RNA–Protein interactions for RNA: ENSMUST00000035237.11

Usp4-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp4, Length 3,662 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-201ENSMUST00000035237 Igf1rQ60751 1373 aa18.08■□□□□ 0.48
Usp4-201ENSMUST00000035237 Kif24Q6NWW5 1356 aa18.08■□□□□ 0.48
Usp4-201ENSMUST00000035237 Cdkn1cP49919 348 aa18.08■□□□□ 0.48
Usp4-201ENSMUST00000035237 Vgll3P85442 326 aa18.08■□□□□ 0.48
Usp4-201ENSMUST00000035237 PdcQ9QW08 244 aa18.08■□□□□ 0.48
Usp4-201ENSMUST00000035237 Sh3bp5Q9Z131 463 aa18.08■□□□□ 0.48
Usp4-201ENSMUST00000035237 Strn4P58404 760 aa18.07■□□□□ 0.48
Usp4-201ENSMUST00000035237 Ube2hP62257 183 aa18.07■□□□□ 0.48
Usp4-201ENSMUST00000035237 Mum1Q6DID5 682 aa18.07■□□□□ 0.48
Usp4-201ENSMUST00000035237 Ccdc66Q6NS45 935 aa18.07■□□□□ 0.48
Usp4-201ENSMUST00000035237 Rps6ka5Q8C050 863 aa18.07■□□□□ 0.48
Usp4-201ENSMUST00000035237 Efcab6Q6P1E8 1516 aa18.07■□□□□ 0.48
Usp4-201ENSMUST00000035237 Rims1Q99NE5 1463 aa18.07■□□□□ 0.48
Usp4-201ENSMUST00000035237 Snap23O09044 210 aa18.07■□□□□ 0.48
Usp4-201ENSMUST00000035237 Map3k13Q1HKZ5 959 aa18.07■□□□□ 0.48
Usp4-201ENSMUST00000035237 Ddx19aQ61655 478 aaKnown RBP18.07■□□□□ 0.48
Usp4-201ENSMUST00000035237 Trim28Q62318 834 aa18.07■□□□□ 0.48
Usp4-201ENSMUST00000035237 Rbm42Q91V81 474 aaKnown RBP18.07■□□□□ 0.48
Usp4-201ENSMUST00000035237 Abcc3B2RX12 1523 aa18.06■□□□□ 0.48
Usp4-201ENSMUST00000035237 Zfp251Q6PCX8 632 aa18.06■□□□□ 0.48
Usp4-201ENSMUST00000035237 Mctp1E9PV86 951 aa18.06■□□□□ 0.48
Usp4-201ENSMUST00000035237 Pes1Q9EQ61 584 aaKnown RBP18.05■□□□□ 0.48
Usp4-201ENSMUST00000035237 MarsQ68FL6 902 aaKnown RBP18.05■□□□□ 0.48
Usp4-201ENSMUST00000035237 TnmdQ9EP64 317 aa18.05■□□□□ 0.48
Usp4-201ENSMUST00000035237 Mlh1Q9JK91 760 aa18.05■□□□□ 0.48
Usp4-201ENSMUST00000035237 U2af2P26369 475 aaKnown RBP18.05■□□□□ 0.48
Usp4-201ENSMUST00000035237 Bcl2l13P59017 434 aa18.05■□□□□ 0.48
Usp4-201ENSMUST00000035237 Tceanc2Q8R2M0 207 aa18.05■□□□□ 0.48
Usp4-201ENSMUST00000035237 Nop14Q8R3N1 860 aaKnown RBP18.05■□□□□ 0.48
Usp4-201ENSMUST00000035237 Top1mtQ8R4U6 593 aa18.05■□□□□ 0.48
Usp4-201ENSMUST00000035237 Eif4a2P10630 407 aa18.04■□□□□ 0.48
Usp4-201ENSMUST00000035237 Brf1Q8CFK2 676 aa18.04■□□□□ 0.48
Usp4-201ENSMUST00000035237 Ythdc2B2RR83 1445 aaKnown RBP18.04■□□□□ 0.48
Usp4-201ENSMUST00000035237 Tpx2A2APB8 745 aaKnown RBP18.04■□□□□ 0.48
Usp4-201ENSMUST00000035237 Zkscan7E9PVW1 718 aa18.04■□□□□ 0.48
Usp4-201ENSMUST00000035237 Cers3Q1A3B0 383 aa18.04■□□□□ 0.48
Usp4-201ENSMUST00000035237 Kiaa0753Q6A000 959 aa18.04■□□□□ 0.48
Usp4-201ENSMUST00000035237 Uggt1Q6P5E4 1551 aa18.04■□□□□ 0.48
Usp4-201ENSMUST00000035237 Gm21190A0A0G2JGJ6 266 aa18.04■□□□□ 0.48
Usp4-201ENSMUST00000035237 Usp25P57080 1055 aa18.03■□□□□ 0.48
Usp4-201ENSMUST00000035237 Ccar2Q8VDP4 922 aaKnown RBP18.03■□□□□ 0.48
Usp4-201ENSMUST00000035237 Uhrf1bp1lA2RSJ4 1457 aa18.03■□□□□ 0.48
Usp4-201ENSMUST00000035237 NaspQ99MD9 773 aaKnown RBP18.03■□□□□ 0.48
Usp4-201ENSMUST00000035237 Pmfbp1Q9WVQ0 1022 aa18.03■□□□□ 0.48
Usp4-201ENSMUST00000035237 Med14A2ABV5 1459 aaKnown RBP18.03■□□□□ 0.48
Usp4-201ENSMUST00000035237 Asxl2Q8BZ32 1370 aa18.03■□□□□ 0.48
Usp4-201ENSMUST00000035237 Map3k19E9Q3S4 1311 aa18.03■□□□□ 0.48
Usp4-201ENSMUST00000035237 Anapc15P60007 132 aa18.03■□□□□ 0.48
Usp4-201ENSMUST00000035237 Afap1Q80YS6 731 aa18.03■□□□□ 0.48
Usp4-201ENSMUST00000035237 Nucb2P81117 420 aa18.02■□□□□ 0.48
Usp4-201ENSMUST00000035237 Zcchc11B2RX14 1644 aaKnown RBP18.02■□□□□ 0.48
Usp4-201ENSMUST00000035237 Zfp51Q3U4L8 781 aa18.02■□□□□ 0.48
Usp4-201ENSMUST00000035237 Zpr1Q62384 459 aa18.02■□□□□ 0.48
Usp4-201ENSMUST00000035237 Plxnc1Q9QZC2 1574 aa18.02■□□□□ 0.48
Usp4-201ENSMUST00000035237 Znf518aB2RRF6 1478 aaKnown RBP18.01■□□□□ 0.47
Usp4-201ENSMUST00000035237 Neurl4Q5NCX5 1563 aa18.01■□□□□ 0.47
Usp4-201ENSMUST00000035237 Exoc6bA6H5Z3 810 aa18.01■□□□□ 0.47
Usp4-201ENSMUST00000035237 R3hcc1Q8BSI6 488 aa18.01■□□□□ 0.47
Usp4-201ENSMUST00000035237 OvosQ3UU35 1456 aa18.01■□□□□ 0.47
Usp4-201ENSMUST00000035237 Tpm3P21107 285 aaKnown RBP18.01■□□□□ 0.47
Usp4-201ENSMUST00000035237 Utp18Q5SSI6 552 aaKnown RBP18.01■□□□□ 0.47
Usp4-201ENSMUST00000035237 Hmgn5Q9JL35 406 aa18.01■□□□□ 0.47
Usp4-201ENSMUST00000035237 Ncbp1Q3UYV9 790 aaKnown RBP18.01■□□□□ 0.47
Usp4-201ENSMUST00000035237 Mphosph10Q810V0 681 aaKnown RBP18■□□□□ 0.47
Usp4-201ENSMUST00000035237 Tbc1d8Q9Z1A9 1134 aa18■□□□□ 0.47
Usp4-201ENSMUST00000035237 Lrriq1Q0P5X1 1673 aa18■□□□□ 0.47
Usp4-201ENSMUST00000035237 Ddx11Q6AXC6 880 aa18■□□□□ 0.47
Usp4-201ENSMUST00000035237 Chl1P70232 1209 aa17.99■□□□□ 0.47
Usp4-201ENSMUST00000035237 SrrtQ99MR6 875 aaKnown RBP17.99■□□□□ 0.47
Usp4-201ENSMUST00000035237 Abca6Q8K441 1624 aa17.99■□□□□ 0.47
Usp4-201ENSMUST00000035237 Prrc2bQ7TPM1 1486 aaKnown RBP17.99■□□□□ 0.47
Usp4-201ENSMUST00000035237 Mmp8O70138 465 aa17.99■□□□□ 0.47
Usp4-201ENSMUST00000035237 Uhrf1bp1B2KF50 1429 aa17.98■□□□□ 0.47
Usp4-201ENSMUST00000035237 Atp8b2P98199 1209 aa17.98■□□□□ 0.47
Usp4-201ENSMUST00000035237 Nxf2Q4ZGD8 691 aa17.98■□□□□ 0.47
Usp4-201ENSMUST00000035237 Myom1Q62234 1667 aaKnown RBP17.98■□□□□ 0.47
Usp4-201ENSMUST00000035237 Ano6Q6P9J9 911 aa17.98■□□□□ 0.47
Usp4-201ENSMUST00000035237 Hnrnpul1Q8VDM6 859 aaKnown RBP17.98■□□□□ 0.47
Usp4-201ENSMUST00000035237 Fkbp4P30416 458 aa17.97■□□□□ 0.47
Usp4-201ENSMUST00000035237 Syt1P46096 421 aa17.97■□□□□ 0.47
Usp4-201ENSMUST00000035237 Zbtb45Q52KG4 520 aa17.97■□□□□ 0.47
Usp4-201ENSMUST00000035237 Mx2Q9WVP9 655 aa17.97■□□□□ 0.47
Usp4-201ENSMUST00000035237 Hecw1Q8K4P8 1604 aa17.97■□□□□ 0.47
Usp4-201ENSMUST00000035237 Wdr93Q402B2 695 aa17.97■□□□□ 0.47
Usp4-201ENSMUST00000035237 Pde3bQ61409 1100 aa17.97■□□□□ 0.47
Usp4-201ENSMUST00000035237 Ccer1Q9CQL2 403 aa17.97■□□□□ 0.47
Usp4-201ENSMUST00000035237 Irx4Q9QY61 515 aa17.97■□□□□ 0.47
Usp4-201ENSMUST00000035237 Zscan22Q8BGS5 496 aa17.97■□□□□ 0.47
Usp4-201ENSMUST00000035237 Tsr2Q8C8T8 191 aa17.97■□□□□ 0.47
Usp4-201ENSMUST00000035237 Ndufa8Q9DCJ5 172 aa17.97■□□□□ 0.47
Usp4-201ENSMUST00000035237 Chpf2Q3UU43 768 aa17.96■□□□□ 0.47
Usp4-201ENSMUST00000035237 Mcmdc2E9Q956 681 aa17.96■□□□□ 0.47
Usp4-201ENSMUST00000035237 Ppfia3P60469 1194 aa17.96■□□□□ 0.47
Usp4-201ENSMUST00000035237 Wdr33Q8K4P0 1330 aaKnown RBP17.96■□□□□ 0.47
Usp4-201ENSMUST00000035237 Nos1Q9Z0J4 1429 aa17.96■□□□□ 0.47
Usp4-201ENSMUST00000035237 Eif2ak4Q9QZ05 1648 aa17.96■□□□□ 0.47
Usp4-201ENSMUST00000035237 Hook1Q8BIL5 728 aa17.96■□□□□ 0.47
Usp4-201ENSMUST00000035237 Gli2Q0VGT2 1544 aa17.95■□□□□ 0.46
Usp4-201ENSMUST00000035237 Atp2b3Q0VF55 1220 aa17.95■□□□□ 0.46
Usp4-201ENSMUST00000035237 Ptch1Q61115 1434 aa17.95■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 99.5 ms