RNA–Protein interactions for RNA: ENSMUST00000035340.13

Usp54-202, Transcript of Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Usp54, Length 6,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54-202ENSMUST00000035340 ChgaP26339 463 aaKnown RBP9.1□□□□□ -0.95
Usp54-202ENSMUST00000035340 NapbP28663 298 aa9.1□□□□□ -0.95
Usp54-202ENSMUST00000035340 Dydc2Q9D3X8 139 aa9.1□□□□□ -0.95
Usp54-202ENSMUST00000035340 Bag3Q9JLV1 577 aaKnown RBP9.1□□□□□ -0.95
Usp54-202ENSMUST00000035340 Irgm2A0A140LIF8 407 aa9.09□□□□□ -0.95
Usp54-202ENSMUST00000035340 Dctn1O08788 1281 aa9.09□□□□□ -0.95
Usp54-202ENSMUST00000035340 GpkowQ56A08 488 aa9.09□□□□□ -0.95
Usp54-202ENSMUST00000035340 Abcc1O35379 1528 aa9.09□□□□□ -0.95
Usp54-202ENSMUST00000035340 Pik3c2gO70167 1506 aa9.09□□□□□ -0.95
Usp54-202ENSMUST00000035340 Ddx46Q569Z5 1032 aaKnown RBP9.09□□□□□ -0.95
Usp54-202ENSMUST00000035340 Zc3h12cQ5DTV4 884 aa9.09□□□□□ -0.95
Usp54-202ENSMUST00000035340 Echdc1Q9D9V3 322 aa9.09□□□□□ -0.95
Usp54-202ENSMUST00000035340 Fam13aQ8BGI4 693 aa9.09□□□□□ -0.95
Usp54-202ENSMUST00000035340 Golim4Q8BXA1 655 aa9.09□□□□□ -0.95
Usp54-202ENSMUST00000035340 Nop14Q8R3N1 860 aaKnown RBP9.09□□□□□ -0.95
Usp54-202ENSMUST00000035340 Noc2lQ9WV70 747 aaKnown RBP9.09□□□□□ -0.95
Usp54-202ENSMUST00000035340 NppbP40753 121 aa9.09□□□□□ -0.96
Usp54-202ENSMUST00000035340 Pdcl3Q8BVF2 240 aa9.09□□□□□ -0.96
Usp54-202ENSMUST00000035340 Nat10Q8K224 1024 aaKnown RBP9.09□□□□□ -0.96
Usp54-202ENSMUST00000035340 Pik3r4Q8VD65 1358 aa9.08□□□□□ -0.96
Usp54-202ENSMUST00000035340 Soga3Q6NZL0 945 aa9.08□□□□□ -0.96
Usp54-202ENSMUST00000035340 Disp1Q3TDN0 1521 aa9.08□□□□□ -0.96
Usp54-202ENSMUST00000035340 Nphp3Q7TNH6 1325 aa9.08□□□□□ -0.96
Usp54-202ENSMUST00000035340 Rai14Q9EP71 979 aaKnown RBP9.08□□□□□ -0.96
Usp54-202ENSMUST00000035340 ParvgQ9ERD8 331 aa9.08□□□□□ -0.96
Usp54-202ENSMUST00000035340 PtprgQ05909 1442 aa9.08□□□□□ -0.96
Usp54-202ENSMUST00000035340 Slc26a8Q8R0C3 999 aa9.08□□□□□ -0.96
Usp54-202ENSMUST00000035340 Map3k13Q1HKZ5 959 aa9.08□□□□□ -0.96
Usp54-202ENSMUST00000035340 Jakmip1Q8BVL9 626 aa9.08□□□□□ -0.96
Usp54-202ENSMUST00000035340 Amotl1Q9D4H4 968 aa9.08□□□□□ -0.96
Usp54-202ENSMUST00000035340 Gtf3c5Q8R2T8 520 aa9.08□□□□□ -0.96
Usp54-202ENSMUST00000035340 Cavin1O54724 392 aa9.07□□□□□ -0.96
Usp54-202ENSMUST00000035340 Ift74Q8BKE9 600 aa9.07□□□□□ -0.96
Usp54-202ENSMUST00000035340 Ncbp3Q8BZR9 615 aaKnown RBP9.07□□□□□ -0.96
Usp54-202ENSMUST00000035340 Rprd2Q6NXI6 1469 aaKnown RBP9.07□□□□□ -0.96
Usp54-202ENSMUST00000035340 Hook3Q8BUK6 718 aa9.07□□□□□ -0.96
Usp54-202ENSMUST00000035340 Slc14a2Q8R4T9 930 aa9.07□□□□□ -0.96
Usp54-202ENSMUST00000035340 Smtnl1Q99LM3 459 aa9.07□□□□□ -0.96
Usp54-202ENSMUST00000035340 Jdp2P97875 163 aa9.07□□□□□ -0.96
Usp54-202ENSMUST00000035340 Cep55Q8BT07 462 aa9.07□□□□□ -0.96
Usp54-202ENSMUST00000035340 Bag4Q8CI61 457 aa9.07□□□□□ -0.96
Usp54-202ENSMUST00000035340 Nup133Q8R0G9 1155 aa9.07□□□□□ -0.96
Usp54-202ENSMUST00000035340 Kif18aQ91WD7 886 aa9.07□□□□□ -0.96
Usp54-202ENSMUST00000035340 Cetn2Q9R1K9 172 aa9.07□□□□□ -0.96
Usp54-202ENSMUST00000035340 Cfap58B2RW38 873 aa9.07□□□□□ -0.96
Usp54-202ENSMUST00000035340 Slc4a2P13808 1237 aaKnown RBP9.07□□□□□ -0.96
Usp54-202ENSMUST00000035340 Rad23bP54728 416 aa9.07□□□□□ -0.96
Usp54-202ENSMUST00000035340 SfswapQ3USH5 945 aaKnown RBP9.07□□□□□ -0.96
Usp54-202ENSMUST00000035340 Tmem266Q8BZB3 538 aa9.07□□□□□ -0.96
Usp54-202ENSMUST00000035340 Fez1Q8K0X8 392 aa9.07□□□□□ -0.96
Usp54-202ENSMUST00000035340 Lrrfip2Q91WK0 415 aa9.07□□□□□ -0.96
Usp54-202ENSMUST00000035340 NpatQ8BMA5 1420 aa9.06□□□□□ -0.96
Usp54-202ENSMUST00000035340 Med4Q9CQA5 270 aa9.06□□□□□ -0.96
Usp54-202ENSMUST00000035340 Ppp1r21Q3TDD9 780 aa9.06□□□□□ -0.96
Usp54-202ENSMUST00000035340 Ddb1Q3U1J4 1140 aaKnown RBP9.06□□□□□ -0.96
Usp54-202ENSMUST00000035340 Igf2bp2Q5SF07 592 aaKnown RBP9.06□□□□□ -0.96
Usp54-202ENSMUST00000035340 Tsg101Q61187 391 aa9.06□□□□□ -0.96
Usp54-202ENSMUST00000035340 Trim11Q99PQ2 467 aa9.06□□□□□ -0.96
Usp54-202ENSMUST00000035340 Taf7Q9R1C0 341 aa9.06□□□□□ -0.96
Usp54-202ENSMUST00000035340 Brf1Q8CFK2 676 aa9.06□□□□□ -0.96
Usp54-202ENSMUST00000035340 Cep112Q5PR68 954 aa9.06□□□□□ -0.96
Usp54-202ENSMUST00000035340 Eif5P59325 429 aaKnown RBP9.06□□□□□ -0.96
Usp54-202ENSMUST00000035340 Dusp9Q7TNL7 452 aa9.06□□□□□ -0.96
Usp54-202ENSMUST00000035340 Gm7347D3YYI9 267 aa9.05□□□□□ -0.96
Usp54-202ENSMUST00000035340 Speer4aF8VPX6 267 aa9.05□□□□□ -0.96
Usp54-202ENSMUST00000035340 Hook2Q7TMK6 716 aa9.05□□□□□ -0.96
Usp54-202ENSMUST00000035340 Nol7Q9D7Z3 254 aaKnown RBP9.05□□□□□ -0.96
Usp54-202ENSMUST00000035340 Mrpl12Q9DB15 201 aaKnown RBP9.05□□□□□ -0.96
Usp54-202ENSMUST00000035340 Shroom2A2ALU4 1481 aa9.05□□□□□ -0.96
Usp54-202ENSMUST00000035340 Tmc1Q8R4P5 757 aa9.05□□□□□ -0.96
Usp54-202ENSMUST00000035340 CenpqQ9CPQ5 267 aa9.05□□□□□ -0.96
Usp54-202ENSMUST00000035340 TnmdQ9EP64 317 aa9.05□□□□□ -0.96
Usp54-202ENSMUST00000035340 Atp7aQ64430 1491 aa9.05□□□□□ -0.96
Usp54-202ENSMUST00000035340 Ttll13A4Q9F6 804 aa9.05□□□□□ -0.96
Usp54-202ENSMUST00000035340 Cyp7a1Q64505 503 aa9.05□□□□□ -0.96
Usp54-202ENSMUST00000035340 Iqca1Q9CUL5 857 aa9.05□□□□□ -0.96
Usp54-202ENSMUST00000035340 Ncoa3O09000 1398 aa9.05□□□□□ -0.96
Usp54-202ENSMUST00000035340 Ppp4r3aQ6P2K6 820 aa9.05□□□□□ -0.96
Usp54-202ENSMUST00000035340 Fam160b2Q80YR2 744 aa9.05□□□□□ -0.96
Usp54-202ENSMUST00000035340 Fam193aQ8CGI1 1231 aaKnown RBP9.05□□□□□ -0.96
Usp54-202ENSMUST00000035340 Hs2st1Q8R3H7 356 aa9.05□□□□□ -0.96
Usp54-202ENSMUST00000035340 Ttc14Q9CSP9 761 aa9.05□□□□□ -0.96
Usp54-202ENSMUST00000035340 Naip5Q9R016 1403 aa9.05□□□□□ -0.96
Usp54-202ENSMUST00000035340 Sall3Q62255 1320 aa9.05□□□□□ -0.96
Usp54-202ENSMUST00000035340 Slc12a5Q91V14 1138 aa9.04□□□□□ -0.96
Usp54-202ENSMUST00000035340 Ddx19aQ61655 478 aaKnown RBP9.04□□□□□ -0.96
Usp54-202ENSMUST00000035340 Kiaa1524Q8BWY9 907 aa9.04□□□□□ -0.96
Usp54-202ENSMUST00000035340 Hmg20bQ9Z104 317 aa9.04□□□□□ -0.96
Usp54-202ENSMUST00000035340 Tnni2P13412 182 aa9.04□□□□□ -0.96
Usp54-202ENSMUST00000035340 Cdkn1cP49919 348 aa9.04□□□□□ -0.96
Usp54-202ENSMUST00000035340 Nip7Q9CXK8 180 aaKnown RBP9.04□□□□□ -0.96
Usp54-202ENSMUST00000035340 Ampd3O08739 766 aa9.04□□□□□ -0.96
Usp54-202ENSMUST00000035340 PzpQ61838 1495 aa9.04□□□□□ -0.96
Usp54-202ENSMUST00000035340 Prm3Q62100 101 aa9.04□□□□□ -0.96
Usp54-202ENSMUST00000035340 Maco1Q7TQE6 664 aaKnown RBP9.04□□□□□ -0.96
Usp54-202ENSMUST00000035340 Samm50Q8BGH2 469 aa9.04□□□□□ -0.96
Usp54-202ENSMUST00000035340 Pbrm1Q8BSQ9 1634 aaKnown RBP9.04□□□□□ -0.96
Usp54-202ENSMUST00000035340 Ppp1r42Q8R1Z4 357 aa9.04□□□□□ -0.96
Usp54-202ENSMUST00000035340 Dnajc2P54103 621 aaKnown RBP9.04□□□□□ -0.96
Usp54-202ENSMUST00000035340 Api5O35841 504 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 22,080 RNA–protein pairs in 22.7 ms