RNA–Protein interactions for RNA: ENSMUST00000106618.7

Ttc39a-202, Transcript of Tetratricopeptide repeat protein 39A, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39a, Length 1,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39a-202ENSMUST00000106618 RgmbQ7TQ33 436 aa13.43□□□□□ -0.26
Ttc39a-202ENSMUST00000106618 Hsp90ab1P11499 724 aaKnown RBP13.43□□□□□ -0.26
Ttc39a-202ENSMUST00000106618 Tbc1d32Q3URV1 1296 aa13.43□□□□□ -0.26
Ttc39a-202ENSMUST00000106618 Ppm1gQ61074 542 aa13.43□□□□□ -0.26
Ttc39a-202ENSMUST00000106618 Aldh8a1Q8BH00 487 aa13.43□□□□□ -0.26
Ttc39a-202ENSMUST00000106618 Cadps2Q8BYR5 1297 aa13.43□□□□□ -0.26
Ttc39a-202ENSMUST00000106618 Irx6Q9ER75 438 aa13.43□□□□□ -0.26
Ttc39a-202ENSMUST00000106618 Wdr63B2RY71 923 aa13.42□□□□□ -0.26
Ttc39a-202ENSMUST00000106618 Eif4g2Q62448 906 aaKnown RBP13.42□□□□□ -0.26
Ttc39a-202ENSMUST00000106618 Eif2s2Q99L45 331 aaKnown RBP13.42□□□□□ -0.26
Ttc39a-202ENSMUST00000106618 Ubr2Q6WKZ8 1755 aa13.42□□□□□ -0.26
Ttc39a-202ENSMUST00000106618 Phkg2Q9DB30 406 aa13.41□□□□□ -0.26
Ttc39a-202ENSMUST00000106618 Txnrd1Q9JMH6 613 aa13.41□□□□□ -0.26
Ttc39a-202ENSMUST00000106618 Cgnl1Q6AW69 1298 aa13.41□□□□□ -0.26
Ttc39a-202ENSMUST00000106618 Dnai1Q8C0M8 701 aa13.41□□□□□ -0.26
Ttc39a-202ENSMUST00000106618 FanclQ9CR14 375 aa13.41□□□□□ -0.26
Ttc39a-202ENSMUST00000106618 Fkbp4P30416 458 aa13.4□□□□□ -0.26
Ttc39a-202ENSMUST00000106618 Ccdc155Q80VJ8 648 aa13.4□□□□□ -0.26
Ttc39a-202ENSMUST00000106618 KnstrnQ9D9Z1 312 aaKnown RBP13.4□□□□□ -0.26
Ttc39a-202ENSMUST00000106618 Gnai2P08752 355 aaKnown RBP13.4□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Tmem119Q8R138 280 aa13.4□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Stk36Q69ZM6 1316 aa13.39□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 GckrQ91X44 587 aa13.39□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Gcc1Q9D4H2 778 aa13.39□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Echdc1Q9D9V3 322 aa13.39□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Ccdc27Q3V036 639 aa13.38□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Ppp1r9bQ6R891 817 aaKnown RBP13.38□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Fam50bQ9WTJ8 334 aa13.38□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Chmp7Q8R1T1 451 aa13.38□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Smarca5Q91ZW3 1051 aaKnown RBP13.38□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Mfap1aC0HKD8 439 aaKnown RBP13.37□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Mfap1bC0HKD9 439 aaKnown RBP13.37□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 PsapQ61207 557 aaKnown RBP13.37□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 4930572O03RikQ8C5Y0 211 aa13.37□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Cc2d1aQ8K1A6 943 aa13.37□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Adcy9P51830 1353 aa13.37□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Atg4a-psA0A0G2JFS9 396 aa13.36□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Ccdc146E9Q9F7 977 aa13.36□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Atp8b2P98199 1209 aa13.36□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Asic4Q7TNS7 539 aa13.36□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Slx1bQ8BX32 270 aa13.36□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Atg4aQ8C9S8 396 aa13.36□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Ssfa2Q922B9 1252 aa13.36□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Atg3Q9CPX6 314 aa13.36□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Taf7Q9R1C0 341 aa13.36□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Marf1Q8BJ34 1730 aaKnown RBP13.36□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Plekhd1B2RPU2 505 aa13.36□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Bcl2l13P59017 434 aa13.36□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Mcm2P97310 904 aa13.36□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Bend3Q6PAL0 825 aa13.36□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Ppp1r42Q8R1Z4 357 aa13.36□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 ZgpatQ8VDM1 511 aa13.36□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Pdia6Q922R8 440 aaKnown RBP13.36□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Cdhr2E9Q7P9 1308 aa13.36□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 ScaperF8VQ70 1398 aaKnown RBP13.36□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Kif2cQ922S8 721 aa13.35□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Sart3Q9JLI8 962 aaKnown RBP13.35□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Flt4P35917 1363 aa13.35□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Rabep1O35551 862 aa13.34□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 SympkQ80X82 1284 aa13.34□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Srgap3Q812A2 1099 aa13.34□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Acsbg1Q99PU5 721 aa13.34□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Tjp1P39447 1745 aaKnown RBP13.34□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Mmp8O70138 465 aa13.34□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 HdgfP51859 237 aaKnown RBP13.34□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Iqsec3Q3TES0 1195 aa13.34□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Zpr1Q62384 459 aa13.34□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Nphp1Q9QY53 687 aa13.34□□□□□ -0.27
Ttc39a-202ENSMUST00000106618 Sptbn5F6UCX4 1208 aa13.33□□□□□ -0.28
Ttc39a-202ENSMUST00000106618 Zap70P43404 618 aa13.33□□□□□ -0.28
Ttc39a-202ENSMUST00000106618 Tbc1d9Q3UYK3 1264 aa13.33□□□□□ -0.28
Ttc39a-202ENSMUST00000106618 Larp1Q6ZQ58 1072 aaKnown RBP13.33□□□□□ -0.28
Ttc39a-202ENSMUST00000106618 Exoc6bA6H5Z3 810 aa13.32□□□□□ -0.28
Ttc39a-202ENSMUST00000106618 Eif3bQ8JZQ9 803 aaKnown RBP13.32□□□□□ -0.28
Ttc39a-202ENSMUST00000106618 Nek4Q9Z1J2 792 aa13.32□□□□□ -0.28
Ttc39a-202ENSMUST00000106618 Cwc27Q3TKY6 469 aa13.32□□□□□ -0.28
Ttc39a-202ENSMUST00000106618 Smim5Q8BT42 78 aa13.32□□□□□ -0.28
Ttc39a-202ENSMUST00000106618 Pard3Q99NH2 1333 aa13.31□□□□□ -0.28
Ttc39a-202ENSMUST00000106618 Map3k2Q61083 619 aa13.31□□□□□ -0.28
Ttc39a-202ENSMUST00000106618 Irf9Q61179 399 aa13.31□□□□□ -0.28
Ttc39a-202ENSMUST00000106618 CenppQ9CZ92 286 aa13.31□□□□□ -0.28
Ttc39a-202ENSMUST00000106618 Speer4bQ9D9F7 267 aa13.31□□□□□ -0.28
Ttc39a-202ENSMUST00000106618 Igfbp6P47880 238 aa13.31□□□□□ -0.28
Ttc39a-202ENSMUST00000106618 Mphosph10Q810V0 681 aaKnown RBP13.31□□□□□ -0.28
Ttc39a-202ENSMUST00000106618 Tnpo1Q8BFY9 898 aaKnown RBP13.31□□□□□ -0.28
Ttc39a-202ENSMUST00000106618 Cyp46a1Q9WVK8 500 aa13.31□□□□□ -0.28
Ttc39a-202ENSMUST00000106618 Tlr7P58681 1050 aa13.3□□□□□ -0.28
Ttc39a-202ENSMUST00000106618 Akap11E9Q777 1895 aa13.29□□□□□ -0.28
Ttc39a-202ENSMUST00000106618 Mcmdc2E9Q956 681 aa13.29□□□□□ -0.28
Ttc39a-202ENSMUST00000106618 Cfdp1O88271 295 aaKnown RBP13.29□□□□□ -0.28
Ttc39a-202ENSMUST00000106618 Ier5O89113 308 aa13.29□□□□□ -0.28
Ttc39a-202ENSMUST00000106618 HellsQ60848 821 aa13.29□□□□□ -0.28
Ttc39a-202ENSMUST00000106618 Mre11Q61216 706 aa13.29□□□□□ -0.28
Ttc39a-202ENSMUST00000106618 Prkab2Q6PAM0 271 aa13.29□□□□□ -0.28
Ttc39a-202ENSMUST00000106618 Slc5a1Q8C3K6 665 aa13.29□□□□□ -0.28
Ttc39a-202ENSMUST00000106618 PigbQ9JJQ0 542 aa13.29□□□□□ -0.28
Ttc39a-202ENSMUST00000106618 TefQ9JLC6 301 aa13.29□□□□□ -0.28
Ttc39a-202ENSMUST00000106618 Gm21663A0A0G2JE01 267 aa13.29□□□□□ -0.28
Ttc39a-202ENSMUST00000106618 Gm7361D3Z6R1 267 aa13.29□□□□□ -0.28
Ttc39a-202ENSMUST00000106618 5031410I06RikE9Q4E0 267 aa13.29□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 45.9 ms