00000110522 Ppfia3P60469 1194 aa13.39□□□□□ -0.27
Trim9-202ENSMUST00000110522 Mum1Q6DID5 682 aa13.39□□□□□ -0.27
Trim9-202ENSMUST00000110522 Nlrp3Q8R4B8 1033 aa13.39□□□□□ -0.27
Trim9-202ENSMUST00000110522 Pdia3P27773 505 aaKnown RBP13.39□□□□□ -0.27
Trim9-202ENSMUST00000110522 Kif1bQ60575 1816 aaKnown RBP13.38□□□□□ -0.27
Trim9-202ENSMUST00000110522 Syce3B5KM66 88 aa13.38□□□□□ -0.27
Trim9-202ENSMUST00000110522 Ell2Q3UKU1 639 aa13.38□□□□□ -0.27
Trim9-202ENSMUST00000110522 Elp1Q7TT37 1333 aaKnown RBP13.38□□□□□ -0.27
Trim9-202ENSMUST00000110522 Tceanc2Q8R2M0 207 aa13.38□□□□□ -0.27
Trim9-202ENSMUST00000110522 Usp19Q3UJD6 1360 aa13.38□□□□□ -0.27
Trim9-202ENSMUST00000110522 Cfap65Q3V0B4 1847 aa13.38□□□□□ -0.27
Trim9-202ENSMUST00000110522 Atp8b2P98199 1209 aa13.38□□□□□ -0.27
Trim9-202ENSMUST00000110522 Ddx58Q6Q899 926 aa13.38□□□□□ -0.27
Trim9-202ENSMUST00000110522 P2rx7Q9Z1M0 595 aa13.38□□□□□ -0.27
Trim9-202ENSMUST00000110522 Zeb2Q9R0G7 1215 aa13.38□□□□□ -0.27
Trim9-202ENSMUST00000110522 Tulp4Q9JIL5 1547 aa13.37□□□□□ -0.27
Trim9-202ENSMUST00000110522 Tbc1d7Q9D0K0 293 aa13.37□□□□□ -0.27
Trim9-202ENSMUST00000110522 Fam135bQ9DAI6 1403 aa13.37□□□□□ -0.27
Trim9-202ENSMUST00000110522 KdrP35918 1367 aa13.37□□□□□ -0.27
Trim9-202ENSMUST00000110522 Samm50Q8BGH2 469 aa13.37□□□□□ -0.27
Trim9-202ENSMUST00000110522 Olfml1Q8BSH2 233 aa13.37□□□□□ -0.27
Trim9-202ENSMUST00000110522 Slc39a6Q8C145 765 aa13.37□□□□□ -0.27
Trim9-202ENSMUST00000110522 Pms1Q8K119 917 aa13.37□□□□□ -0.27
Trim9-202ENSMUST00000110522 GptQ8QZR5 496 aa13.37□□□□□ -0.27
Trim9-202ENSMUST00000110522 Synj2Q9D2G5 1434 aa13.37□□□□□ -0.27
Trim9-202ENSMUST00000110522 Erc1Q99MI1 1120 aa13.36□□□□□ -0.27
Trim9-202ENSMUST00000110522 Gabpb2P81069 414 aa13.36□□□□□ -0.27
Trim9-202ENSMUST00000110522 Ddx17Q501J6 650 aaKnown RBP13.36□□□□□ -0.27
Trim9-202ENSMUST00000110522 EappQ5BU09 281 aa13.36□□□□□ -0.27
Trim9-202ENSMUST00000110522 Stk38Q91VJ4 465 aa13.36□□□□□ -0.27
Trim9-202ENSMUST00000110522 Polr3dQ91WD1 398 aa13.36□□□□□ -0.27
Trim9-202ENSMUST00000110522 TbcaP48428 108 aaKnown RBP13.36□□□□□ -0.27
Trim9-202ENSMUST00000110522 Klf15Q9EPW2 415 aa13.36□□□□□ -0.27
Trim9-202ENSMUST00000110522 Depdc5P61460 1591 aa13.36□□□□□ -0.27
Trim9-202ENSMUST00000110522 Trim28Q62318 834 aa13.36□□□□□ -0.27
Trim9-202ENSMUST00000110522 Ankle2Q6P1H6 964 aa13.36□□□□□ -0.27
Trim9-202ENSMUST00000110522 Sugp2Q8CH09 1067 aa13.36□□□□□ -0.27
Trim9-202ENSMUST00000110522 Slain2Q8CI08 581 aa13.36□□□□□ -0.27
Trim9-202ENSMUST00000110522 Cep57l1Q8VDS7 400 aa13.36□□□□□ -0.27
Trim9-202ENSMUST00000110522 Zbtb22Q9Z0G7 638 aa13.36□□□□□ -0.27
Trim9-202ENSMUST00000110522 Mbd5B1AYB6 1498 aa13.35□□□□□ -0.27
Trim9-202ENSMUST00000110522 Pde4bB1AWC9 736 aa13.35□□□□□ -0.27
Trim9-202ENSMUST00000110522 Rasa1E9PYG6 1038 aa13.35□□□□□ -0.27
Trim9-202ENSMUST00000110522 Zbtb45Q52KG4 520 aa13.35□□□□□ -0.27
Trim9-202ENSMUST00000110522 Golim4Q8BXA1 655 aa13.35□□□□□ -0.27
Trim9-202ENSMUST00000110522 ScaperF8VQ70 1398 aaKnown RBP13.35□□□□□ -0.27
Trim9-202ENSMUST00000110522 Grm8P47743 908 aa13.35□□□□□ -0.27
Trim9-202ENSMUST00000110522 Gigyf1Q99MR1 1044 aaKnown RBP13.35□□□□□ -0.27
Trim9-202ENSMUST00000110522 Myo3aQ8K3H5 1613 aa13.35□□□□□ -0.27
Trim9-202ENSMUST00000110522 Ddx46Q569Z5 1032 aaKnown RBP13.35□□□□□ -0.27
Trim9-202ENSMUST00000110522 PdcQ9QW08 244 aa13.35□□□□□ -0.27
Trim9-202ENSMUST00000110522 PzpQ61838 1495 aa13.35□□□□□ -0.27
Trim9-202ENSMUST00000110522 Gnat3Q3V3I2 354 aa13.34□□□□□ -0.27
Trim9-202ENSMUST00000110522 ThemisQ8BGW0 636 aa13.34□□□□□ -0.27
Trim9-202ENSMUST00000110522 Fsd2Q8BZ52 692 aa13.34□□□□□ -0.27
Trim9-202ENSMUST00000110522 AidaQ8C4Q6 305 aa13.34□□□□□ -0.27
Trim9-202ENSMUST00000110522 Efcab2Q9CQ46 164 aa13.34□□□□□ -0.27
Trim9-202ENSMUST00000110522 Dnmt1P13864 1620 aaKnown RBP13.34□□□□□ -0.27
Trim9-202ENSMUST00000110522 Fhod3Q76LL6 1578 aa13.34□□□□□ -0.27
Trim9-202ENSMUST00000110522 Hoxa7P02830 229 aa13.34□□□□□ -0.27
Trim9-202ENSMUST00000110522 Prl7d1P04769 244 aa13.34□□□□□ -0.27
Trim9-202ENSMUST00000110522 Kdm4aQ8BW72 1064 aa13.34□□□□□ -0.27
Trim9-202ENSMUST00000110522 CenppQ9CZ92 286 aa13.34□□□□□ -0.27
Trim9-202ENSMUST00000110522 Taf7Q9R1C0 341 aa13.34□□□□□ -0.27
Trim9-202ENSMUST00000110522 F2rP30558 430 aa13.34□□□□□ -0.27
Trim9-202ENSMUST00000110522 Prkab2Q6PAM0 271 aa13.34□□□□□ -0.27
Trim9-202ENSMUST00000110522 Jmjd4Q8BFT6 427 aa13.34□□□□□ -0.27
Trim9-202ENSMUST00000110522 Aldh8a1Q8BH00 487 aa13.34□□□□□ -0.27
Trim9-202ENSMUST00000110522 Tmem67Q8BR76 992 aa13.34□□□□□ -0.27
Trim9-202ENSMUST00000110522 Bag4Q8CI61 457 aa13.34□□□□□ -0.27
Trim9-202ENSMUST00000110522 Ubxn4Q8VCH8 506 aa13.34□□□□□ -0.27
Trim9-202ENSMUST00000110522 Cdc42bpaQ3UU96 1719 aa13.34□□□□□ -0.27
Trim9-202ENSMUST00000110522 Mcmdc2E9Q956 681 aa13.33□□□□□ -0.27
Trim9-202ENSMUST00000110522 Ccnl1Q52KE7 532 aaKnown RBP13.33□□□□□ -0.27
Retrieved 100 of 22,080 RNA–protein pairs in 75 ms