RNA–Protein interactions for RNA: ENSMUST00000100164.4

Hoxc4-201, Transcript of Homeobox protein Hox-C4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxc4, Length 1,983 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4-201ENSMUST00000100164 Q4VA45 678 aa16.91■□□□□ 0.3
Hoxc4-201ENSMUST00000100164 Slc5a4bQ91ZP4 660 aa16.91■□□□□ 0.3
Hoxc4-201ENSMUST00000100164 Lrrc7Q80TE7 1490 aa16.9■□□□□ 0.3
Hoxc4-201ENSMUST00000100164 Olfml1Q8BSH2 233 aa16.9■□□□□ 0.3
Hoxc4-201ENSMUST00000100164 IqubQ8CDK3 788 aa16.9■□□□□ 0.3
Hoxc4-201ENSMUST00000100164 Cdc37l1Q9CZP7 335 aa16.89■□□□□ 0.3
Hoxc4-201ENSMUST00000100164 TimelessQ9R1X4 1197 aa16.89■□□□□ 0.3
Hoxc4-201ENSMUST00000100164 Ythdc1E9Q5K9 736 aaKnown RBP16.89■□□□□ 0.29
Hoxc4-201ENSMUST00000100164 Stk11ipQ3TAA7 1072 aa16.89■□□□□ 0.29
Hoxc4-201ENSMUST00000100164 NexnQ7TPW1 607 aa16.89■□□□□ 0.29
Hoxc4-201ENSMUST00000100164 Rangap1P46061 589 aaKnown RBP16.88■□□□□ 0.29
Hoxc4-201ENSMUST00000100164 Atp6v1dP57746 247 aa16.88■□□□□ 0.29
Hoxc4-201ENSMUST00000100164 Kank4Q6P9J5 1016 aa16.88■□□□□ 0.29
Hoxc4-201ENSMUST00000100164 Cdk12Q14AX6 1484 aaKnown RBP16.88■□□□□ 0.29
Hoxc4-201ENSMUST00000100164 Cbx1P83917 185 aaKnown RBP16.88■□□□□ 0.29
Hoxc4-201ENSMUST00000100164 Atp2b3Q0VF55 1220 aa16.88■□□□□ 0.29
Hoxc4-201ENSMUST00000100164 Erc2Q6PH08 957 aa16.88■□□□□ 0.29
Hoxc4-201ENSMUST00000100164 FanclQ9CR14 375 aa16.88■□□□□ 0.29
Hoxc4-201ENSMUST00000100164 Zkscan16A2ALW2 728 aa16.87■□□□□ 0.29
Hoxc4-201ENSMUST00000100164 Cavin1O54724 392 aa16.87■□□□□ 0.29
Hoxc4-201ENSMUST00000100164 Dync1i1O88485 628 aa16.87■□□□□ 0.29
Hoxc4-201ENSMUST00000100164 Tm6sf1P58749 370 aa16.87■□□□□ 0.29
Hoxc4-201ENSMUST00000100164 Nyap1Q6PFX7 833 aa16.87■□□□□ 0.29
Hoxc4-201ENSMUST00000100164 Rtf1A2AQ19 715 aaKnown RBP16.86■□□□□ 0.29
Hoxc4-201ENSMUST00000100164 Gnai1B2RSH2 354 aa16.86■□□□□ 0.29
Hoxc4-201ENSMUST00000100164 MarsQ68FL6 902 aaKnown RBP16.86■□□□□ 0.29
Hoxc4-201ENSMUST00000100164 Gnai3Q9DC51 354 aa16.86■□□□□ 0.29
Hoxc4-201ENSMUST00000100164 Rab11fip3Q8CHD8 1047 aa16.86■□□□□ 0.29
Hoxc4-201ENSMUST00000100164 Adam1bQ8R534 806 aa16.86■□□□□ 0.29
Hoxc4-201ENSMUST00000100164 SrrtQ99MR6 875 aaKnown RBP16.86■□□□□ 0.29
Hoxc4-201ENSMUST00000100164 Mx2Q9WVP9 655 aa16.86■□□□□ 0.29
Hoxc4-201ENSMUST00000100164 Qtrt2B8ZXI1 415 aa16.85■□□□□ 0.29
Hoxc4-201ENSMUST00000100164 St18Q80TY4 1045 aa16.85■□□□□ 0.29
Hoxc4-201ENSMUST00000100164 Rbm42Q91V81 474 aaKnown RBP16.85■□□□□ 0.29
Hoxc4-201ENSMUST00000100164 LlphQ9D945 130 aaKnown RBP16.85■□□□□ 0.29
Hoxc4-201ENSMUST00000100164 Ap3b2Q9JME5 1082 aa16.85■□□□□ 0.29
Hoxc4-201ENSMUST00000100164 NalcnQ8BXR5 1738 aa16.84■□□□□ 0.29
Hoxc4-201ENSMUST00000100164 Fnbp4Q6ZQ03 1031 aa16.84■□□□□ 0.29
Hoxc4-201ENSMUST00000100164 AnlnQ8K298 1121 aaKnown RBP16.84■□□□□ 0.29
Hoxc4-201ENSMUST00000100164 Tpm3P21107 285 aaKnown RBP16.84■□□□□ 0.29
Hoxc4-201ENSMUST00000100164 Nol11Q8BJW5 723 aaKnown RBP16.84■□□□□ 0.29
Hoxc4-201ENSMUST00000100164 DccP70211 1447 aa16.83■□□□□ 0.29
Hoxc4-201ENSMUST00000100164 Klhl34A2AI76 644 aa16.83■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 Nucb2P81117 420 aa16.83■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 Adcy5P84309 1262 aa16.83■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 Fam13aQ8BGI4 693 aa16.82■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 Cypt1Q8CH20 168 aa16.82■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 Sos1Q62245 1319 aa16.82■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 Slit2Q9R1B9 1521 aa16.82■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 Filip1lQ6P6L0 1131 aa16.82■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 Slc12a5Q91V14 1138 aa16.82■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 Gm973E9Q295 1059 aa16.81■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 Trim28Q62318 834 aa16.81■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 CtifQ6PEE2 600 aaKnown RBP16.81■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 Stac3Q8BZ71 360 aa16.81■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 Exosc9Q9JHI7 438 aaKnown RBP16.81■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 Kif20bQ80WE4 1774 aaKnown RBP16.81■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 Anapc15P60007 132 aa16.8■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 Utp14aQ640M1 767 aaKnown RBP16.8■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 C3P01027 1663 aa16.8■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 Smarce1O54941 411 aaKnown RBP16.8■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 Casc1Q6TDU8 730 aa16.8■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 PalmQ9Z0P4 383 aa16.8■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 Rreb1Q3UH06 1700 aaKnown RBP16.8■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 Sass6Q80UK7 654 aa16.79■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 Ric3Q8BPM6 367 aa16.79■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 Cyp46a1Q9WVK8 500 aa16.79■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 Zfp51Q3U4L8 781 aa16.78■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 Ccar2Q8VDP4 922 aaKnown RBP16.78■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 Plekhg1F6S200 1446 aa16.78■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 MccE9PWI3 1003 aa16.78■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 Q3UJC8 639 aa16.78■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 Ddx19aQ61655 478 aaKnown RBP16.78■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 Q9D2X8 372 aa16.78■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 PtprvP70289 1705 aa16.78■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 Nfatc2ipO09130 412 aa16.77■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 Nol8Q3UHX0 1147 aaKnown RBP16.77■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 Mum1Q6DID5 682 aa16.77■□□□□ 0.28
Hoxc4-201ENSMUST00000100164 Zfp142G5E869 1843 aa16.77■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Triml2E9PW10 424 aa16.77■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Gm10563F6WIE4 79 aa16.77■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Ccdc162pQ0VG85 912 aa16.77■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Oxsr1Q6P9R2 527 aa16.77■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Med4Q9CQA5 270 aa16.77■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Ybx3Q9JKB3 361 aaKnown RBP16.77■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Atg4a-psA0A0G2JFS9 396 aa16.76■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Trim30aP15533 496 aa16.76■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Strn4P58404 760 aa16.76■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Atg4aQ8C9S8 396 aa16.76■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Serpina10Q8R121 448 aa16.76■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Ccdc7Q9D541 371 aa16.76■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Spef2Q8C9J3 1734 aa16.76■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Kif24Q6NWW5 1356 aa16.76■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Wnk3Q80XP9 1757 aa16.75■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Cypt2Q6P924 180 aa16.75■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 KinQ8K339 391 aa16.75■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Gtpbp4Q99ME9 634 aaKnown RBP16.75■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Cntnap1O54991 1385 aa16.75■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 D430041D05RikF6ZGR6 1678 aa16.75■□□□□ 0.27
Hoxc4-201ENSMUST00000100164 Wdr93Q402B2 695 aa16.75■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 18.1 ms