RNA–Protein interactions for RNA: ENSMUST00000029139.8

Trim55-201, Transcript of MCG19772, mousemouse

APPRIS P1 TSL 2 BASIC

Gene Trim55, Length 2,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55-201ENSMUST00000029139 Fam43bA2AM80 330 aa13.69□□□□□ -0.22
Trim55-201ENSMUST00000029139 Vil1Q62468 827 aa13.69□□□□□ -0.22
Trim55-201ENSMUST00000029139 Nlrp3Q8R4B8 1033 aa13.69□□□□□ -0.22
Trim55-201ENSMUST00000029139 Ankrd49Q8VE42 238 aa13.69□□□□□ -0.22
Trim55-201ENSMUST00000029139 Rmi1Q9D4G9 616 aa13.69□□□□□ -0.22
Trim55-201ENSMUST00000029139 Ccdc83Q9D4V3 305 aa13.69□□□□□ -0.22
Trim55-201ENSMUST00000029139 Atp2b2Q9R0K7 1198 aa13.69□□□□□ -0.22
Trim55-201ENSMUST00000029139 MafgO54790 162 aa13.68□□□□□ -0.22
Trim55-201ENSMUST00000029139 CebpzP53569 1052 aaKnown RBP13.68□□□□□ -0.22
Trim55-201ENSMUST00000029139 Cep131Q62036 1060 aa13.68□□□□□ -0.22
Trim55-201ENSMUST00000029139 1700010I14RikQ7TPG0 532 aa13.68□□□□□ -0.22
Trim55-201ENSMUST00000029139 Calcoco2A2A6M5 331 aa13.68□□□□□ -0.22
Trim55-201ENSMUST00000029139 1700122O11RikJ3QPW6 241 aa13.68□□□□□ -0.22
Trim55-201ENSMUST00000029139 Mcm6P97311 821 aa13.68□□□□□ -0.22
Trim55-201ENSMUST00000029139 Gucy2cQ3UWA6 1072 aa13.68□□□□□ -0.22
Trim55-201ENSMUST00000029139 IqcgQ80W32 419 aa13.68□□□□□ -0.22
Trim55-201ENSMUST00000029139 Frmd3Q8BHD4 595 aa13.68□□□□□ -0.22
Trim55-201ENSMUST00000029139 Mmel1Q9JLI3 765 aa13.68□□□□□ -0.22
Trim55-201ENSMUST00000029139 Fam107bQ3TGF2 131 aa13.67□□□□□ -0.22
Trim55-201ENSMUST00000029139 Fam71bQ5STT6 665 aa13.67□□□□□ -0.22
Trim55-201ENSMUST00000029139 Arid3aQ62431 601 aa13.67□□□□□ -0.22
Trim55-201ENSMUST00000029139 Zeb2Q9R0G7 1215 aa13.67□□□□□ -0.22
Trim55-201ENSMUST00000029139 Cnga1P29974 684 aa13.67□□□□□ -0.22
Trim55-201ENSMUST00000029139 Cdk4P30285 303 aa13.67□□□□□ -0.22
Trim55-201ENSMUST00000029139 Paip2Q9D6V8 124 aa13.67□□□□□ -0.22
Trim55-201ENSMUST00000029139 Ccdc112A0AUP1 442 aa13.66□□□□□ -0.22
Trim55-201ENSMUST00000029139 Atp11aP98197 1187 aa13.66□□□□□ -0.22
Trim55-201ENSMUST00000029139 4930519G04RikQ9CPT7 205 aa13.66□□□□□ -0.22
Trim55-201ENSMUST00000029139 KnstrnQ9D9Z1 312 aaKnown RBP13.66□□□□□ -0.22
Trim55-201ENSMUST00000029139 Stk11Q9WTK7 436 aa13.66□□□□□ -0.22
Trim55-201ENSMUST00000029139 H2afxP27661 143 aaKnown RBP13.66□□□□□ -0.22
Trim55-201ENSMUST00000029139 Scp2P32020 547 aaKnown RBP13.66□□□□□ -0.22
Trim55-201ENSMUST00000029139 Brsk2Q69Z98 735 aa13.66□□□□□ -0.22
Trim55-201ENSMUST00000029139 Cep135Q6P5D4 1140 aa13.66□□□□□ -0.22
Trim55-201ENSMUST00000029139 Rab3gap1Q80UJ7 981 aa13.66□□□□□ -0.22
Trim55-201ENSMUST00000029139 Fam163bQ8BUM6 167 aa13.66□□□□□ -0.22
Trim55-201ENSMUST00000029139 Nop14Q8R3N1 860 aaKnown RBP13.66□□□□□ -0.22
Trim55-201ENSMUST00000029139 Ppp2r3dQ9Z176 491 aa13.66□□□□□ -0.22
Trim55-201ENSMUST00000029139 Ccdc73Q8CDM4 1066 aa13.65□□□□□ -0.22
Trim55-201ENSMUST00000029139 Mageb16Q9CWV4 363 aa13.65□□□□□ -0.22
Trim55-201ENSMUST00000029139 Pcf11G3X9Z4 1553 aa13.65□□□□□ -0.22
Trim55-201ENSMUST00000029139 Q32P12 615 aa13.65□□□□□ -0.22
Trim55-201ENSMUST00000029139 Casc1Q6TDU8 730 aa13.65□□□□□ -0.22
Trim55-201ENSMUST00000029139 Q9D1Z2 194 aa13.65□□□□□ -0.22
Trim55-201ENSMUST00000029139 Ccdc97Q9DBT3 340 aa13.65□□□□□ -0.22
Trim55-201ENSMUST00000029139 DonsonQ9QXP4 560 aa13.65□□□□□ -0.22
Trim55-201ENSMUST00000029139 Yeats2Q3TUF7 1407 aa13.65□□□□□ -0.23
Trim55-201ENSMUST00000029139 Mbd5B1AYB6 1498 aa13.64□□□□□ -0.23
Trim55-201ENSMUST00000029139 Tex14Q7M6U3 1450 aa13.64□□□□□ -0.23
Trim55-201ENSMUST00000029139 AlkP97793 1621 aa13.64□□□□□ -0.23
Trim55-201ENSMUST00000029139 Knl1Q66JQ7 1612 aa13.64□□□□□ -0.23
Trim55-201ENSMUST00000029139 Dixdc1Q80Y83 711 aa13.64□□□□□ -0.23
Trim55-201ENSMUST00000029139 Ccdc30Q8BVF4 654 aa13.64□□□□□ -0.23
Trim55-201ENSMUST00000029139 CrebrfQ8CDG5 640 aaKnown RBP13.64□□□□□ -0.23
Trim55-201ENSMUST00000029139 Tomm22Q9CPQ3 142 aa13.64□□□□□ -0.23
Trim55-201ENSMUST00000029139 Plch2A2AP18 1501 aa13.64□□□□□ -0.23
Trim55-201ENSMUST00000029139 Gadd45bP22339 160 aa13.64□□□□□ -0.23
Trim55-201ENSMUST00000029139 Rundc1Q0VDN7 615 aa13.64□□□□□ -0.23
Trim55-201ENSMUST00000029139 Ppp1r1bQ60829 194 aa13.64□□□□□ -0.23
Trim55-201ENSMUST00000029139 Kif18aQ91WD7 886 aa13.64□□□□□ -0.23
Trim55-201ENSMUST00000029139 Tfip11Q9ERA6 838 aaKnown RBP13.64□□□□□ -0.23
Trim55-201ENSMUST00000029139 Btn2a2A4QPC6 514 aa13.63□□□□□ -0.23
Trim55-201ENSMUST00000029139 Fnbp4Q6ZQ03 1031 aa13.63□□□□□ -0.23
Trim55-201ENSMUST00000029139 Themis2Q91YX0 663 aa13.63□□□□□ -0.23
Trim55-201ENSMUST00000029139 Med4Q9CQA5 270 aa13.63□□□□□ -0.23
Trim55-201ENSMUST00000029139 Pik3c2aQ61194 1686 aa13.63□□□□□ -0.23
Trim55-201ENSMUST00000029139 Fam135bQ9DAI6 1403 aa13.63□□□□□ -0.23
Trim55-201ENSMUST00000029139 Map9Q3TRR0 646 aa13.63□□□□□ -0.23
Trim55-201ENSMUST00000029139 Def6Q8C2K1 630 aa13.63□□□□□ -0.23
Trim55-201ENSMUST00000029139 Calcoco1Q8CGU1 691 aa13.63□□□□□ -0.23
Trim55-201ENSMUST00000029139 Card11Q8CIS0 1159 aa13.63□□□□□ -0.23
Trim55-201ENSMUST00000029139 Cdk13Q69ZA1 1511 aaKnown RBP13.62□□□□□ -0.23
Trim55-201ENSMUST00000029139 Exoc6bA6H5Z3 810 aa13.62□□□□□ -0.23
Trim55-201ENSMUST00000029139 Tpm4Q6IRU2 248 aa13.62□□□□□ -0.23
Trim55-201ENSMUST00000029139 Pnpla2Q8BJ56 486 aa13.62□□□□□ -0.23
Trim55-201ENSMUST00000029139 Coro7Q9D2V7 922 aa13.62□□□□□ -0.23
Trim55-201ENSMUST00000029139 Odf2lQ9D478 642 aa13.62□□□□□ -0.23
Trim55-201ENSMUST00000029139 Ankrd26Q811D2 1581 aa13.62□□□□□ -0.23
Trim55-201ENSMUST00000029139 Ccdc178Q8CDV0 866 aa13.62□□□□□ -0.23
Trim55-201ENSMUST00000029139 Eif2b5Q8CHW4 717 aa13.62□□□□□ -0.23
Trim55-201ENSMUST00000029139 Tubgcp6G5E8P0 1769 aa13.62□□□□□ -0.23
Trim55-201ENSMUST00000029139 AW822073A0A0N4SUK1 652 aa13.61□□□□□ -0.23
Trim55-201ENSMUST00000029139 Cwc27Q3TKY6 469 aa13.61□□□□□ -0.23
Trim55-201ENSMUST00000029139 Cct8l1Q80YT3 562 aa13.61□□□□□ -0.23
Trim55-201ENSMUST00000029139 RictorQ6QI06 1708 aa13.61□□□□□ -0.23
Trim55-201ENSMUST00000029139 Pik3c2gO70167 1506 aa13.61□□□□□ -0.23
Trim55-201ENSMUST00000029139 Naif1Q6PFD7 327 aa13.61□□□□□ -0.23
Trim55-201ENSMUST00000029139 Lonp2Q9DBN5 852 aa13.61□□□□□ -0.23
Trim55-201ENSMUST00000029139 Utp3Q9JI13 469 aaKnown RBP13.61□□□□□ -0.23
Trim55-201ENSMUST00000029139 KdrP35918 1367 aa13.6□□□□□ -0.23
Trim55-201ENSMUST00000029139 Cfap74Q3UY96 1578 aa13.6□□□□□ -0.23
Trim55-201ENSMUST00000029139 Trpm2Q91YD4 1506 aa13.6□□□□□ -0.23
Trim55-201ENSMUST00000029139 Znf568E9PYI1 671 aa13.6□□□□□ -0.23
Trim55-201ENSMUST00000029139 Zdhhc9P59268 364 aa13.6□□□□□ -0.23
Trim55-201ENSMUST00000029139 Lig3P97386 1015 aa13.6□□□□□ -0.23
Trim55-201ENSMUST00000029139 Fmnl3Q6ZPF4 1028 aa13.6□□□□□ -0.23
Trim55-201ENSMUST00000029139 Apbb1ipQ8R5A3 670 aa13.6□□□□□ -0.23
Trim55-201ENSMUST00000029139 Fam208aQ69ZR9 1610 aaKnown RBP13.59□□□□□ -0.23
Trim55-201ENSMUST00000029139 Zscan20B2KFW1 1030 aa13.59□□□□□ -0.23
Trim55-201ENSMUST00000029139 FntaQ61239 377 aa13.59□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 53.8 ms