RNA–Protein interactions for RNA: ENSMUST00000023352.8

Prkdc-201, Transcript of DNA-dependent protein kinase catalytic subunit, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Prkdc, Length 12,647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prkdc-201ENSMUST00000023352 Ccdc38Q8CDN8 563 aa5.37□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Grpel1Q99LP6 217 aa5.37□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Prr29B1ARI9 187 aa5.37□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Birc3O08863 600 aa5.37□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Abca17E9PX95 1733 aa5.37□□□□□ -1.55
Prkdc-201ENSMUST00000023352 LifrP42703 1092 aa5.37□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Strn4P58404 760 aa5.37□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Dpf1Q9QX66 387 aa5.37□□□□□ -1.55
Prkdc-201ENSMUST00000023352 PzpQ61838 1495 aa5.37□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Prl7d1P04769 244 aa5.37□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Kiaa0753Q6A000 959 aa5.37□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Mum1Q6DID5 682 aa5.37□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Ddx46Q569Z5 1032 aaKnown RBP5.37□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Podxl2Q8CAE9 603 aa5.37□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Liat1Q810M6 228 aa5.36□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Rec8Q8C5S7 591 aa5.36□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Ino80Q6ZPV2 1559 aa5.36□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Myo5cE9Q1F5 1742 aa5.36□□□□□ -1.55
Prkdc-201ENSMUST00000023352 CastP51125 788 aa5.36□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Aldh8a1Q8BH00 487 aa5.36□□□□□ -1.55
Prkdc-201ENSMUST00000023352 CarsQ9ER72 831 aaKnown RBP5.36□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Rcan3Q9JKK0 239 aa5.36□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Chmp3Q9CQ10 224 aa5.36□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Irx6Q9ER75 438 aa5.36□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Ankrd50F7BE84 1390 aa5.36□□□□□ -1.55
Prkdc-201ENSMUST00000023352 TkfcQ8VC30 578 aa5.36□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Ccdc39Q9D5Y1 937 aa5.36□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Zkscan5Q9Z1D8 819 aa5.36□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Wdr63B2RY71 923 aa5.36□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Cyp46a1Q9WVK8 500 aa5.36□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Tbc1d32Q3URV1 1296 aa5.36□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Ccdc114Q3UX62 658 aa5.36□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Armcx1Q9CX83 456 aa5.36□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Znf704Q9ERQ3 566 aa5.36□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Gm44503E9PYU5 387 aa5.36□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Mis12Q9CY25 206 aa5.36□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Kdm6bQ5NCY0 1641 aa5.35□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Med14A2ABV5 1459 aaKnown RBP5.35□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Mcm5P49718 733 aa5.35□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Iqgap3F8VQ29 1632 aa5.35□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Kdm3aQ6PCM1 1323 aa5.35□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Sv2bQ8BG39 683 aa5.35□□□□□ -1.55
Prkdc-201ENSMUST00000023352 GphnQ8BUV3 769 aaKnown RBP5.35□□□□□ -1.55
Prkdc-201ENSMUST00000023352 March6Q6ZQ89 909 aa5.35□□□□□ -1.55
Prkdc-201ENSMUST00000023352 GorabQ8BRM2 368 aa5.35□□□□□ -1.55
Prkdc-201ENSMUST00000023352 AglF8VPN4 1532 aa5.35□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Idi2Q8BFZ6 227 aa5.35□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Acbd3Q8BMP6 525 aa5.35□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Smc1bQ920F6 1248 aa5.35□□□□□ -1.55
Prkdc-201ENSMUST00000023352 L3mbtl2P59178 703 aa5.35□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Usp16Q99LG0 825 aa5.35□□□□□ -1.55
Prkdc-201ENSMUST00000023352 TxlnaQ6PAM1 554 aaKnown RBP5.35□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Uhrf1bp1B2KF50 1429 aa5.35□□□□□ -1.55
Prkdc-201ENSMUST00000023352 DnmbpQ6TXD4 1580 aa5.35□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Rfx1P48377 963 aa5.35□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Pmfbp1Q9WVQ0 1022 aa5.35□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Topbp1Q6ZQF0 1515 aa5.35□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Stim1P70302 685 aa5.35□□□□□ -1.55
Prkdc-201ENSMUST00000023352 ShprhQ7TPQ3 1674 aa5.35□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Gnai2P08752 355 aaKnown RBP5.35□□□□□ -1.55
Prkdc-201ENSMUST00000023352 AcrbpQ3V140 540 aa5.35□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Kiaa1211Q5PR69 1207 aa5.35□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Znf653Q6YND2 615 aa5.35□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Chmp7Q8R1T1 451 aa5.34□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Q7TT23 1179 aa5.34□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Cetn2Q9R1K9 172 aa5.34□□□□□ -1.55
Prkdc-201ENSMUST00000023352 NpatQ8BMA5 1420 aa5.34□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Adamts7Q68SA9 1657 aa5.34□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Cfap157Q0VFX2 523 aa5.34□□□□□ -1.55
Prkdc-201ENSMUST00000023352 KarsQ99MN1 595 aaKnown RBP5.34□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Stk11ipQ3TAA7 1072 aa5.34□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Cfap53Q9D439 514 aa5.34□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Cdc42bpbQ7TT50 1713 aa5.34□□□□□ -1.55
Prkdc-201ENSMUST00000023352 1700019A02RikA0A087WPV9 146 aa5.34□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Brd2Q7JJ13 798 aaKnown RBP5.34□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Ric3Q8BPM6 367 aa5.34□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Plekhd1B2RPU2 505 aa5.34□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Cct4P80315 539 aaKnown RBP5.34□□□□□ -1.55
Prkdc-201ENSMUST00000023352 Fmnl2A2APV2 1086 aa5.34□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Gm10093D3YYI8 482 aa5.34□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Hdac1O09106 482 aaKnown RBP5.34□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Skap1Q3UUV5 355 aa5.34□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Bag1Q60739 355 aa5.34□□□□□ -1.56
Prkdc-201ENSMUST00000023352 CactinQ9CS00 772 aaKnown RBP5.34□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Ccdc121E9Q6D3 323 aa5.34□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Zcchc11B2RX14 1644 aaKnown RBP5.34□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Kif18aQ91WD7 886 aa5.34□□□□□ -1.56
Prkdc-201ENSMUST00000023352 4931400O07RikQ9D4M5 137 aa5.34□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Sept14Q9DA97 430 aa5.34□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Ttc21aQ8C0S4 1314 aa5.34□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Zfp251Q6PCX8 632 aa5.33□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Smc3Q9CW03 1217 aaKnown RBP5.33□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Znf287Q9EQB9 759 aa5.33□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Brpf1B2RRD7 1212 aa5.33□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Stk26Q99JT2 416 aa5.33□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Adgrl1Q80TR1 1466 aa5.33□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Map7d1A2AJI0 846 aa5.33□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Eif3dO70194 548 aaKnown RBP5.33□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Cabp4Q8VHC5 271 aa5.33□□□□□ -1.56
Prkdc-201ENSMUST00000023352 Knl1Q66JQ7 1612 aa5.33□□□□□ -1.56
Retrieved 100 of 22,080 RNA–protein pairs in 10.2 ms