RNA–Protein interactions for RNA: ENSMUST00000035237.11

Usp4-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp4, Length 3,662 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4-201ENSMUST00000035237 Igf1rQ60751 1373 aa18.08■□□□□ 0.48
Usp4-201ENSMUST00000035237 Kif24Q6NWW5 1356 aa18.08■□□□□ 0.48
Usp4-201ENSMUST00000035237 Cdkn1cP49919 348 aa18.08■□□□□ 0.48
Usp4-201ENSMUST00000035237 Vgll3P85442 326 aa18.08■□□□□ 0.48
Usp4-201ENSMUST00000035237 PdcQ9QW08 244 aa18.08■□□□□ 0.48
Usp4-201ENSMUST00000035237 Sh3bp5Q9Z131 463 aa18.08■□□□□ 0.48
Usp4-201ENSMUST00000035237 Strn4P58404 760 aa18.07■□□□□ 0.48
Usp4-201ENSMUST00000035237 Ube2hP62257 183 aa18.07■□□□□ 0.48
Usp4-201ENSMUST00000035237 Mum1Q6DID5 682 aa18.07■□□□□ 0.48
Usp4-201ENSMUST00000035237 Ccdc66Q6NS45 935 aa18.07■□□□□ 0.48
Usp4-201ENSMUST00000035237 Rps6ka5Q8C050 863 aa18.07■□□□□ 0.48
Usp4-201ENSMUST00000035237 Efcab6Q6P1E8 1516 aa18.07■□□□□ 0.48
Usp4-201ENSMUST00000035237 Rims1Q99NE5 1463 aa18.07■□□□□ 0.48
Usp4-201ENSMUST00000035237 Snap23O09044 210 aa18.07■□□□□ 0.48
Usp4-201ENSMUST00000035237 Map3k13Q1HKZ5 959 aa18.07■□□□□ 0.48
Usp4-201ENSMUST00000035237 Ddx19aQ61655 478 aaKnown RBP18.07■□□□□ 0.48
Usp4-201ENSMUST00000035237 Trim28Q62318 834 aa18.07■□□□□ 0.48
Usp4-201ENSMUST00000035237 Rbm42Q91V81 474 aaKnown RBP18.07■□□□□ 0.48
Usp4-201ENSMUST00000035237 Abcc3B2RX12 1523 aa18.06■□□□□ 0.48
Usp4-201ENSMUST00000035237 Zfp251Q6PCX8 632 aa18.06■□□□□ 0.48
Usp4-201ENSMUST00000035237 Mctp1E9PV86 951 aa18.06■□□□□ 0.48
Usp4-201ENSMUST00000035237 Pes1Q9EQ61 584 aaKnown RBP18.05■□□□□ 0.48
Usp4-201ENSMUST00000035237 MarsQ68FL6 902 aaKnown RBP18.05■□□□□ 0.48
Usp4-201ENSMUST00000035237 TnmdQ9EP64 317 aa18.05■□□□□ 0.48
Usp4-201ENSMUST00000035237 Mlh1Q9JK91 760 aa18.05■□□□□ 0.48
Usp4-201ENSMUST00000035237 U2af2P26369 475 aaKnown RBP18.05■□□□□ 0.48
Usp4-201ENSMUST00000035237 Bcl2l13P59017 434 aa18.05■□□□□ 0.48
Usp4-201ENSMUST00000035237 Tceanc2Q8R2M0 207 aa18.05■□□□□ 0.48
Usp4-201ENSMUST00000035237 Nop14Q8R3N1 860 aaKnown RBP18.05■□□□□ 0.48
Usp4-201ENSMUST00000035237 Top1mtQ8R4U6 593 aa18.05■□□□□ 0.48
Usp4-201ENSMUST00000035237 Eif4a2P10630 407 aa18.04■□□□□ 0.48
Usp4-201ENSMUST00000035237 Brf1Q8CFK2 676 aa18.04■□□□□ 0.48
Usp4-201ENSMUST00000035237 Ythdc2B2RR83 1445 aaKnown RBP18.04■□□□□ 0.48
Usp4-201ENSMUST00000035237 Tpx2A2APB8 745 aaKnown RBP18.04■□□□□ 0.48
Usp4-201ENSMUST00000035237 Zkscan7E9PVW1 718 aa18.04■□□□□ 0.48
Usp4-201ENSMUST00000035237 Cers3Q1A3B0 383 aa18.04■□□□□ 0.48
Usp4-201ENSMUST00000035237 Kiaa0753Q6A000 959 aa18.04■□□□□ 0.48
Usp4-201ENSMUST00000035237 Uggt1Q6P5E4 1551 aa18.04■□□□□ 0.48
Usp4-201ENSMUST00000035237 Gm21190A0A0G2JGJ6 266 aa18.04■□□□□ 0.48
Usp4-201ENSMUST00000035237 Usp25P57080 1055 aa18.03■□□□□ 0.48
Usp4-201ENSMUST00000035237 Ccar2Q8VDP4 922 aaKnown RBP18.03■□□□□ 0.48
Usp4-201ENSMUST00000035237 Uhrf1bp1lA2RSJ4 1457 aa18.03■□□□□ 0.48
Usp4-201ENSMUST00000035237 NaspQ99MD9 773 aaKnown RBP18.03■□□□□ 0.48
Usp4-201ENSMUST00000035237 Pmfbp1Q9WVQ0 1022 aa18.03■□□□□ 0.48
Usp4-201ENSMUST00000035237 Med14A2ABV5 1459 aaKnown RBP18.03■□□□□ 0.48
Usp4-201ENSMUST00000035237 Asxl2Q8BZ32 1370 aa18.03■□□□□ 0.48
Usp4-201ENSMUST00000035237 Map3k19E9Q3S4 1311 aa18.03■□□□□ 0.48
Usp4-201ENSMUST00000035237 Anapc15P60007 132 aa18.03■□□□□ 0.48
Usp4-201ENSMUST00000035237 Afap1Q80YS6 731 aa18.03■□□□□ 0.48
Usp4-201ENSMUST00000035237 Nucb2P81117 420 aa18.02■□□□□ 0.48
Usp4-201ENSMUST00000035237 Zcchc11B2RX14 1644 aaKnown RBP18.02■□□□□ 0.48
Usp4-201ENSMUST00000035237 Zfp51Q3U4L8 781 aa18.02■□□□□ 0.48
Usp4-201ENSMUST00000035237 Zpr1Q62384 459 aa18.02■□□□□ 0.48
Usp4-201ENSMUST00000035237 Plxnc1Q9QZC2 1574 aa18.02■□□□□ 0.48
Usp4-201ENSMUST00000035237 Znf518aB2RRF6 1478 aaKnown RBP18.01■□□□□ 0.47
Usp4-201ENSMUST00000035237 Neurl4Q5NCX5 1563 aa18.01■□□□□ 0.47
Usp4-201ENSMUST00000035237 Exoc6bA6H5Z3 810 aa18.01■□□□□ 0.47
Usp4-201ENSMUST00000035237 R3hcc1Q8BSI6 488 aa18.01■□□□□ 0.47
Usp4-201ENSMUST00000035237 OvosQ3UU35 1456 aa18.01■□□□□ 0.47
Usp4-201ENSMUST00000035237 Tpm3P21107 285 aaKnown RBP18.01■□□□□ 0.47
Usp4-201ENSMUST00000035237 Utp18Q5SSI6 552 aaKnown RBP18.01■□□□□ 0.47
Usp4-201ENSMUST00000035237 Hmgn5Q9JL35 406 aa18.01■□□□□ 0.47
Usp4-201ENSMUST00000035237 Ncbp1Q3UYV9 790 aaKnown RBP18.01■□□□□ 0.47
Usp4-201ENSMUST00000035237 Mphosph10Q810V0 681 aaKnown RBP18■□□□□ 0.47
Usp4-201ENSMUST00000035237 Tbc1d8Q9Z1A9 1134 aa18■□□□□ 0.47
Usp4-201ENSMUST00000035237 Lrriq1Q0P5X1 1673 aa18■□□□□ 0.47
Usp4-201ENSMUST00000035237 Ddx11Q6AXC6 880 aa18■□□□□ 0.47
Usp4-201ENSMUST00000035237 Chl1P70232 1209 aa17.99■□□□□ 0.47
Usp4-201ENSMUST00000035237 SrrtQ99MR6 875 aaKnown RBP17.99■□□□□ 0.47
Usp4-201ENSMUST00000035237 Abca6Q8K441 1624 aa17.99■□□□□ 0.47
Usp4-201ENSMUST00000035237 Prrc2bQ7TPM1 1486 aaKnown RBP17.99■□□□□ 0.47
Usp4-201ENSMUST00000035237 Mmp8O70138 465 aa17.99■□□□□ 0.47
Usp4-201ENSMUST00000035237 Uhrf1bp1B2KF50 1429 aa17.98■□□□□ 0.47
Usp4-201ENSMUST00000035237 Atp8b2P98199 1209 aa17.98■□□□□ 0.47
Usp4-201ENSMUST00000035237 Nxf2Q4ZGD8 691 aa17.98■□□□□ 0.47
Usp4-201ENSMUST00000035237 Myom1Q62234 1667 aaKnown RBP17.98■□□□□ 0.47
Usp4-201ENSMUST00000035237 Ano6Q6P9J9 911 aa17.98■□□□□ 0.47
Usp4-201ENSMUST00000035237 Hnrnpul1Q8VDM6 859 aaKnown RBP17.98■□□□□ 0.47
Usp4-201ENSMUST00000035237 Fkbp4P30416 458 aa17.97■□□□□ 0.47
Usp4-201ENSMUST00000035237 Syt1P46096 421 aa17.97■□□□□ 0.47
Usp4-201ENSMUST00000035237 Zbtb45Q52KG4 520 aa17.97■□□□□ 0.47
Usp4-201ENSMUST00000035237 Mx2Q9WVP9 655 aa17.97■□□□□ 0.47
Usp4-201ENSMUST00000035237 Hecw1Q8K4P8 1604 aa17.97■□□□□ 0.47
Usp4-201ENSMUST00000035237 Wdr93Q402B2 695 aa17.97■□□□□ 0.47
Usp4-201ENSMUST00000035237 Pde3bQ61409 1100 aa17.97■□□□□ 0.47
Usp4-201ENSMUST00000035237 Ccer1Q9CQL2 403 aa17.97■□□□□ 0.47
Usp4-201ENSMUST00000035237 Irx4Q9QY61 515 aa17.97■□□□□ 0.47
Usp4-201ENSMUST00000035237 Zscan22Q8BGS5 496 aa17.97■□□□□ 0.47
Usp4-201ENSMUST00000035237 Tsr2Q8C8T8 191 aa17.97■□□□□ 0.47
Usp4-201ENSMUST00000035237 Ndufa8Q9DCJ5 172 aa17.97■□□□□ 0.47
Usp4-201ENSMUST00000035237 Chpf2Q3UU43 768 aa17.96■□□□□ 0.47
Usp4-201ENSMUST00000035237 Mcmdc2E9Q956 681 aa17.96■□□□□ 0.47
Usp4-201ENSMUST00000035237 Ppfia3P60469 1194 aa17.96■□□□□ 0.47
Usp4-201ENSMUST00000035237 Wdr33Q8K4P0 1330 aaKnown RBP17.96■□□□□ 0.47
Usp4-201ENSMUST00000035237 Nos1Q9Z0J4 1429 aa17.96■□□□□ 0.47
Usp4-201ENSMUST00000035237 Eif2ak4Q9QZ05 1648 aa17.96■□□□□ 0.47
Usp4-201ENSMUST00000035237 Hook1Q8BIL5 728 aa17.96■□□□□ 0.47
Usp4-201ENSMUST00000035237 Gli2Q0VGT2 1544 aa17.95■□□□□ 0.46
Usp4-201ENSMUST00000035237 Atp2b3Q0VF55 1220 aa17.95■□□□□ 0.46
Usp4-201ENSMUST00000035237 Ptch1Q61115 1434 aa17.95■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms