RNA–Protein interactions for RNA: ENSMUST00000027988.7

Ccdc3-201, Transcript of Coiled-coil domain-containing protein 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc3, Length 2,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3-201ENSMUST00000027988 Trpm3Q5F4S9 1721 aa22.55■■□□□ 1.2
Ccdc3-201ENSMUST00000027988 Cwc27Q3TKY6 469 aa22.55■■□□□ 1.2
Ccdc3-201ENSMUST00000027988 Gm10563F6WIE4 79 aa22.54■■□□□ 1.2
Ccdc3-201ENSMUST00000027988 Hoxc9P09633 260 aa22.54■■□□□ 1.2
Ccdc3-201ENSMUST00000027988 Disp3A3KFU9 1347 aa22.54■■□□□ 1.2
Ccdc3-201ENSMUST00000027988 Myo5bP21271 1818 aa22.54■■□□□ 1.2
Ccdc3-201ENSMUST00000027988 Ap3b2Q9JME5 1082 aa22.54■■□□□ 1.2
Ccdc3-201ENSMUST00000027988 Igsf1Q7TQA1 1317 aa22.54■■□□□ 1.2
Ccdc3-201ENSMUST00000027988 Arap3Q8R5G7 1538 aa22.53■■□□□ 1.2
Ccdc3-201ENSMUST00000027988 Gtf2a1Q99PM3 378 aa22.53■■□□□ 1.2
Ccdc3-201ENSMUST00000027988 Pnpla7A2AJ88 1352 aa22.53■■□□□ 1.2
Ccdc3-201ENSMUST00000027988 C5P06684 1680 aa22.52■■□□□ 1.2
Ccdc3-201ENSMUST00000027988 Tpx2A2APB8 745 aaKnown RBP22.52■■□□□ 1.2
Ccdc3-201ENSMUST00000027988 Isy1Q69ZQ2 285 aaKnown RBP22.52■■□□□ 1.2
Ccdc3-201ENSMUST00000027988 Mrps27Q8BK72 415 aaKnown RBP22.52■■□□□ 1.2
Ccdc3-201ENSMUST00000027988 Als2Q920R0 1651 aa22.52■■□□□ 1.2
Ccdc3-201ENSMUST00000027988 Atp8b2P98199 1209 aa22.51■■□□□ 1.19
Ccdc3-201ENSMUST00000027988 Zkscan2G3X952 960 aa22.51■■□□□ 1.19
Ccdc3-201ENSMUST00000027988 Mon2Q80TL7 1715 aa22.5■■□□□ 1.19
Ccdc3-201ENSMUST00000027988 Ptpn23Q6PB44 1692 aa22.5■■□□□ 1.19
Ccdc3-201ENSMUST00000027988 Vwa3bJ9JI28 736 aa22.5■■□□□ 1.19
Ccdc3-201ENSMUST00000027988 Gadd45bP22339 160 aa22.5■■□□□ 1.19
Ccdc3-201ENSMUST00000027988 Phactr2B1AVP0 632 aa22.49■■□□□ 1.19
Ccdc3-201ENSMUST00000027988 Atf5O70191 283 aa22.49■■□□□ 1.19
Ccdc3-201ENSMUST00000027988 Mum1Q6DID5 682 aa22.49■■□□□ 1.19
Ccdc3-201ENSMUST00000027988 Safb2Q80YR5 991 aaKnown RBP22.49■■□□□ 1.19
Ccdc3-201ENSMUST00000027988 Zfp777B9EKF4 885 aa22.47■■□□□ 1.19
Ccdc3-201ENSMUST00000027988 Rnf123Q5XPI3 1314 aa22.47■■□□□ 1.19
Ccdc3-201ENSMUST00000027988 Tlr7P58681 1050 aa22.47■■□□□ 1.19
Ccdc3-201ENSMUST00000027988 Nkx2-3P97334 362 aa22.47■■□□□ 1.19
Ccdc3-201ENSMUST00000027988 NexnQ7TPW1 607 aa22.47■■□□□ 1.19
Ccdc3-201ENSMUST00000027988 Hsp90b1P08113 802 aaKnown RBP22.46■■□□□ 1.19
Ccdc3-201ENSMUST00000027988 Arhgef1Q61210 920 aaKnown RBP22.46■■□□□ 1.19
Ccdc3-201ENSMUST00000027988 Arfgef2A2A5R2 1792 aa22.46■■□□□ 1.19
Ccdc3-201ENSMUST00000027988 Nol8Q3UHX0 1147 aaKnown RBP22.46■■□□□ 1.19
Ccdc3-201ENSMUST00000027988 Cpa2Q504N0 417 aa22.46■■□□□ 1.19
Ccdc3-201ENSMUST00000027988 Amotl2Q8K371 772 aa22.45■■□□□ 1.19
Ccdc3-201ENSMUST00000027988 HypkQ9CR41 129 aa22.45■■□□□ 1.19
Ccdc3-201ENSMUST00000027988 Tmem94Q7TSH8 1360 aa22.45■■□□□ 1.18
Ccdc3-201ENSMUST00000027988 Trim44Q9QXA7 346 aa22.45■■□□□ 1.18
Ccdc3-201ENSMUST00000027988 Mcmdc2E9Q956 681 aa22.44■■□□□ 1.18
Ccdc3-201ENSMUST00000027988 Unc5clQ6R653 518 aa22.44■■□□□ 1.18
Ccdc3-201ENSMUST00000027988 Stk36Q69ZM6 1316 aa22.44■■□□□ 1.18
Ccdc3-201ENSMUST00000027988 ImpactO55091 318 aa22.43■■□□□ 1.18
Ccdc3-201ENSMUST00000027988 PogkQ80TC5 607 aa22.43■■□□□ 1.18
Ccdc3-201ENSMUST00000027988 EvcP57680 1005 aa22.43■■□□□ 1.18
Ccdc3-201ENSMUST00000027988 Pmfbp1Q9WVQ0 1022 aa22.43■■□□□ 1.18
Ccdc3-201ENSMUST00000027988 4931400O07RikQ9D4M5 137 aa22.42■■□□□ 1.18
Ccdc3-201ENSMUST00000027988 Jakmip1Q8BVL9 626 aa22.42■■□□□ 1.18
Ccdc3-201ENSMUST00000027988 Nol11Q8BJW5 723 aaKnown RBP22.41■■□□□ 1.18
Ccdc3-201ENSMUST00000027988 LlphQ9D945 130 aaKnown RBP22.41■■□□□ 1.18
Ccdc3-201ENSMUST00000027988 Zap70P43404 618 aa22.41■■□□□ 1.18
Ccdc3-201ENSMUST00000027988 Gm45015A0A140LII9 184 aa22.4■■□□□ 1.18
Ccdc3-201ENSMUST00000027988 Gm18336A0A140LIU8 765 aa22.4■■□□□ 1.18
Ccdc3-201ENSMUST00000027988 Dhx16G3X8X0 1044 aaKnown RBP22.4■■□□□ 1.18
Ccdc3-201ENSMUST00000027988 Mlh1Q9JK91 760 aa22.4■■□□□ 1.18
Ccdc3-201ENSMUST00000027988 Syce3B5KM66 88 aa22.4■■□□□ 1.18
Ccdc3-201ENSMUST00000027988 Ier5O89113 308 aa22.4■■□□□ 1.18
Ccdc3-201ENSMUST00000027988 Rbm27Q5SFM8 1060 aaKnown RBP22.4■■□□□ 1.18
Ccdc3-201ENSMUST00000027988 Dlg5E9Q9R9 1921 aa22.39■■□□□ 1.17
Ccdc3-201ENSMUST00000027988 Fyb1O35601 819 aa22.39■■□□□ 1.17
Ccdc3-201ENSMUST00000027988 PtmaP26350 111 aa22.39■■□□□ 1.17
Ccdc3-201ENSMUST00000027988 Map3k13Q1HKZ5 959 aa22.38■■□□□ 1.17
Ccdc3-201ENSMUST00000027988 Stk3Q9JI10 497 aa22.38■■□□□ 1.17
Ccdc3-201ENSMUST00000027988 Exoc6bA6H5Z3 810 aa22.38■■□□□ 1.17
Ccdc3-201ENSMUST00000027988 CoilQ5SU73 570 aa22.38■■□□□ 1.17
Ccdc3-201ENSMUST00000027988 Nol12Q8BG17 217 aa22.38■■□□□ 1.17
Ccdc3-201ENSMUST00000027988 ScaperF8VQ70 1398 aaKnown RBP22.38■■□□□ 1.17
Ccdc3-201ENSMUST00000027988 E4f1Q8CCE9 783 aa22.37■■□□□ 1.17
Ccdc3-201ENSMUST00000027988 Slx4ipQ9D7Y9 413 aa22.37■■□□□ 1.17
Ccdc3-201ENSMUST00000027988 Ms4a2P20490 235 aa22.36■■□□□ 1.17
Ccdc3-201ENSMUST00000027988 Eif4a1P60843 406 aaKnown RBP22.36■■□□□ 1.17
Ccdc3-201ENSMUST00000027988 Slc4a10Q5DTL9 1118 aa22.36■■□□□ 1.17
Ccdc3-201ENSMUST00000027988 Pdzrn3Q69ZS0 1063 aa22.36■■□□□ 1.17
Ccdc3-201ENSMUST00000027988 Rrp9Q91WM3 475 aaKnown RBP22.36■■□□□ 1.17
Ccdc3-201ENSMUST00000027988 Erich6bQ9D4S6 220 aa22.36■■□□□ 1.17
Ccdc3-201ENSMUST00000027988 Bcl2l13P59017 434 aa22.35■■□□□ 1.17
Ccdc3-201ENSMUST00000027988 Fkbp4P30416 458 aa22.35■■□□□ 1.17
Ccdc3-201ENSMUST00000027988 Elmsan1E9Q2I4 1089 aaKnown RBP22.34■■□□□ 1.17
Ccdc3-201ENSMUST00000027988 Nup153E9Q3G8 1462 aaKnown RBP22.34■■□□□ 1.17
Ccdc3-201ENSMUST00000027988 EspnlQ3UYR4 1005 aa22.34■■□□□ 1.17
Ccdc3-201ENSMUST00000027988 Zbtb45Q52KG4 520 aa22.34■■□□□ 1.17
Ccdc3-201ENSMUST00000027988 Filip1lQ6P6L0 1131 aa22.34■■□□□ 1.17
Ccdc3-201ENSMUST00000027988 Rnf214Q8BFU3 668 aaKnown RBP22.34■■□□□ 1.17
Ccdc3-201ENSMUST00000027988 Bend3Q6PAL0 825 aa22.34■■□□□ 1.17
Ccdc3-201ENSMUST00000027988 AnlnQ8K298 1121 aaKnown RBP22.34■■□□□ 1.17
Ccdc3-201ENSMUST00000027988 C3P01027 1663 aa22.33■■□□□ 1.17
Ccdc3-201ENSMUST00000027988 Tgfb1i1Q62219 461 aa22.33■■□□□ 1.17
Ccdc3-201ENSMUST00000027988 Cnksr1A2A9K7 700 aa22.32■■□□□ 1.16
Ccdc3-201ENSMUST00000027988 Adcy9P51830 1353 aa22.32■■□□□ 1.16
Ccdc3-201ENSMUST00000027988 MccE9PWI3 1003 aa22.31■■□□□ 1.16
Ccdc3-201ENSMUST00000027988 Pa2g4P50580 394 aaKnown RBP22.31■■□□□ 1.16
Ccdc3-201ENSMUST00000027988 Anapc15P60007 132 aa22.31■■□□□ 1.16
Ccdc3-201ENSMUST00000027988 Ano8Q6PB70 1060 aa22.31■■□□□ 1.16
Ccdc3-201ENSMUST00000027988 Pank2Q3U4S0 443 aa22.3■■□□□ 1.16
Ccdc3-201ENSMUST00000027988 Utp18Q5SSI6 552 aaKnown RBP22.3■■□□□ 1.16
Ccdc3-201ENSMUST00000027988 F2rP30558 430 aa22.3■■□□□ 1.16
Ccdc3-201ENSMUST00000027988 Cfdp1O88271 295 aaKnown RBP22.29■■□□□ 1.16
Ccdc3-201ENSMUST00000027988 Mphosph10Q810V0 681 aaKnown RBP22.29■■□□□ 1.16
Ccdc3-201ENSMUST00000027988 Naa30Q8CES0 364 aa22.29■■□□□ 1.16
Retrieved 100 of 22,080 RNA–protein pairs in 29.4 ms