RNA–Protein interactions for RNA: ENSMUST00000107934.1

Shank1-201, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-201ENSMUST00000107934 Rfx7F8VPJ6 1459 aa18.35■□□□□ 0.53
Shank1-201ENSMUST00000107934 Mapkbp1Q6NS57 1503 aa18.35■□□□□ 0.53
Shank1-201ENSMUST00000107934 Fam135aQ6NS59 1506 aa18.35■□□□□ 0.53
Shank1-201ENSMUST00000107934 ItpripQ3TNL8 555 aa18.35■□□□□ 0.53
Shank1-201ENSMUST00000107934 Lrrfip1Q3UZ39 729 aaKnown RBP18.35■□□□□ 0.53
Shank1-201ENSMUST00000107934 ZwintQ9CQU5 252 aa18.35■□□□□ 0.53
Shank1-201ENSMUST00000107934 Gjb2Q00977 226 aa18.34■□□□□ 0.53
Shank1-201ENSMUST00000107934 Gapvd1Q6PAR5 1458 aa18.34■□□□□ 0.53
Shank1-201ENSMUST00000107934 Slc7a3P70423 618 aa18.34■□□□□ 0.53
Shank1-201ENSMUST00000107934 Nat10Q8K224 1024 aaKnown RBP18.34■□□□□ 0.53
Shank1-201ENSMUST00000107934 CenpqQ9CPQ5 267 aa18.34■□□□□ 0.53
Shank1-201ENSMUST00000107934 Mcm10Q0VBD2 885 aa18.34■□□□□ 0.53
Shank1-201ENSMUST00000107934 Eif4g1Q6NZJ6 1600 aaKnown RBP18.33■□□□□ 0.53
Shank1-201ENSMUST00000107934 Hmgb2P30681 210 aaKnown RBP18.33■□□□□ 0.53
Shank1-201ENSMUST00000107934 Slu7Q8BHJ9 585 aa18.33■□□□□ 0.53
Shank1-201ENSMUST00000107934 Rapgef6Q5NCJ1 1609 aa18.33■□□□□ 0.53
Shank1-201ENSMUST00000107934 Nap1l5Q9JJF0 156 aa18.33■□□□□ 0.52
Shank1-201ENSMUST00000107934 Soga3Q6NZL0 945 aa18.33■□□□□ 0.52
Shank1-201ENSMUST00000107934 Map3k2Q61083 619 aa18.33■□□□□ 0.52
Shank1-201ENSMUST00000107934 Tbc1d7Q9D0K0 293 aa18.33■□□□□ 0.52
Shank1-201ENSMUST00000107934 Cwc15Q9JHS9 229 aaKnown RBP18.32■□□□□ 0.52
Shank1-201ENSMUST00000107934 Aplp1Q03157 653 aa18.32■□□□□ 0.52
Shank1-201ENSMUST00000107934 Ccdc102aQ3TMW1 549 aa18.32■□□□□ 0.52
Shank1-201ENSMUST00000107934 Gimap5Q8BWF2 308 aa18.32■□□□□ 0.52
Shank1-201ENSMUST00000107934 Egfem1Q8C088 590 aa18.32■□□□□ 0.52
Shank1-201ENSMUST00000107934 Polr3dQ91WD1 398 aa18.32■□□□□ 0.52
Shank1-201ENSMUST00000107934 Gnl2Q99LH1 728 aaKnown RBP18.32■□□□□ 0.52
Shank1-201ENSMUST00000107934 TimelessQ9R1X4 1197 aa18.32■□□□□ 0.52
Shank1-201ENSMUST00000107934 NinlQ6ZQ12 1394 aa18.32■□□□□ 0.52
Shank1-201ENSMUST00000107934 Kcnj4P52189 445 aa18.31■□□□□ 0.52
Shank1-201ENSMUST00000107934 Ifit1bl2Q3U687 466 aa18.31■□□□□ 0.52
Shank1-201ENSMUST00000107934 GptQ8QZR5 496 aa18.31■□□□□ 0.52
Shank1-201ENSMUST00000107934 Myd88P22366 296 aa18.31■□□□□ 0.52
Shank1-201ENSMUST00000107934 Exoc5Q3TPX4 708 aa18.31■□□□□ 0.52
Shank1-201ENSMUST00000107934 Slf2Q6P9P0 1278 aa18.31■□□□□ 0.52
Shank1-201ENSMUST00000107934 Tmem67Q8BR76 992 aa18.31■□□□□ 0.52
Shank1-201ENSMUST00000107934 Rbm10Q99KG3 930 aaKnown RBP18.31■□□□□ 0.52
Shank1-201ENSMUST00000107934 Chpf2Q3UU43 768 aa18.3■□□□□ 0.52
Shank1-201ENSMUST00000107934 Frmd3Q8BHD4 595 aa18.3■□□□□ 0.52
Shank1-201ENSMUST00000107934 Pik3r4Q8VD65 1358 aa18.3■□□□□ 0.52
Shank1-201ENSMUST00000107934 Bcar3Q9QZK2 820 aa18.3■□□□□ 0.52
Shank1-201ENSMUST00000107934 Stxbp4Q9WV89 557 aa18.3■□□□□ 0.52
Shank1-201ENSMUST00000107934 Spg7Q3ULF4 781 aa18.29■□□□□ 0.52
Shank1-201ENSMUST00000107934 Slx4Q6P1D7 1565 aa18.29■□□□□ 0.52
Shank1-201ENSMUST00000107934 Frmpd2A0A140LI67 1392 aa18.29■□□□□ 0.52
Shank1-201ENSMUST00000107934 Syce3B5KM66 88 aa18.29■□□□□ 0.52
Shank1-201ENSMUST00000107934 GlmnQ8BZM1 596 aa18.29■□□□□ 0.52
Shank1-201ENSMUST00000107934 Podxl2Q8CAE9 603 aa18.29■□□□□ 0.52
Shank1-201ENSMUST00000107934 Mrvi1Q9WUX5 899 aaKnown RBP18.29■□□□□ 0.52
Shank1-201ENSMUST00000107934 Rbm27Q5SFM8 1060 aaKnown RBP18.29■□□□□ 0.52
Shank1-201ENSMUST00000107934 Ccar2Q8VDP4 922 aaKnown RBP18.29■□□□□ 0.52
Shank1-201ENSMUST00000107934 Pde4dQ01063 747 aa18.28■□□□□ 0.52
Shank1-201ENSMUST00000107934 NsmfQ99NF2 532 aa18.28■□□□□ 0.52
Shank1-201ENSMUST00000107934 CastP51125 788 aa18.28■□□□□ 0.52
Shank1-201ENSMUST00000107934 Cyp7a1Q64505 503 aa18.28■□□□□ 0.52
Shank1-201ENSMUST00000107934 Mipol1Q9D9F8 279 aa18.28■□□□□ 0.52
Shank1-201ENSMUST00000107934 IncenpQ9WU62 880 aa18.28■□□□□ 0.52
Shank1-201ENSMUST00000107934 Ripply1Q2WG77 201 aa18.28■□□□□ 0.52
Shank1-201ENSMUST00000107934 Wwc1Q5SXA9 1104 aa18.28■□□□□ 0.52
Shank1-201ENSMUST00000107934 Il1rapl2Q9ERS6 686 aa18.28■□□□□ 0.52
Shank1-201ENSMUST00000107934 Ankrd26Q811D2 1581 aa18.27■□□□□ 0.52
Shank1-201ENSMUST00000107934 Gas2l3Q3UWW6 683 aa18.27■□□□□ 0.52
Shank1-201ENSMUST00000107934 Gnat3Q3V3I2 354 aa18.27■□□□□ 0.52
Shank1-201ENSMUST00000107934 Tmem87bQ8BKU8 555 aa18.27■□□□□ 0.52
Shank1-201ENSMUST00000107934 Fez1Q8K0X8 392 aa18.27■□□□□ 0.52
Shank1-201ENSMUST00000107934 Knop1Q9Z2Q2 478 aaKnown RBP18.27■□□□□ 0.51
Shank1-201ENSMUST00000107934 Wdr33Q8K4P0 1330 aaKnown RBP18.26■□□□□ 0.51
Shank1-201ENSMUST00000107934 L3mbtl2P59178 703 aa18.26■□□□□ 0.51
Shank1-201ENSMUST00000107934 Traf3ip1Q149C2 625 aa18.26■□□□□ 0.51
Shank1-201ENSMUST00000107934 Cdan1Q8CC12 1239 aa18.26■□□□□ 0.51
Shank1-201ENSMUST00000107934 Cul5Q9D5V5 780 aa18.26■□□□□ 0.51
Shank1-201ENSMUST00000107934 Cacna2d4Q5RJF7 1116 aa18.26■□□□□ 0.51
Shank1-201ENSMUST00000107934 Dzip1Q8BMD2 852 aa18.26■□□□□ 0.51
Shank1-201ENSMUST00000107934 Fancd2Q80V62 1450 aa18.26■□□□□ 0.51
Shank1-201ENSMUST00000107934 Cwc25Q9DBF7 416 aa18.26■□□□□ 0.51
Shank1-201ENSMUST00000107934 Tsg101Q61187 391 aa18.25■□□□□ 0.51
Shank1-201ENSMUST00000107934 Trim30cD3YVI9 513 aa18.25■□□□□ 0.51
Shank1-201ENSMUST00000107934 Q3UPC7 1272 aa18.25■□□□□ 0.51
Shank1-201ENSMUST00000107934 Znf131Q8K3J5 619 aa18.25■□□□□ 0.51
Shank1-201ENSMUST00000107934 Znf18Q810A1 556 aa18.25■□□□□ 0.51
Shank1-201ENSMUST00000107934 Tmem94Q7TSH8 1360 aa18.24■□□□□ 0.51
Shank1-201ENSMUST00000107934 Rad23bP54728 416 aa18.24■□□□□ 0.51
Shank1-201ENSMUST00000107934 Rnf41Q8BH75 317 aa18.24■□□□□ 0.51
Shank1-201ENSMUST00000107934 Cct2P80314 535 aaKnown RBP18.24■□□□□ 0.51
Shank1-201ENSMUST00000107934 Znf697Q569E7 569 aa18.24■□□□□ 0.51
Shank1-201ENSMUST00000107934 Trim11Q99PQ2 467 aa18.24■□□□□ 0.51
Shank1-201ENSMUST00000107934 Slc14a2Q8R4T9 930 aa18.24■□□□□ 0.51
Shank1-201ENSMUST00000107934 TxlnbQ8VBT1 685 aa18.24■□□□□ 0.51
Shank1-201ENSMUST00000107934 BicraF8VPZ9 1578 aa18.23■□□□□ 0.51
Shank1-201ENSMUST00000107934 Brms1Q99N20 246 aa18.23■□□□□ 0.51
Shank1-201ENSMUST00000107934 Smarcc1P97496 1104 aa18.23■□□□□ 0.51
Shank1-201ENSMUST00000107934 Zbtb22Q9Z0G7 638 aa18.23■□□□□ 0.51
Shank1-201ENSMUST00000107934 Olr1Q9EQ09 363 aa18.22■□□□□ 0.51
Shank1-201ENSMUST00000107934 Plagl1Q9JLQ4 704 aa18.22■□□□□ 0.51
Shank1-201ENSMUST00000107934 Camsap2Q8C1B1 1461 aa18.22■□□□□ 0.51
Shank1-201ENSMUST00000107934 Sh3d21Q7TSG5 549 aa18.22■□□□□ 0.51
Shank1-201ENSMUST00000107934 Ccdc181Q80ZU5 509 aa18.22■□□□□ 0.51
Shank1-201ENSMUST00000107934 Q9D5Q8 446 aa18.22■□□□□ 0.51
Shank1-201ENSMUST00000107934 Pafah1b1P63005 410 aaKnown RBP18.22■□□□□ 0.51
Shank1-201ENSMUST00000107934 Nfxl1E9Q8I7 918 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 22,080 RNA–protein pairs in 81.2 ms